PY17X_1016000 | plasmepsin IX, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:  GO:0020008      

  • Curated_GO_Components:  rhoptry      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PY17X_1016000OTHER0.9308900.0577550.011355
No Results

  • Fasta :-

    >PY17X_1016000 MFFLTLKKLRKKYFLLFLTHPTITTLFFIYIFNLVKSDYPNFNKNKYNLPSLKKNQKYFK QKIQPCNSCINCSICIHENGEPQNILPLVAIPSKRHYFYEQDMSKNSNLNGSPVKNKRED SIKFDRNYSQKELNKKNKKNYNFIENHIAMSNINNDITDGDRETEDGLNQENIAKDNFNN LISSYENIYNQKTEHSIDNKVILPLQQLQDSQYVGSIQIGNPPQTIKPIFDTGSTNIWVV STKCRDKTCLKVHRYNHKLSNTFKYYSPRTNLDIMFGTGIIQGTIGIDTFKIGPFKIENQ SFGLVKREKGSNKKSNVFERINFEGIIGLAFPTMLSTGGNPIYENLMASYNFPHNEFSIY IGMDNKYSALIFGGVEKKFFEGDIYMFPVVREYYWEIKFDGLYIDHQKFCCDSGSIVYDL KMKDKNKNEKNYFIRKYFNKHHFNHKKMWLRNNHHTKHWKREKHFKPLSSNENYLIFDSG TSFNSVPKSEIKYFFKVVPPKKCDANNIDEVIDSYPNLTYVINNMPFTLTPSQYLIRKHN MCKPAFMDIEVSPEYGHAYILGNATFMKHYYTVYRRGKGNNNSYVGIARAAHTKENAEYL NSLHKERMEDEE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1016000.fa Sequence name : PY17X_1016000 Sequence length : 612 VALUES OF COMPUTED PARAMETERS Coef20 : 4.495 CoefTot : -3.603 ChDiff : 23 ZoneTo : 77 KR : 13 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.965 1.659 0.196 0.711 MesoH : -0.367 0.189 -0.396 0.296 MuHd_075 : 25.749 16.765 8.039 5.538 MuHd_095 : 28.785 21.877 9.544 7.094 MuHd_100 : 29.972 24.923 11.821 7.286 MuHd_105 : 31.095 25.645 12.831 6.892 Hmax_075 : 6.883 20.500 2.092 5.962 Hmax_095 : -3.675 11.800 -0.094 4.130 Hmax_100 : 0.300 10.400 0.997 2.300 Hmax_105 : -3.500 15.517 4.862 0.858 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2035 0.7965 DFMC : 0.1181 0.8819 This protein is probably imported in mitochondria. f(Ser) = 0.0519 f(Arg) = 0.0130 CMi = 0.58910 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 612 PY17X_1016000 MFFLTLKKLRKKYFLLFLTHPTITTLFFIYIFNLVKSDYPNFNKNKYNLPSLKKNQKYFKQKIQPCNSCINCSICIHENG 80 EPQNILPLVAIPSKRHYFYEQDMSKNSNLNGSPVKNKREDSIKFDRNYSQKELNKKNKKNYNFIENHIAMSNINNDITDG 160 DRETEDGLNQENIAKDNFNNLISSYENIYNQKTEHSIDNKVILPLQQLQDSQYVGSIQIGNPPQTIKPIFDTGSTNIWVV 240 STKCRDKTCLKVHRYNHKLSNTFKYYSPRTNLDIMFGTGIIQGTIGIDTFKIGPFKIENQSFGLVKREKGSNKKSNVFER 320 INFEGIIGLAFPTMLSTGGNPIYENLMASYNFPHNEFSIYIGMDNKYSALIFGGVEKKFFEGDIYMFPVVREYYWEIKFD 400 GLYIDHQKFCCDSGSIVYDLKMKDKNKNEKNYFIRKYFNKHHFNHKKMWLRNNHHTKHWKREKHFKPLSSNENYLIFDSG 480 TSFNSVPKSEIKYFFKVVPPKKCDANNIDEVIDSYPNLTYVINNMPFTLTPSQYLIRKHNMCKPAFMDIEVSPEYGHAYI 560 LGNATFMKHYYTVYRRGKGNNNSYVGIARAAHTKENAEYLNSLHKERMEDEE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1016000 7 MFFLTLK|KL 0.058 . PY17X_1016000 8 FFLTLKK|LR 0.069 . PY17X_1016000 10 LTLKKLR|KK 0.079 . PY17X_1016000 11 TLKKLRK|KY 0.086 . PY17X_1016000 12 LKKLRKK|YF 0.097 . PY17X_1016000 36 YIFNLVK|SD 0.069 . PY17X_1016000 44 DYPNFNK|NK 0.055 . PY17X_1016000 46 PNFNKNK|YN 0.073 . PY17X_1016000 53 YNLPSLK|KN 0.066 . PY17X_1016000 54 NLPSLKK|NQ 0.065 . PY17X_1016000 57 SLKKNQK|YF 0.071 . PY17X_1016000 60 KNQKYFK|QK 0.069 . PY17X_1016000 62 QKYFKQK|IQ 0.062 . PY17X_1016000 94 LVAIPSK|RH 0.061 . PY17X_1016000 95 VAIPSKR|HY 0.244 . PY17X_1016000 105 YEQDMSK|NS 0.057 . PY17X_1016000 115 LNGSPVK|NK 0.057 . PY17X_1016000 117 GSPVKNK|RE 0.066 . PY17X_1016000 118 SPVKNKR|ED 0.266 . PY17X_1016000 123 KREDSIK|FD 0.068 . PY17X_1016000 126 DSIKFDR|NY 0.125 . PY17X_1016000 131 DRNYSQK|EL 0.080 . PY17X_1016000 135 SQKELNK|KN 0.060 . PY17X_1016000 136 QKELNKK|NK 0.087 . PY17X_1016000 138 ELNKKNK|KN 0.076 . PY17X_1016000 139 LNKKNKK|NY 0.115 . PY17X_1016000 162 DITDGDR|ET 0.100 . PY17X_1016000 175 NQENIAK|DN 0.078 . PY17X_1016000 192 ENIYNQK|TE 0.060 . PY17X_1016000 200 EHSIDNK|VI 0.063 . PY17X_1016000 227 NPPQTIK|PI 0.078 . PY17X_1016000 243 IWVVSTK|CR 0.063 . PY17X_1016000 245 VVSTKCR|DK 0.125 . PY17X_1016000 247 STKCRDK|TC 0.058 . PY17X_1016000 251 RDKTCLK|VH 0.053 . PY17X_1016000 254 TCLKVHR|YN 0.122 . PY17X_1016000 258 VHRYNHK|LS 0.064 . PY17X_1016000 264 KLSNTFK|YY 0.089 . PY17X_1016000 269 FKYYSPR|TN 0.110 . PY17X_1016000 291 IGIDTFK|IG 0.058 . PY17X_1016000 296 FKIGPFK|IE 0.064 . PY17X_1016000 306 QSFGLVK|RE 0.059 . PY17X_1016000 307 SFGLVKR|EK 0.209 . PY17X_1016000 309 GLVKREK|GS 0.071 . PY17X_1016000 313 REKGSNK|KS 0.067 . PY17X_1016000 314 EKGSNKK|SN 0.118 . PY17X_1016000 320 KSNVFER|IN 0.160 . PY17X_1016000 366 YIGMDNK|YS 0.064 . PY17X_1016000 377 IFGGVEK|KF 0.065 . PY17X_1016000 378 FGGVEKK|FF 0.128 . PY17X_1016000 391 YMFPVVR|EY 0.081 . PY17X_1016000 398 EYYWEIK|FD 0.072 . PY17X_1016000 408 LYIDHQK|FC 0.073 . PY17X_1016000 421 SIVYDLK|MK 0.064 . PY17X_1016000 423 VYDLKMK|DK 0.073 . PY17X_1016000 425 DLKMKDK|NK 0.064 . PY17X_1016000 427 KMKDKNK|NE 0.059 . PY17X_1016000 430 DKNKNEK|NY 0.065 . PY17X_1016000 435 EKNYFIR|KY 0.105 . PY17X_1016000 436 KNYFIRK|YF 0.097 . PY17X_1016000 440 IRKYFNK|HH 0.082 . PY17X_1016000 446 KHHFNHK|KM 0.062 . PY17X_1016000 447 HHFNHKK|MW 0.134 . PY17X_1016000 451 HKKMWLR|NN 0.101 . PY17X_1016000 457 RNNHHTK|HW 0.096 . PY17X_1016000 460 HHTKHWK|RE 0.060 . PY17X_1016000 461 HTKHWKR|EK 0.205 . PY17X_1016000 463 KHWKREK|HF 0.065 . PY17X_1016000 466 KREKHFK|PL 0.112 . PY17X_1016000 488 SFNSVPK|SE 0.090 . PY17X_1016000 492 VPKSEIK|YF 0.075 . PY17X_1016000 496 EIKYFFK|VV 0.074 . PY17X_1016000 501 FKVVPPK|KC 0.071 . PY17X_1016000 502 KVVPPKK|CD 0.089 . PY17X_1016000 537 PSQYLIR|KH 0.086 . PY17X_1016000 538 SQYLIRK|HN 0.083 . PY17X_1016000 543 RKHNMCK|PA 0.079 . PY17X_1016000 568 GNATFMK|HY 0.083 . PY17X_1016000 575 HYYTVYR|RG 0.078 . PY17X_1016000 576 YYTVYRR|GK 0.138 . PY17X_1016000 578 TVYRRGK|GN 0.152 . PY17X_1016000 589 SYVGIAR|AA 0.163 . PY17X_1016000 594 ARAAHTK|EN 0.081 . PY17X_1016000 605 YLNSLHK|ER 0.061 . PY17X_1016000 607 NSLHKER|ME 0.102 . ____________________________^_________________

  • Fasta :-

    >PY17X_1016000 ATGTTTTTTTTAACTTTAAAAAAATTAAGAAAAAAATATTTTTTGTTATTTTTAACACAC CCAACGATAACAACATTATTTTTTATTTACATTTTTAATCTTGTTAAAAGTGATTATCCA AATTTTAATAAAAATAAATATAATTTACCTTCTTTAAAAAAAAATCAGAAATATTTTAAA CAAAAGATACAACCATGTAACTCTTGTATAAATTGTTCTATTTGCATTCATGAAAATGGA GAGCCACAGAATATTCTTCCCTTGGTAGCGATACCAAGTAAAAGGCATTATTTTTATGAA CAAGACATGTCAAAAAATAGTAATTTAAATGGTTCTCCAGTTAAAAATAAAAGAGAAGAT TCTATAAAGTTCGATAGAAATTATTCTCAAAAAGAATTAAATAAAAAAAATAAAAAAAAT TATAATTTTATTGAAAATCATATTGCAATGTCAAATATAAATAATGATATTACGGATGGA GATAGAGAAACTGAAGATGGTTTGAATCAAGAAAATATTGCTAAAGATAATTTTAACAAT TTAATATCAAGTTATGAAAATATATATAATCAGAAAACGGAACATTCGATAGACAATAAA GTCATTTTACCCTTACAACAGCTACAAGATAGTCAATATGTTGGGTCCATTCAAATAGGA AACCCGCCTCAAACAATCAAACCTATTTTCGATACTGGAAGCACGAATATATGGGTTGTT AGCACTAAATGTAGAGACAAAACATGTTTAAAGGTGCATCGATATAATCACAAACTATCC AATACTTTTAAATATTATAGCCCACGGACTAATTTAGATATTATGTTTGGAACCGGAATA ATTCAGGGAACTATTGGAATCGATACTTTCAAGATCGGTCCATTTAAAATTGAAAATCAA TCTTTTGGGTTAGTAAAACGTGAAAAAGGAAGTAATAAAAAATCCAATGTTTTTGAAAGA ATAAATTTTGAAGGAATTATTGGGTTAGCATTTCCTACAATGCTTTCTACTGGTGGTAAT CCAATATATGAAAATTTAATGGCTAGTTATAATTTTCCACATAATGAATTTTCAATATAT ATTGGAATGGATAATAAATATTCAGCTTTAATTTTTGGTGGAGTTGAAAAAAAATTTTTC GAAGGAGATATATATATGTTTCCAGTTGTAAGAGAATATTATTGGGAAATAAAATTTGAT GGGCTATATATAGATCATCAAAAATTTTGTTGTGATAGTGGTTCAATTGTTTACGATTTA AAAATGAAAGATAAAAATAAAAATGAAAAAAATTATTTCATACGAAAATATTTTAATAAA CATCATTTCAATCATAAAAAAATGTGGTTACGAAATAATCATCATACTAAACATTGGAAA AGGGAAAAACATTTCAAACCCTTGAGTTCCAATGAAAATTATTTAATATTCGACTCTGGA ACTTCCTTTAATAGTGTTCCTAAGTCGGAAATAAAATATTTTTTTAAAGTTGTCCCTCCC AAGAAATGCGATGCTAATAACATTGACGAAGTTATAGATAGCTACCCAAACTTAACCTAT GTCATCAACAATATGCCCTTTACATTGACACCATCTCAATATTTGATTCGAAAACACAAT ATGTGCAAACCAGCATTTATGGATATTGAAGTTTCTCCAGAATATGGGCATGCATACATT TTAGGAAATGCAACATTCATGAAACATTATTATACTGTCTATAGACGAGGGAAGGGCAAT AATAATTCATATGTTGGAATAGCTAGAGCTGCACATACGAAGGAAAATGCAGAATATTTG AATTCGCTACACAAGGAAAGAATGGAAGATGAAGAATAA
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  • Fasta :-

    MFFLTLKKLRKKYFLLFLTHPTITTLFFIYIFNLVKSDYPNFNKNKYNLPSLKKNQKYFK QKIQPCNSCINCSICIHENGEPQNILPLVAIPSKRHYFYEQDMSKNSNLNGSPVKNKRED SIKFDRNYSQKELNKKNKKNYNFIENHIAMSNINNDITDGDRETEDGLNQENIAKDNFNN LISSYENIYNQKTEHSIDNKVILPLQQLQDSQYVGSIQIGNPPQTIKPIFDTGSTNIWVV STKCRDKTCLKVHRYNHKLSNTFKYYSPRTNLDIMFGTGIIQGTIGIDTFKIGPFKIENQ SFGLVKREKGSNKKSNVFERINFEGIIGLAFPTMLSTGGNPIYENLMASYNFPHNEFSIY IGMDNKYSALIFGGVEKKFFEGDIYMFPVVREYYWEIKFDGLYIDHQKFCCDSGSIVYDL KMKDKNKNEKNYFIRKYFNKHHFNHKKMWLRNNHHTKHWKREKHFKPLSSNENYLIFDSG TSFNSVPKSEIKYFFKVVPPKKCDANNIDEVIDSYPNLTYVINNMPFTLTPSQYLIRKHN MCKPAFMDIEVSPEYGHAYILGNATFMKHYYTVYRRGKGNNNSYVGIARAAHTKENAEYL NSLHKERMEDEE

  • title: catalytic residue
  • coordinates: D231,D478
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1016000121 SKREDSIKFD0.996unspPY17X_1016000129 SDRNYSQKEL0.996unsp
PY17X_1016000


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India