PY17X_1107600 | rhomboid protease ROM4, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PY17X_1107600OTHER0.9999850.0000040.000011
No Results

  • Fasta :-

    >PY17X_1107600 METNKSKKAIVNSKKNEALHELVDDTAKKGVKSPPWINKGNQVKKANIPGDPKNSNALKK EAPGNPNLVEKGIVGVPKKPPTNTGKTSAKSDPKSGPKKDTKNDVKNDPKSVPKSDPKSV PKNDPKNDVKNDVKNGVKNDVKNDVKNGVKNDAKNNNVDSTGYGKELKMDKDRLDEIRIL INDENELHTLPSGAVGRRAPLNPFSSPILGKYRRKNVNAKKKVKDPRLNNNPLVGRLVVC ISTTAILFWVFFSEMIFNYNTFNGRCISKVLYPIYTEHLESDREPFFVFLGYGACEYNLE ESALDRHFIGTQTSDDGWPKNKVEDNPDGRGYATWDSINNRVYNQLGGLNTNYIRNYGEI YRLFWSMYLHGGLMHIIFNVICQIQILWMIEPDWGFLRTLFLFFISGITGNLLSAVCDPC GVTIGSSGSLYGLIGALFAYYVEYWKTIPRPCCVIIFMILVVIFGIFIGMFGYTDNYAHI GGCLGGILYGFATITTVSSADKCTLGERMLTSPPFSWFLSNATKQLIEEKAREKKIKGEN YRKKQIANKVHKTDALHNIMSIMKNRINDEGRPACKMKPREWIVRITSASILIILWIILF IYLLDESAYRSYTPMGQIKFSGVHSCFCCDIVKKIPLIDNGKLYWCFSNQDAFDYYCKE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1107600.fa Sequence name : PY17X_1107600 Sequence length : 659 VALUES OF COMPUTED PARAMETERS Coef20 : 3.555 CoefTot : -0.835 ChDiff : 25 ZoneTo : 16 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.953 3.429 0.812 1.102 MesoH : 1.188 1.422 0.209 0.592 MuHd_075 : 13.741 12.189 4.280 2.549 MuHd_095 : 10.584 10.276 4.826 3.127 MuHd_100 : 12.048 8.640 5.286 2.798 MuHd_105 : 16.734 7.102 6.253 2.694 Hmax_075 : -9.217 2.333 -4.997 -0.047 Hmax_095 : -13.912 -1.900 -5.786 -0.595 Hmax_100 : -9.300 -1.500 -3.967 0.130 Hmax_105 : -5.900 -3.000 -3.513 0.090 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9957 0.0043 DFMC : 0.9960 0.0040
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 659 PY17X_1107600 METNKSKKAIVNSKKNEALHELVDDTAKKGVKSPPWINKGNQVKKANIPGDPKNSNALKKEAPGNPNLVEKGIVGVPKKP 80 PTNTGKTSAKSDPKSGPKKDTKNDVKNDPKSVPKSDPKSVPKNDPKNDVKNDVKNGVKNDVKNDVKNGVKNDAKNNNVDS 160 TGYGKELKMDKDRLDEIRILINDENELHTLPSGAVGRRAPLNPFSSPILGKYRRKNVNAKKKVKDPRLNNNPLVGRLVVC 240 ISTTAILFWVFFSEMIFNYNTFNGRCISKVLYPIYTEHLESDREPFFVFLGYGACEYNLEESALDRHFIGTQTSDDGWPK 320 NKVEDNPDGRGYATWDSINNRVYNQLGGLNTNYIRNYGEIYRLFWSMYLHGGLMHIIFNVICQIQILWMIEPDWGFLRTL 400 FLFFISGITGNLLSAVCDPCGVTIGSSGSLYGLIGALFAYYVEYWKTIPRPCCVIIFMILVVIFGIFIGMFGYTDNYAHI 480 GGCLGGILYGFATITTVSSADKCTLGERMLTSPPFSWFLSNATKQLIEEKAREKKIKGENYRKKQIANKVHKTDALHNIM 560 SIMKNRINDEGRPACKMKPREWIVRITSASILIILWIILFIYLLDESAYRSYTPMGQIKFSGVHSCFCCDIVKKIPLIDN 640 GKLYWCFSNQDAFDYYCKE 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1107600 5 --METNK|SK 0.084 . PY17X_1107600 7 METNKSK|KA 0.064 . PY17X_1107600 8 ETNKSKK|AI 0.130 . PY17X_1107600 14 KAIVNSK|KN 0.068 . PY17X_1107600 15 AIVNSKK|NE 0.082 . PY17X_1107600 28 LVDDTAK|KG 0.060 . PY17X_1107600 29 VDDTAKK|GV 0.107 . PY17X_1107600 32 TAKKGVK|SP 0.076 . PY17X_1107600 39 SPPWINK|GN 0.072 . PY17X_1107600 44 NKGNQVK|KA 0.071 . PY17X_1107600 45 KGNQVKK|AN 0.145 . PY17X_1107600 53 NIPGDPK|NS 0.055 . PY17X_1107600 59 KNSNALK|KE 0.074 . PY17X_1107600 60 NSNALKK|EA 0.151 . PY17X_1107600 71 NPNLVEK|GI 0.085 . PY17X_1107600 78 GIVGVPK|KP 0.065 . PY17X_1107600 79 IVGVPKK|PP 0.100 . PY17X_1107600 86 PPTNTGK|TS 0.066 . PY17X_1107600 90 TGKTSAK|SD 0.103 . PY17X_1107600 94 SAKSDPK|SG 0.071 . PY17X_1107600 98 DPKSGPK|KD 0.059 . PY17X_1107600 99 PKSGPKK|DT 0.150 . PY17X_1107600 102 GPKKDTK|ND 0.063 . PY17X_1107600 106 DTKNDVK|ND 0.059 . PY17X_1107600 110 DVKNDPK|SV 0.093 . PY17X_1107600 114 DPKSVPK|SD 0.087 . PY17X_1107600 118 VPKSDPK|SV 0.102 . PY17X_1107600 122 DPKSVPK|ND 0.062 . PY17X_1107600 126 VPKNDPK|ND 0.059 . PY17X_1107600 130 DPKNDVK|ND 0.058 . PY17X_1107600 134 DVKNDVK|NG 0.052 . PY17X_1107600 138 DVKNGVK|ND 0.051 . PY17X_1107600 142 GVKNDVK|ND 0.055 . PY17X_1107600 146 DVKNDVK|NG 0.051 . PY17X_1107600 150 DVKNGVK|ND 0.054 . PY17X_1107600 154 GVKNDAK|NN 0.061 . PY17X_1107600 165 DSTGYGK|EL 0.056 . PY17X_1107600 168 GYGKELK|MD 0.064 . PY17X_1107600 171 KELKMDK|DR 0.065 . PY17X_1107600 173 LKMDKDR|LD 0.090 . PY17X_1107600 178 DRLDEIR|IL 0.096 . PY17X_1107600 197 PSGAVGR|RA 0.094 . PY17X_1107600 198 SGAVGRR|AP 0.115 . PY17X_1107600 211 SSPILGK|YR 0.072 . PY17X_1107600 213 PILGKYR|RK 0.070 . PY17X_1107600 214 ILGKYRR|KN 0.117 . PY17X_1107600 215 LGKYRRK|NV 0.114 . PY17X_1107600 220 RKNVNAK|KK 0.069 . PY17X_1107600 221 KNVNAKK|KV 0.125 . PY17X_1107600 222 NVNAKKK|VK 0.128 . PY17X_1107600 224 NAKKKVK|DP 0.068 . PY17X_1107600 227 KKVKDPR|LN 0.098 . PY17X_1107600 236 NNPLVGR|LV 0.092 . PY17X_1107600 265 YNTFNGR|CI 0.110 . PY17X_1107600 269 NGRCISK|VL 0.067 . PY17X_1107600 283 EHLESDR|EP 0.071 . PY17X_1107600 306 EESALDR|HF 0.104 . PY17X_1107600 320 SDDGWPK|NK 0.059 . PY17X_1107600 322 DGWPKNK|VE 0.056 . PY17X_1107600 330 EDNPDGR|GY 0.087 . PY17X_1107600 341 WDSINNR|VY 0.102 . PY17X_1107600 355 LNTNYIR|NY 0.094 . PY17X_1107600 362 NYGEIYR|LF 0.072 . PY17X_1107600 398 PDWGFLR|TL 0.078 . PY17X_1107600 446 YYVEYWK|TI 0.054 . PY17X_1107600 450 YWKTIPR|PC 0.099 . PY17X_1107600 502 TVSSADK|CT 0.073 . PY17X_1107600 508 KCTLGER|ML 0.070 . PY17X_1107600 524 FLSNATK|QL 0.074 . PY17X_1107600 530 KQLIEEK|AR 0.069 . PY17X_1107600 532 LIEEKAR|EK 0.096 . PY17X_1107600 534 EEKAREK|KI 0.059 . PY17X_1107600 535 EKAREKK|IK 0.411 . PY17X_1107600 537 AREKKIK|GE 0.090 . PY17X_1107600 542 IKGENYR|KK 0.095 . PY17X_1107600 543 KGENYRK|KQ 0.071 . PY17X_1107600 544 GENYRKK|QI 0.172 . PY17X_1107600 549 KKQIANK|VH 0.058 . PY17X_1107600 552 IANKVHK|TD 0.066 . PY17X_1107600 564 NIMSIMK|NR 0.057 . PY17X_1107600 566 MSIMKNR|IN 0.162 . PY17X_1107600 572 RINDEGR|PA 0.134 . PY17X_1107600 576 EGRPACK|MK 0.059 . PY17X_1107600 578 RPACKMK|PR 0.099 . PY17X_1107600 580 ACKMKPR|EW 0.116 . PY17X_1107600 585 PREWIVR|IT 0.126 . PY17X_1107600 610 LDESAYR|SY 0.118 . PY17X_1107600 619 TPMGQIK|FS 0.084 . PY17X_1107600 633 FCCDIVK|KI 0.058 . PY17X_1107600 634 CCDIVKK|IP 0.070 . PY17X_1107600 642 PLIDNGK|LY 0.055 . PY17X_1107600 658 AFDYYCK|E- 0.059 . ____________________________^_________________

  • Fasta :-

    >PY17X_1107600 ATGGAAACAAATAAATCGAAAAAGGCTATAGTTAATAGTAAAAAGAATGAAGCTTTACAT GAGTTAGTAGATGATACAGCCAAAAAGGGTGTCAAATCACCTCCATGGATAAACAAAGGA AACCAAGTAAAAAAAGCTAATATACCTGGAGATCCTAAAAATAGTAATGCTTTGAAAAAG GAAGCTCCAGGAAATCCAAATCTTGTTGAAAAAGGAATTGTAGGCGTTCCAAAAAAACCG CCCACTAACACGGGTAAAACTAGTGCGAAAAGTGACCCAAAAAGTGGCCCAAAAAAGGAC ACGAAAAATGATGTAAAAAATGACCCAAAAAGTGTCCCAAAAAGTGACCCAAAAAGTGTC CCAAAAAATGACCCAAAAAATGATGTAAAAAATGATGTAAAAAATGGTGTAAAAAATGAT GTAAAAAATGATGTAAAAAATGGTGTAAAAAATGATGCAAAAAATAATAATGTTGATAGT ACTGGATATGGAAAAGAATTAAAAATGGACAAAGATCGATTAGATGAAATAAGAATATTA ATTAATGACGAAAATGAATTGCATACATTGCCATCTGGAGCTGTTGGAAGGAGAGCCCCT TTGAACCCGTTTTCTTCACCTATACTTGGGAAATATAGAAGGAAAAATGTAAATGCAAAA AAAAAAGTAAAAGATCCGAGATTAAATAATAATCCATTAGTTGGAAGATTAGTAGTATGT ATATCAACTACAGCAATTTTATTTTGGGTATTTTTTTCTGAAATGATATTTAATTATAAT ACATTTAATGGTAGATGTATATCTAAAGTTTTATACCCAATATATACAGAGCATTTAGAA TCAGATAGAGAGCCGTTTTTTGTATTTTTAGGATATGGTGCATGTGAATATAATTTAGAA GAATCAGCTTTAGATAGACATTTTATAGGAACACAAACATCTGATGATGGATGGCCAAAA AATAAAGTAGAAGATAATCCAGATGGTAGAGGATATGCTACATGGGATTCAATAAATAAT CGTGTATATAATCAATTAGGAGGGTTAAATACAAATTATATTAGAAATTATGGAGAAATA TATCGTTTATTTTGGTCTATGTATTTACATGGTGGTTTAATGCATATAATATTTAATGTT ATATGTCAAATTCAAATATTATGGATGATTGAACCAGATTGGGGGTTTCTAAGAACATTA TTTTTATTTTTTATTTCTGGAATAACAGGAAATTTATTATCGGCTGTGTGTGACCCATGC GGAGTTACAATTGGATCATCAGGTTCATTATATGGATTAATAGGAGCATTATTTGCTTAT TATGTAGAATATTGGAAAACTATACCTAGGCCATGTTGTGTTATTATATTTATGATATTA GTCGTTATATTTGGTATTTTTATTGGTATGTTTGGGTATACAGATAATTATGCACATATT GGTGGATGTTTAGGAGGAATACTTTATGGATTTGCTACAATCACAACAGTATCATCAGCT GATAAATGTACATTAGGAGAAAGAATGTTAACATCTCCACCTTTTTCATGGTTTTTATCG AATGCAACGAAACAACTAATTGAAGAAAAAGCTAGAGAAAAAAAAATAAAAGGAGAAAAT TATCGAAAAAAACAAATAGCTAATAAAGTACATAAAACAGATGCATTACATAATATTATG TCTATTATGAAGAACAGAATAAATGATGAAGGAAGACCAGCATGTAAAATGAAACCAAGA GAGTGGATTGTACGTATCACATCTGCATCTATTTTAATTATATTATGGATCATTTTATTT ATCTATTTATTAGATGAAAGTGCTTATCGATCTTATACACCAATGGGCCAAATTAAATTT AGTGGGGTACATTCTTGTTTTTGTTGTGATATTGTTAAAAAAATTCCTTTAATAGATAAC GGAAAATTATATTGGTGTTTTAGCAATCAAGATGCTTTTGATTACTATTGTAAAGAATGA
  • Download Fasta

  • Fasta :-

    METNKSKKAIVNSKKNEALHELVDDTAKKGVKSPPWINKGNQVKKANIPGDPKNSNALKK EAPGNPNLVEKGIVGVPKKPPTNTGKTSAKSDPKSGPKKDTKNDVKNDPKSVPKSDPKSV PKNDPKNDVKNDVKNGVKNDVKNDVKNGVKNDAKNNNVDSTGYGKELKMDKDRLDEIRIL INDENELHTLPSGAVGRRAPLNPFSSPILGKYRRKNVNAKKKVKDPRLNNNPLVGRLVVC ISTTAILFWVFFSEMIFNYNTFNGRCISKVLYPIYTEHLESDREPFFVFLGYGACEYNLE ESALDRHFIGTQTSDDGWPKNKVEDNPDGRGYATWDSINNRVYNQLGGLNTNYIRNYGEI YRLFWSMYLHGGLMHIIFNVICQIQILWMIEPDWGFLRTLFLFFISGITGNLLSAVCDPC GVTIGSSGSLYGLIGALFAYYVEYWKTIPRPCCVIIFMILVVIFGIFIGMFGYTDNYAHI GGCLGGILYGFATITTVSSADKCTLGERMLTSPPFSWFLSNATKQLIEEKAREKKIKGEN YRKKQIANKVHKTDALHNIMSIMKNRINDEGRPACKMKPREWIVRITSASILIILWIILF IYLLDESAYRSYTPMGQIKFSGVHSCFCCDIVKKIPLIDNGKLYWCFSNQDAFDYYCKE

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1107600119 SSDPKSVPKN0.99unspPY17X_1107600119 SSDPKSVPKN0.99unspPY17X_1107600119 SSDPKSVPKN0.99unspPY17X_1107600281 SEHLESDREP0.997unspPY17X_11076006 SETNKSKKAI0.991unspPY17X_1107600111 SNDPKSVPKS0.993unsp
PY17X_1107600


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India