_IDPredictionOTHERSPmTPCS_Position
PY17X_1108200SP0.0064740.9931280.000398CS pos: 20-21. ISA-HN. Pr: 0.7217
No Results
  • Fasta :-

    >PY17X_1108200 MRRFFIYGCVVSLALCTISAHNDLMNKEKDVQKIIEDLRFLEKVDAILENSNMTIDDVEP DGDAYNPDEDAPKEELNKIEMEKKKAEEEEKHSKKKILEKDLLNEKKNKSLRLIVSENHA TTPSFFEESIIQEDFMSFIQSKGEIVNLKNIKSMIIELNSDMTDKELETYITLLKKKGAH VESDELVGADSIYVDIIKDAVKRGDTSINFKKIQSNMLEVENNTYEKINNKLEKSKNSDK KSYFNDEYRNLQWGLDLARLDDAQEMITTNSVETTKVCVIDSGIDYNHPDLKGNIYVNLK ELNGKPGVDDDNNGIIDDIYGANYVNNTGDPWDDHNHGTHVAGIISAIGNNSIGVVGVNT NSKLVICKALDDKKLGRLGNIFKCIDYCINNKANIINGSFSFDEYSTVFSSTIEYLGRLG ILFVVSSSNCSHPTSSIPDITRCDLSVNSKYPSVLSTQYDNVVVVANLKKKKNGEYDVSI NSFYSDIYCQVSAPGANIYSTATRGSYLELSGTSMAAPHVAGIASIILSINPELTYKQVV SILKNSVVKLSSHKNKIAWGGYIDILKAVKNAISSKNSYIRFQGISIWKNKKRN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1108200.fa Sequence name : PY17X_1108200 Sequence length : 594 VALUES OF COMPUTED PARAMETERS Coef20 : 5.052 CoefTot : 0.240 ChDiff : -11 ZoneTo : 22 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.018 2.071 0.534 0.691 MesoH : 0.002 0.422 -0.209 0.262 MuHd_075 : 29.108 21.761 6.918 7.440 MuHd_095 : 19.150 6.472 4.898 2.102 MuHd_100 : 20.051 8.099 5.617 4.581 MuHd_105 : 20.818 7.869 5.420 5.613 Hmax_075 : 21.233 24.967 5.389 7.630 Hmax_095 : 17.200 20.600 5.817 4.730 Hmax_100 : 17.800 18.600 6.111 6.180 Hmax_105 : 15.313 15.500 7.226 5.950 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7365 0.2635 DFMC : 0.7840 0.2160
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 594 PY17X_1108200 MRRFFIYGCVVSLALCTISAHNDLMNKEKDVQKIIEDLRFLEKVDAILENSNMTIDDVEPDGDAYNPDEDAPKEELNKIE 80 MEKKKAEEEEKHSKKKILEKDLLNEKKNKSLRLIVSENHATTPSFFEESIIQEDFMSFIQSKGEIVNLKNIKSMIIELNS 160 DMTDKELETYITLLKKKGAHVESDELVGADSIYVDIIKDAVKRGDTSINFKKIQSNMLEVENNTYEKINNKLEKSKNSDK 240 KSYFNDEYRNLQWGLDLARLDDAQEMITTNSVETTKVCVIDSGIDYNHPDLKGNIYVNLKELNGKPGVDDDNNGIIDDIY 320 GANYVNNTGDPWDDHNHGTHVAGIISAIGNNSIGVVGVNTNSKLVICKALDDKKLGRLGNIFKCIDYCINNKANIINGSF 400 SFDEYSTVFSSTIEYLGRLGILFVVSSSNCSHPTSSIPDITRCDLSVNSKYPSVLSTQYDNVVVVANLKKKKNGEYDVSI 480 NSFYSDIYCQVSAPGANIYSTATRGSYLELSGTSMAAPHVAGIASIILSINPELTYKQVVSILKNSVVKLSSHKNKIAWG 560 GYIDILKAVKNAISSKNSYIRFQGISIWKNKKRN 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1108200 2 -----MR|RF 0.091 . PY17X_1108200 3 ----MRR|FF 0.172 . PY17X_1108200 27 HNDLMNK|EK 0.059 . PY17X_1108200 29 DLMNKEK|DV 0.136 . PY17X_1108200 33 KEKDVQK|II 0.077 . PY17X_1108200 39 KIIEDLR|FL 0.105 . PY17X_1108200 43 DLRFLEK|VD 0.059 . PY17X_1108200 73 PDEDAPK|EE 0.062 . PY17X_1108200 78 PKEELNK|IE 0.059 . PY17X_1108200 83 NKIEMEK|KK 0.064 . PY17X_1108200 84 KIEMEKK|KA 0.156 . PY17X_1108200 85 IEMEKKK|AE 0.152 . PY17X_1108200 91 KAEEEEK|HS 0.064 . PY17X_1108200 94 EEEKHSK|KK 0.060 . PY17X_1108200 95 EEKHSKK|KI 0.097 . PY17X_1108200 96 EKHSKKK|IL 0.173 . PY17X_1108200 100 KKKILEK|DL 0.072 . PY17X_1108200 106 KDLLNEK|KN 0.051 . PY17X_1108200 107 DLLNEKK|NK 0.090 . PY17X_1108200 109 LNEKKNK|SL 0.092 . PY17X_1108200 112 KKNKSLR|LI 0.109 . PY17X_1108200 142 MSFIQSK|GE 0.072 . PY17X_1108200 149 GEIVNLK|NI 0.064 . PY17X_1108200 152 VNLKNIK|SM 0.082 . PY17X_1108200 165 NSDMTDK|EL 0.071 . PY17X_1108200 175 TYITLLK|KK 0.063 . PY17X_1108200 176 YITLLKK|KG 0.087 . PY17X_1108200 177 ITLLKKK|GA 0.127 . PY17X_1108200 198 IYVDIIK|DA 0.074 . PY17X_1108200 202 IIKDAVK|RG 0.061 . PY17X_1108200 203 IKDAVKR|GD 0.170 . PY17X_1108200 211 DTSINFK|KI 0.069 . PY17X_1108200 212 TSINFKK|IQ 0.141 . PY17X_1108200 227 ENNTYEK|IN 0.071 . PY17X_1108200 231 YEKINNK|LE 0.054 . PY17X_1108200 234 INNKLEK|SK 0.098 . PY17X_1108200 236 NKLEKSK|NS 0.065 . PY17X_1108200 240 KSKNSDK|KS 0.060 . PY17X_1108200 241 SKNSDKK|SY 0.213 . PY17X_1108200 249 YFNDEYR|NL 0.105 . PY17X_1108200 259 WGLDLAR|LD 0.091 . PY17X_1108200 276 NSVETTK|VC 0.054 . PY17X_1108200 292 YNHPDLK|GN 0.067 . PY17X_1108200 300 NIYVNLK|EL 0.059 . PY17X_1108200 305 LKELNGK|PG 0.061 . PY17X_1108200 363 GVNTNSK|LV 0.067 . PY17X_1108200 368 SKLVICK|AL 0.074 . PY17X_1108200 373 CKALDDK|KL 0.070 . PY17X_1108200 374 KALDDKK|LG 0.069 . PY17X_1108200 377 DDKKLGR|LG 0.072 . PY17X_1108200 383 RLGNIFK|CI 0.074 . PY17X_1108200 392 DYCINNK|AN 0.060 . PY17X_1108200 418 TIEYLGR|LG 0.075 . PY17X_1108200 442 SIPDITR|CD 0.070 . PY17X_1108200 450 DLSVNSK|YP 0.070 . PY17X_1108200 469 VVVANLK|KK 0.057 . PY17X_1108200 470 VVANLKK|KK 0.087 . PY17X_1108200 471 VANLKKK|KN 0.136 . PY17X_1108200 472 ANLKKKK|NG 0.092 . PY17X_1108200 504 IYSTATR|GS 0.114 . PY17X_1108200 537 NPELTYK|QV 0.077 . PY17X_1108200 544 QVVSILK|NS 0.057 . PY17X_1108200 549 LKNSVVK|LS 0.076 . PY17X_1108200 554 VKLSSHK|NK 0.061 . PY17X_1108200 556 LSSHKNK|IA 0.139 . PY17X_1108200 567 GYIDILK|AV 0.073 . PY17X_1108200 570 DILKAVK|NA 0.060 . PY17X_1108200 576 KNAISSK|NS 0.070 . PY17X_1108200 581 SKNSYIR|FQ 0.141 . PY17X_1108200 589 QGISIWK|NK 0.057 . PY17X_1108200 591 ISIWKNK|KR 0.067 . PY17X_1108200 592 SIWKNKK|RN 0.090 . PY17X_1108200 593 IWKNKKR|N- 0.250 . ____________________________^_________________
  • Fasta :-

    >PY17X_1108200 ATGCGAAGATTTTTTATCTATGGTTGTGTCGTAAGCTTGGCTTTGTGCACAATATCGGCA CATAATGATTTAATGAATAAAGAAAAAGATGTACAGAAAATAATAGAAGATTTGCGTTTT TTAGAAAAAGTTGATGCAATTTTAGAAAATAGTAACATGACAATTGATGATGTTGAACCA GATGGAGATGCATATAATCCAGATGAGGATGCACCAAAAGAAGAATTAAACAAAATAGAA ATGGAAAAGAAAAAAGCTGAAGAAGAAGAAAAACATTCTAAAAAAAAAATATTAGAAAAA GATTTATTAAATGAAAAAAAAAATAAATCTTTAAGATTAATTGTTAGTGAAAATCATGCA ACTACTCCATCATTTTTTGAGGAATCAATTATTCAAGAAGATTTTATGTCATTTATTCAA AGTAAAGGAGAAATTGTAAATTTAAAAAATATAAAATCCATGATAATAGAATTAAATTCA GATATGACAGATAAAGAATTAGAAACCTATATAACATTATTAAAAAAAAAAGGAGCTCAT GTAGAATCTGATGAATTAGTAGGAGCTGATTCTATATATGTAGACATAATAAAAGATGCA GTAAAAAGAGGAGATACATCTATAAATTTTAAAAAGATACAATCAAATATGTTAGAAGTA GAAAATAACACATATGAAAAAATAAATAATAAATTAGAAAAATCTAAAAATTCAGATAAA AAATCATATTTTAACGATGAATATAGAAATTTGCAATGGGGTTTAGATCTAGCCCGTTTA GATGATGCTCAAGAAATGATAACAACTAATTCAGTCGAAACAACAAAAGTATGTGTAATA GATAGTGGTATAGATTATAATCATCCAGATTTAAAAGGCAATATATATGTAAATTTAAAA GAGTTAAATGGAAAACCAGGTGTAGATGATGATAATAATGGAATCATTGATGATATATAT GGTGCGAATTATGTAAACAATACTGGAGATCCATGGGATGATCATAATCATGGAACTCAT GTTGCAGGAATAATTTCAGCAATTGGAAATAATTCTATTGGTGTTGTTGGAGTAAATACT AATTCTAAGCTAGTTATTTGTAAAGCTTTAGATGATAAAAAATTAGGTAGATTAGGTAAT ATATTTAAATGTATTGATTATTGTATTAATAATAAGGCTAATATTATTAATGGAAGTTTT TCTTTTGATGAATATAGTACTGTATTTAGTTCAACTATAGAATATTTAGGAAGATTAGGA ATTTTATTTGTTGTTTCGTCAAGTAACTGTTCACATCCTACATCTTCTATTCCAGATATA ACTAGATGTGATTTATCTGTTAATTCTAAATACCCATCAGTACTTTCAACACAATATGAC AATGTGGTTGTTGTTGCAAACTTAAAAAAGAAAAAAAATGGCGAGTATGATGTTTCAATA AACTCTTTTTATAGTGATATTTATTGTCAAGTTTCAGCACCAGGTGCAAATATTTATTCT ACTGCTACTCGGGGTTCATATCTTGAATTAAGTGGAACATCTATGGCTGCTCCTCATGTT GCTGGAATTGCTTCGATTATTTTATCAATAAATCCAGAGTTAACATATAAACAAGTTGTA AGTATTTTAAAAAATTCAGTTGTAAAATTATCTTCCCATAAAAATAAAATTGCATGGGGT GGTTATATAGATATATTGAAGGCCGTAAAAAATGCCATATCTTCAAAGAACTCGTACATA AGATTTCAAGGTATTAGCATATGGAAAAACAAAAAAAGGAACTAG
  • Download Fasta
  • Fasta :-

    MRRFFIYGCVVSLALCTISAHNDLMNKEKDVQKIIEDLRFLEKVDAILENSNMTIDDVEP DGDAYNPDEDAPKEELNKIEMEKKKAEEEEKHSKKKILEKDLLNEKKNKSLRLIVSENHA TTPSFFEESIIQEDFMSFIQSKGEIVNLKNIKSMIIELNSDMTDKELETYITLLKKKGAH VESDELVGADSIYVDIIKDAVKRGDTSINFKKIQSNMLEVENNTYEKINNKLEKSKNSDK KSYFNDEYRNLQWGLDLARLDDAQEMITTNSVETTKVCVIDSGIDYNHPDLKGNIYVNLK ELNGKPGVDDDNNGIIDDIYGANYVNNTGDPWDDHNHGTHVAGIISAIGNNSIGVVGVNT NSKLVICKALDDKKLGRLGNIFKCIDYCINNKANIINGSFSFDEYSTVFSSTIEYLGRLG ILFVVSSSNCSHPTSSIPDITRCDLSVNSKYPSVLSTQYDNVVVVANLKKKKNGEYDVSI NSFYSDIYCQVSAPGANIYSTATRGSYLELSGTSMAAPHVAGIASIILSINPELTYKQVV SILKNSVVKLSSHKNKIAWGGYIDILKAVKNAISSKNSYIRFQGISIWKNKKRN

  • title: active site
  • coordinates: H337,F400,S514
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1108200506 SATRGSYLEL0.993unspPY17X_1108200506 SATRGSYLEL0.993unspPY17X_1108200506 SATRGSYLEL0.993unspPY17X_110820093 SEEKHSKKKI0.994unspPY17X_1108200238 SKSKNSDKKS0.995unsp
PY17X_1108200


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India