PY17X_1127500 | E3 ubiquitin-protein ligase RNF5, putative

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_IDPredictionOTHERSPmTPCS_Position
PY17X_1127500OTHER0.9999930.0000050.000002
No Results

  • Fasta :-

    >PY17X_1127500 MNETSKEYDSLYDGIYDYDVNDELINTVNNDNLVNLNPQNKSAYPSSNQNKDPNDDQTKI FPKNEKQDEPNLFTDGLSSPNLNDIDIYKNNKTVENIQKEELDIICKDEAPTDKGSLLIS KDSINCNPCNSDNNKNSDNNNNNSDNNNNNSDNNDNEKKLTNNSGHTNDDLNIIKNNHDK IEDIYEKEINNDTKNIEETQDDKLNDLYQSSKELGSSPHELGFIIVEDKCEQIKKNERLL SKESKSGCDTEKKNKNAYEQEQIDKNNINSNKQNECNTNDNKNSSCQNDEKKETTNNNAP QENDCNRSTFECNICFDDVRDPVVTRCGHLFCWFCLSAWIKKNIDCPVCKAEVTKENVIP LYGRGKNSSDHKYSNNEEPRPTPKRKENVRRNNNYSNNLGLRASFGVWANPFSFGMSYTN MSDQSHFYDNRNDNRRPQMDAFHVEAASSCFFFLGFFLSLYILFYSS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1127500.fa Sequence name : PY17X_1127500 Sequence length : 467 VALUES OF COMPUTED PARAMETERS Coef20 : 2.684 CoefTot : -0.134 ChDiff : -25 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.388 2.053 0.426 0.819 MesoH : -0.674 -0.132 -0.485 0.118 MuHd_075 : 34.114 18.888 8.835 3.590 MuHd_095 : 34.637 18.835 9.648 6.386 MuHd_100 : 44.320 22.550 11.634 7.658 MuHd_105 : 43.778 21.432 11.087 7.409 Hmax_075 : 1.983 5.483 -1.486 1.493 Hmax_095 : 8.400 5.600 0.489 3.870 Hmax_100 : 9.700 6.100 0.756 3.870 Hmax_105 : 1.663 2.625 -1.231 2.931 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9737 0.0263 DFMC : 0.9475 0.0525
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 467 PY17X_1127500 MNETSKEYDSLYDGIYDYDVNDELINTVNNDNLVNLNPQNKSAYPSSNQNKDPNDDQTKIFPKNEKQDEPNLFTDGLSSP 80 NLNDIDIYKNNKTVENIQKEELDIICKDEAPTDKGSLLISKDSINCNPCNSDNNKNSDNNNNNSDNNNNNSDNNDNEKKL 160 TNNSGHTNDDLNIIKNNHDKIEDIYEKEINNDTKNIEETQDDKLNDLYQSSKELGSSPHELGFIIVEDKCEQIKKNERLL 240 SKESKSGCDTEKKNKNAYEQEQIDKNNINSNKQNECNTNDNKNSSCQNDEKKETTNNNAPQENDCNRSTFECNICFDDVR 320 DPVVTRCGHLFCWFCLSAWIKKNIDCPVCKAEVTKENVIPLYGRGKNSSDHKYSNNEEPRPTPKRKENVRRNNNYSNNLG 400 LRASFGVWANPFSFGMSYTNMSDQSHFYDNRNDNRRPQMDAFHVEAASSCFFFLGFFLSLYILFYSS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1127500 6 -MNETSK|EY 0.067 . PY17X_1127500 41 NLNPQNK|SA 0.109 . PY17X_1127500 51 PSSNQNK|DP 0.094 . PY17X_1127500 59 PNDDQTK|IF 0.067 . PY17X_1127500 63 QTKIFPK|NE 0.067 . PY17X_1127500 66 IFPKNEK|QD 0.070 . PY17X_1127500 89 NDIDIYK|NN 0.068 . PY17X_1127500 92 DIYKNNK|TV 0.079 . PY17X_1127500 99 TVENIQK|EE 0.062 . PY17X_1127500 107 ELDIICK|DE 0.061 . PY17X_1127500 114 DEAPTDK|GS 0.059 . PY17X_1127500 121 GSLLISK|DS 0.065 . PY17X_1127500 135 CNSDNNK|NS 0.073 . PY17X_1127500 158 DNNDNEK|KL 0.065 . PY17X_1127500 159 NNDNEKK|LT 0.121 . PY17X_1127500 175 DDLNIIK|NN 0.063 . PY17X_1127500 180 IKNNHDK|IE 0.086 . PY17X_1127500 187 IEDIYEK|EI 0.059 . PY17X_1127500 194 EINNDTK|NI 0.088 . PY17X_1127500 203 EETQDDK|LN 0.056 . PY17X_1127500 212 DLYQSSK|EL 0.072 . PY17X_1127500 229 FIIVEDK|CE 0.057 . PY17X_1127500 234 DKCEQIK|KN 0.066 . PY17X_1127500 235 KCEQIKK|NE 0.071 . PY17X_1127500 238 QIKKNER|LL 0.087 . PY17X_1127500 242 NERLLSK|ES 0.065 . PY17X_1127500 245 LLSKESK|SG 0.108 . PY17X_1127500 252 SGCDTEK|KN 0.067 . PY17X_1127500 253 GCDTEKK|NK 0.097 . PY17X_1127500 255 DTEKKNK|NA 0.075 . PY17X_1127500 265 EQEQIDK|NN 0.062 . PY17X_1127500 272 NNINSNK|QN 0.072 . PY17X_1127500 282 CNTNDNK|NS 0.060 . PY17X_1127500 291 SCQNDEK|KE 0.063 . PY17X_1127500 292 CQNDEKK|ET 0.103 . PY17X_1127500 307 QENDCNR|ST 0.160 . PY17X_1127500 320 ICFDDVR|DP 0.081 . PY17X_1127500 326 RDPVVTR|CG 0.073 . PY17X_1127500 341 CLSAWIK|KN 0.072 . PY17X_1127500 342 LSAWIKK|NI 0.103 . PY17X_1127500 350 IDCPVCK|AE 0.070 . PY17X_1127500 355 CKAEVTK|EN 0.067 . PY17X_1127500 364 VIPLYGR|GK 0.078 . PY17X_1127500 366 PLYGRGK|NS 0.067 . PY17X_1127500 372 KNSSDHK|YS 0.088 . PY17X_1127500 380 SNNEEPR|PT 0.103 . PY17X_1127500 384 EPRPTPK|RK 0.073 . PY17X_1127500 385 PRPTPKR|KE 0.139 . PY17X_1127500 386 RPTPKRK|EN 0.089 . PY17X_1127500 390 KRKENVR|RN 0.084 . PY17X_1127500 391 RKENVRR|NN 0.165 . PY17X_1127500 402 SNNLGLR|AS 0.103 . PY17X_1127500 431 SHFYDNR|ND 0.080 . PY17X_1127500 435 DNRNDNR|RP 0.074 . PY17X_1127500 436 NRNDNRR|PQ 0.226 . ____________________________^_________________

  • Fasta :-

    >PY17X_1127500 ATGAATGAAACTAGTAAAGAATATGATTCTCTCTATGATGGCATATATGATTATGATGTT AATGATGAATTAATAAATACTGTTAACAATGACAACTTAGTAAATTTGAATCCACAAAAT AAATCAGCATATCCAAGTTCAAATCAAAATAAAGACCCAAATGATGACCAAACAAAAATA TTCCCAAAAAATGAAAAACAAGACGAACCAAATTTATTTACAGATGGTTTATCATCGCCC AATTTAAACGACATTGATATATATAAAAATAATAAAACAGTTGAAAATATTCAAAAAGAA GAATTGGATATTATTTGCAAAGATGAAGCACCAACAGACAAAGGTTCTTTATTAATCTCA AAAGATAGCATAAATTGTAATCCTTGTAATAGTGATAATAATAAAAATAGTGATAATAAT AATAATAATAGTGATAATAATAATAATAATAGTGATAATAATGATAATGAAAAAAAATTA ACAAACAATTCTGGGCATACAAATGATGACTTAAATATTATAAAAAATAATCACGATAAA ATTGAGGATATATATGAAAAAGAAATTAATAATGATACAAAAAACATTGAAGAAACCCAA GATGATAAACTAAATGATTTATATCAAAGTTCAAAGGAACTTGGATCATCACCCCATGAG CTTGGTTTTATAATTGTAGAGGACAAATGTGAACAAATAAAAAAAAACGAAAGATTATTA AGTAAAGAATCTAAAAGTGGGTGCGATACAGAGAAAAAAAATAAAAATGCATATGAGCAA GAACAAATTGATAAAAACAACATAAATAGTAATAAACAAAATGAGTGTAATACAAACGAT AATAAAAATAGCTCATGTCAAAATGATGAGAAAAAAGAAACTACAAATAATAATGCCCCA CAAGAAAATGATTGCAATAGAAGTACATTTGAATGTAATATATGTTTTGATGATGTAAGA GATCCTGTTGTTACTAGATGTGGCCATTTATTTTGTTGGTTTTGTCTTTCTGCATGGATT AAAAAAAATATTGATTGCCCTGTATGTAAAGCAGAAGTAACCAAAGAAAATGTAATACCT TTGTATGGTAGAGGAAAAAATAGTAGTGATCATAAATATTCAAATAATGAAGAACCCCGG CCTACACCTAAAAGAAAAGAAAATGTTCGAAGAAATAACAACTATTCTAATAATTTAGGA TTAAGAGCTTCTTTTGGTGTATGGGCCAACCCGTTTTCTTTTGGCATGTCTTATACAAAC ATGTCTGACCAATCACATTTTTATGACAATAGAAATGATAATAGAAGGCCACAAATGGAT GCATTTCATGTTGAAGCTGCTTCATCGTGTTTCTTTTTCTTAGGATTTTTTTTGTCTTTG TACATTTTGTTTTATTCATCTTAG
  • Download Fasta

  • Fasta :-

    MNETSKEYDSLYDGIYDYDVNDELINTVNNDNLVNLNPQNKSAYPSSNQNKDPNDDQTKI FPKNEKQDEPNLFTDGLSSPNLNDIDIYKNNKTVENIQKEELDIICKDEAPTDKGSLLIS KDSINCNPCNSDNNKNSDNNNNNSDNNNNNSDNNDNEKKLTNNSGHTNDDLNIIKNNHDK IEDIYEKEINNDTKNIEETQDDKLNDLYQSSKELGSSPHELGFIIVEDKCEQIKKNERLL SKESKSGCDTEKKNKNAYEQEQIDKNNINSNKQNECNTNDNKNSSCQNDEKKETTNNNAP QENDCNRSTFECNICFDDVRDPVVTRCGHLFCWFCLSAWIKKNIDCPVCKAEVTKENVIP LYGRGKNSSDHKYSNNEEPRPTPKRKENVRRNNNYSNNLGLRASFGVWANPFSFGMSYTN MSDQSHFYDNRNDNRRPQMDAFHVEAASSCFFFLGFFLSLYILFYSS

  • title: Zn binding site
  • coordinates: C312,C315,C327,H329,C332,C335,C346,C349
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1127500246 SKESKSGCDT0.998unspPY17X_1127500246 SKESKSGCDT0.998unspPY17X_1127500246 SKESKSGCDT0.998unspPY17X_1127500382 TEPRPTPKRK0.994unspPY17X_112750010 SKEYDSLYDG0.997unspPY17X_1127500217 SELGSSPHEL0.994unsp
PY17X_1127500


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India