PY17X_1127700 | protein DJ-1, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1127700OTHER0.9997250.0002340.000041
No Results

  • Fasta :-

    >PY17X_1127700 MSMKKKALVVVASGSEDVEYITTVDVLRRANIDVTTASIHETEKVQLQSKNTVFADTIID KVKNDIFDVIIIPGGMKGSNAISDCQVVIEMLRDQKKNNRLYAAICAAPALVLHRHSLID DVEAVAYPSFESDFKHIGKGRVCVSKNCVTSLGPGTAVEFALKIVELLLDRESALRLASG FLLHPSITF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1127700.fa Sequence name : PY17X_1127700 Sequence length : 189 VALUES OF COMPUTED PARAMETERS Coef20 : 3.777 CoefTot : 0.151 ChDiff : -1 ZoneTo : 15 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.788 1.341 0.110 0.515 MesoH : -0.703 0.488 -0.341 0.209 MuHd_075 : 10.473 7.129 3.486 2.425 MuHd_095 : 22.743 13.282 6.673 4.137 MuHd_100 : 19.395 13.628 5.545 4.113 MuHd_105 : 14.131 11.397 3.769 3.338 Hmax_075 : 4.200 9.200 -0.408 3.000 Hmax_095 : 14.400 15.100 2.607 4.860 Hmax_100 : 5.000 12.400 0.423 4.140 Hmax_105 : 5.200 11.600 -0.368 3.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9242 0.0758 DFMC : 0.9258 0.0742
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 189 PY17X_1127700 MSMKKKALVVVASGSEDVEYITTVDVLRRANIDVTTASIHETEKVQLQSKNTVFADTIIDKVKNDIFDVIIIPGGMKGSN 80 AISDCQVVIEMLRDQKKNNRLYAAICAAPALVLHRHSLIDDVEAVAYPSFESDFKHIGKGRVCVSKNCVTSLGPGTAVEF 160 ALKIVELLLDRESALRLASGFLLHPSITF 240 ................................................................................ 80 ................................................................................ 160 ............................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1127700 4 ---MSMK|KK 0.061 . PY17X_1127700 5 --MSMKK|KA 0.100 . PY17X_1127700 6 -MSMKKK|AL 0.154 . PY17X_1127700 28 TTVDVLR|RA 0.093 . PY17X_1127700 29 TVDVLRR|AN 0.171 . PY17X_1127700 44 SIHETEK|VQ 0.062 . PY17X_1127700 50 KVQLQSK|NT 0.060 . PY17X_1127700 61 ADTIIDK|VK 0.063 . PY17X_1127700 63 TIIDKVK|ND 0.063 . PY17X_1127700 77 IIPGGMK|GS 0.061 . PY17X_1127700 93 VVIEMLR|DQ 0.075 . PY17X_1127700 96 EMLRDQK|KN 0.082 . PY17X_1127700 97 MLRDQKK|NN 0.092 . PY17X_1127700 100 DQKKNNR|LY 0.081 . PY17X_1127700 115 PALVLHR|HS 0.070 . PY17X_1127700 135 SFESDFK|HI 0.085 . PY17X_1127700 139 DFKHIGK|GR 0.059 . PY17X_1127700 141 KHIGKGR|VC 0.081 . PY17X_1127700 146 GRVCVSK|NC 0.072 . PY17X_1127700 163 AVEFALK|IV 0.068 . PY17X_1127700 171 VELLLDR|ES 0.060 . PY17X_1127700 176 DRESALR|LA 0.097 . ____________________________^_________________

  • Fasta :-

    >PY17X_1127700 ATGAGTATGAAAAAAAAGGCATTAGTTGTAGTGGCATCCGGTTCTGAAGACGTTGAATAT ATAACAACAGTTGACGTATTAAGAAGAGCTAATATTGATGTAACAACCGCTTCAATACAC GAGACAGAAAAGGTTCAGCTTCAATCAAAAAATACCGTTTTTGCTGATACTATTATAGAT AAAGTAAAAAATGATATATTCGATGTAATAATAATACCAGGAGGAATGAAAGGATCTAAT GCTATATCAGATTGTCAAGTTGTTATTGAAATGCTAAGAGACCAAAAAAAAAATAATAGA CTTTATGCAGCTATATGTGCAGCACCTGCACTTGTTCTACATCGACATTCCTTGATTGAT GATGTTGAAGCAGTTGCATACCCCTCTTTTGAAAGTGATTTTAAACACATTGGTAAAGGA AGAGTTTGTGTTTCAAAAAATTGTGTAACATCTCTTGGACCAGGAACAGCTGTAGAATTC GCACTTAAAATTGTAGAATTATTGTTAGATAGAGAATCTGCTCTGAGACTTGCTAGTGGT TTTCTTTTACATCCATCTATTACTTTTTAA
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  • Fasta :-

    MSMKKKALVVVASGSEDVEYITTVDVLRRANIDVTTASIHETEKVQLQSKNTVFADTIID KVKNDIFDVIIIPGGMKGSNAISDCQVVIEMLRDQKKNNRLYAAICAAPALVLHRHSLID DVEAVAYPSFESDFKHIGKGRVCVSKNCVTSLGPGTAVEFALKIVELLLDRESALRLASG FLLHPSITF

  • title: conserved cys residue
  • coordinates: C106
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_112770038 SVTTASIHET0.99unspPY17X_1127700117 SLHRHSLIDD0.997unsp
PY17X_1127700


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India