PY17X_1131800 | proteasome subunit alpha type-4, putative

UniProt_ID:

Computed_GO_Component_IDs: GO:0005839 GO:0019773
Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0004298
Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PY17X_1131800	OTHER	0.999681	0.000104	0.000215

No Results

Fasta :-
>PY17X_1131800 MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGIITNDGVILGADKVFISKLINKAN NFEKIYKIDDHIFCGVAGLNADANILINQSRLYAQRYLYNYNDVEPVAQLVVQICDIKQS YTQYGGLRPYGVSFLIAGYDTKEGYQLYHTDPSGNYSGWFATAIGTNNLTASSILKQEWK KDMTLQEGLLLAIKTLAKSTDSEIPKCEKIELAYLSNKDGKVIQKYLTEKEIAELIKIYT QQNVKK
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1131800.fa Sequence name : PY17X_1131800 Sequence length : 246 VALUES OF COMPUTED PARAMETERS Coef20 : 4.248 CoefTot : 0.254 ChDiff : 1 ZoneTo : 5 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.082 1.394 0.155 0.584 MesoH : -0.553 0.404 -0.390 0.251 MuHd_075 : 23.056 5.387 3.615 6.134 MuHd_095 : 14.841 4.720 3.134 2.857 MuHd_100 : 18.488 8.050 3.829 4.676 MuHd_105 : 19.679 11.334 4.048 6.197 Hmax_075 : -3.850 -2.975 -3.651 0.210 Hmax_095 : -1.312 -1.050 -2.054 0.411 Hmax_100 : 10.800 3.300 0.402 2.970 Hmax_105 : -1.283 -0.933 -1.926 2.065 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6780 0.3220 DFMC : 0.6417 0.3583

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 246 PY17X_1131800 MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGIITNDGVILGADKVFISKLINKANNFEKIYKIDDHIFCGVAGLN 80 ADANILINQSRLYAQRYLYNYNDVEPVAQLVVQICDIKQSYTQYGGLRPYGVSFLIAGYDTKEGYQLYHTDPSGNYSGWF 160 ATAIGTNNLTASSILKQEWKKDMTLQEGLLLAIKTLAKSTDSEIPKCEKIELAYLSNKDGKVIQKYLTEKEIAELIKIYT 240 QQNVKK 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1131800 3 ----MAR|RY 0.096 . PY17X_1131800 4 ---MARR|YD 0.146 . PY17X_1131800 8 ARRYDSR|TT 0.106 . PY17X_1131800 17 TFSPEGR|LY 0.096 . PY17X_1131800 49 VILGADK|VF 0.054 . PY17X_1131800 54 DKVFISK|LI 0.064 . PY17X_1131800 58 ISKLINK|AN 0.060 . PY17X_1131800 64 KANNFEK|IY 0.072 . PY17X_1131800 67 NFEKIYK|ID 0.072 . PY17X_1131800 91 ILINQSR|LY 0.081 . PY17X_1131800 96 SRLYAQR|YL 0.107 . PY17X_1131800 118 VQICDIK|QS 0.063 . PY17X_1131800 128 TQYGGLR|PY 0.103 . PY17X_1131800 142 IAGYDTK|EG 0.064 . PY17X_1131800 176 TASSILK|QE 0.076 . PY17X_1131800 180 ILKQEWK|KD 0.065 . PY17X_1131800 181 LKQEWKK|DM 0.141 . PY17X_1131800 194 GLLLAIK|TL 0.060 . PY17X_1131800 198 AIKTLAK|ST 0.087 . PY17X_1131800 206 TDSEIPK|CE 0.074 . PY17X_1131800 209 EIPKCEK|IE 0.055 . PY17X_1131800 218 LAYLSNK|DG 0.071 . PY17X_1131800 221 LSNKDGK|VI 0.083 . PY17X_1131800 225 DGKVIQK|YL 0.077 . PY17X_1131800 230 QKYLTEK|EI 0.065 . PY17X_1131800 237 EIAELIK|IY 0.067 . PY17X_1131800 245 YTQQNVK|K- 0.057 . PY17X_1131800 246 TQQNVKK|-- 0.145 . ____________________________^_________________

Fasta :-
>PY17X_1131800 ATGGCTAGAAGATATGATAGTAGGACGACAACATTTTCCCCAGAAGGAAGATTATATCAA GTAGAATATGCTCTTGAAGCTATAAATAATGCAAGTATAACAATAGGAATAATAACTAAT GATGGAGTAATATTAGGTGCTGATAAAGTATTTATATCAAAGTTAATAAATAAAGCTAAT AATTTTGAAAAAATTTACAAAATCGATGATCATATATTTTGTGGAGTAGCAGGATTAAAT GCTGATGCAAACATATTAATAAATCAATCACGATTATATGCACAAAGATATTTATATAAT TACAATGATGTTGAACCAGTAGCACAATTAGTAGTTCAAATATGTGATATTAAACAAAGT TATACCCAATATGGTGGATTAAGACCATATGGAGTTAGCTTTTTAATTGCTGGCTATGAT ACAAAAGAAGGATATCAACTTTATCATACTGATCCTAGTGGAAATTATTCTGGATGGTTT GCTACAGCTATCGGTACAAATAATTTAACAGCTAGTTCCATTCTTAAGCAGGAATGGAAA AAAGATATGACCCTGCAAGAAGGTTTATTGCTAGCTATAAAAACGCTAGCTAAGAGCACA GATAGTGAAATCCCAAAATGTGAAAAAATTGAATTAGCATATTTGTCAAATAAAGACGGA AAAGTTATCCAAAAGTATTTAACAGAGAAAGAGATAGCAGAATTAATTAAAATATATACA CAACAAAATGTTAAAAAATAA
Download Fasta

Fasta :-

MARRYDSRTTTFSPEGRLYQVEYALEAINNASITIGIITNDGVILGADKVFISKLINKAN NFEKIYKIDDHIFCGVAGLNADANILINQSRLYAQRYLYNYNDVEPVAQLVVQICDIKQS YTQYGGLRPYGVSFLIAGYDTKEGYQLYHTDPSGNYSGWFATAIGTNNLTASSILKQEWK KDMTLQEGLLLAIKTLAKSTDSEIPKCEKIELAYLSNKDGKVIQKYLTEKEIAELIKIYT QQNVKK

Proteasome subunits

title: active site
coordinates: S32,D48,V50,K64,T166

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PY17X_1131800	216 S	LAYLSNKDG	0.996	unsp	PY17X_1131800	216 S	LAYLSNKDG	0.996	unsp	PY17X_1131800	216 S	LAYLSNKDG	0.996	unsp	PY17X_1131800	7 S	RRYDSRTTT	0.992	unsp	PY17X_1131800	13 S	TTTFSPEGR	0.99	unsp

PY17X_1131800

PY17X_1131800 | proteasome subunit alpha type-4, putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs: GO:0005839 GO:0019773

Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex

Computed_GO_Function_IDs: GO:0004175 GO:0004298

Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0051603 GO:0006511

Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Proteasome subunits

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India