PY17X_1229400 | methionine aminopeptidase 1c, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1229400SP0.0164900.9818240.001686CS pos: 17-18. FLC-KK. Pr: 0.7491
No Results

  • Fasta :-

    >PY17X_1229400 MNVHIFLLLLFCGTFLCKKNSNNSNFRIIHQNGTRGNTKRNVKCVRKKKQYNYIHPNEVS KNDIRYHHYNFFITTHTHKKKLAKKDKFKRRYNLNSSGEGFSNTIHNNVKKNTNNYSEEQ LPSYHKYIENFKTRKIIHPSIRITDHDKKFMKCKESYNKLYSHLTETELFENFSYVGRQR KGILSPKYYLPKYIDRPNYHKTGTPIYVNYENNLKSKEHISIRNDDNNNNETDEKYHKTY FTTNKYEYNNVKSDYDIEIISRNCKFARELMDDISYIICEGITTNDIDIYILNKCVNNGF YPSPLNYHLFPKSSCISINEILCHGIPDNNVLYENDIVKVDISVYKDGYHADMCESFIVQ KISKEEKKKRKKNYDYIYLNDKLRTKHTKYIIKYNFDLTTHKIVKKGKYPSVRKVRYNPP NSKEHENEYIEEYDDNTNSVFGENSYNNNYYTYNDDPNNVSENYEDELENFHRRYDEDFI FNPKKGELYNNLQQYIYQKGMEKDKKGKEMNRKFEFFDTNKQDITNMKKFMFEKNRDLIK TAYDCTMAAISICKPGVPFKNIAKVMDDYLKKKNNSYQYYSIVPNLCGHNIGKNFHEEPF IIHTLNNDDRKMCENLVFTIEPIITERSCDFITWPDNWTLSNSRYYYSAQFEHTILITKN GAKILTQKTETSPKYIWEND
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1229400.fa Sequence name : PY17X_1229400 Sequence length : 680 VALUES OF COMPUTED PARAMETERS Coef20 : 4.244 CoefTot : -3.101 ChDiff : 21 ZoneTo : 57 KR : 11 DE : 0 CleavSite : 37 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.918 2.071 0.337 0.710 MesoH : -0.866 0.181 -0.388 0.212 MuHd_075 : 34.044 20.328 10.109 7.537 MuHd_095 : 40.249 18.306 10.605 8.587 MuHd_100 : 35.295 13.549 8.332 6.544 MuHd_105 : 27.049 14.614 6.906 5.502 Hmax_075 : 14.233 13.300 3.100 4.993 Hmax_095 : -3.500 0.400 -2.540 2.020 Hmax_100 : -4.300 -3.200 -3.561 1.600 Hmax_105 : -13.300 -3.733 -4.914 -1.062 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1392 0.8608 DFMC : 0.1158 0.8842 This protein is probably imported in mitochondria. f(Ser) = 0.0351 f(Arg) = 0.0702 CMi = 0.20855 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 680 PY17X_1229400 MNVHIFLLLLFCGTFLCKKNSNNSNFRIIHQNGTRGNTKRNVKCVRKKKQYNYIHPNEVSKNDIRYHHYNFFITTHTHKK 80 KLAKKDKFKRRYNLNSSGEGFSNTIHNNVKKNTNNYSEEQLPSYHKYIENFKTRKIIHPSIRITDHDKKFMKCKESYNKL 160 YSHLTETELFENFSYVGRQRKGILSPKYYLPKYIDRPNYHKTGTPIYVNYENNLKSKEHISIRNDDNNNNETDEKYHKTY 240 FTTNKYEYNNVKSDYDIEIISRNCKFARELMDDISYIICEGITTNDIDIYILNKCVNNGFYPSPLNYHLFPKSSCISINE 320 ILCHGIPDNNVLYENDIVKVDISVYKDGYHADMCESFIVQKISKEEKKKRKKNYDYIYLNDKLRTKHTKYIIKYNFDLTT 400 HKIVKKGKYPSVRKVRYNPPNSKEHENEYIEEYDDNTNSVFGENSYNNNYYTYNDDPNNVSENYEDELENFHRRYDEDFI 480 FNPKKGELYNNLQQYIYQKGMEKDKKGKEMNRKFEFFDTNKQDITNMKKFMFEKNRDLIKTAYDCTMAAISICKPGVPFK 560 NIAKVMDDYLKKKNNSYQYYSIVPNLCGHNIGKNFHEEPFIIHTLNNDDRKMCENLVFTIEPIITERSCDFITWPDNWTL 640 SNSRYYYSAQFEHTILITKNGAKILTQKTETSPKYIWEND 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1229400 18 CGTFLCK|KN 0.056 . PY17X_1229400 19 GTFLCKK|NS 0.075 . PY17X_1229400 27 SNNSNFR|II 0.146 . PY17X_1229400 35 IHQNGTR|GN 0.084 . PY17X_1229400 39 GTRGNTK|RN 0.061 . PY17X_1229400 40 TRGNTKR|NV 0.480 . PY17X_1229400 43 NTKRNVK|CV 0.175 . PY17X_1229400 46 RNVKCVR|KK 0.091 . PY17X_1229400 47 NVKCVRK|KK 0.077 . PY17X_1229400 48 VKCVRKK|KQ 0.098 . PY17X_1229400 49 KCVRKKK|QY 0.341 . PY17X_1229400 61 HPNEVSK|ND 0.068 . PY17X_1229400 65 VSKNDIR|YH 0.089 . PY17X_1229400 79 ITTHTHK|KK 0.059 . PY17X_1229400 80 TTHTHKK|KL 0.125 . PY17X_1229400 81 THTHKKK|LA 0.117 . PY17X_1229400 84 HKKKLAK|KD 0.067 . PY17X_1229400 85 KKKLAKK|DK 0.130 . PY17X_1229400 87 KLAKKDK|FK 0.080 . PY17X_1229400 89 AKKDKFK|RR 0.062 . PY17X_1229400 90 KKDKFKR|RY 0.133 . PY17X_1229400 91 KDKFKRR|YN 0.173 . PY17X_1229400 110 TIHNNVK|KN 0.065 . PY17X_1229400 111 IHNNVKK|NT 0.112 . PY17X_1229400 126 QLPSYHK|YI 0.065 . PY17X_1229400 132 KYIENFK|TR 0.057 . PY17X_1229400 134 IENFKTR|KI 0.095 . PY17X_1229400 135 ENFKTRK|II 0.112 . PY17X_1229400 142 IIHPSIR|IT 0.119 . PY17X_1229400 148 RITDHDK|KF 0.062 . PY17X_1229400 149 ITDHDKK|FM 0.100 . PY17X_1229400 152 HDKKFMK|CK 0.073 . PY17X_1229400 154 KKFMKCK|ES 0.082 . PY17X_1229400 159 CKESYNK|LY 0.066 . PY17X_1229400 178 NFSYVGR|QR 0.097 . PY17X_1229400 180 SYVGRQR|KG 0.074 . PY17X_1229400 181 YVGRQRK|GI 0.175 . PY17X_1229400 187 KGILSPK|YY 0.065 . PY17X_1229400 192 PKYYLPK|YI 0.073 . PY17X_1229400 196 LPKYIDR|PN 0.100 . PY17X_1229400 201 DRPNYHK|TG 0.061 . PY17X_1229400 215 NYENNLK|SK 0.064 . PY17X_1229400 217 ENNLKSK|EH 0.070 . PY17X_1229400 223 KEHISIR|ND 0.100 . PY17X_1229400 235 NNETDEK|YH 0.065 . PY17X_1229400 238 TDEKYHK|TY 0.064 . PY17X_1229400 245 TYFTTNK|YE 0.066 . PY17X_1229400 252 YEYNNVK|SD 0.092 . PY17X_1229400 262 DIEIISR|NC 0.069 . PY17X_1229400 265 IISRNCK|FA 0.237 . PY17X_1229400 268 RNCKFAR|EL 0.139 . PY17X_1229400 294 DIYILNK|CV 0.069 . PY17X_1229400 312 NYHLFPK|SS 0.107 . PY17X_1229400 339 YENDIVK|VD 0.061 . PY17X_1229400 346 VDISVYK|DG 0.078 . PY17X_1229400 361 ESFIVQK|IS 0.060 . PY17X_1229400 364 IVQKISK|EE 0.059 . PY17X_1229400 367 KISKEEK|KK 0.071 . PY17X_1229400 368 ISKEEKK|KR 0.098 . PY17X_1229400 369 SKEEKKK|RK 0.091 . PY17X_1229400 370 KEEKKKR|KK 0.155 . PY17X_1229400 371 EEKKKRK|KN 0.098 . PY17X_1229400 372 EKKKRKK|NY 0.106 . PY17X_1229400 382 YIYLNDK|LR 0.055 . PY17X_1229400 384 YLNDKLR|TK 0.099 . PY17X_1229400 386 NDKLRTK|HT 0.064 . PY17X_1229400 389 LRTKHTK|YI 0.100 . PY17X_1229400 393 HTKYIIK|YN 0.074 . PY17X_1229400 402 FDLTTHK|IV 0.066 . PY17X_1229400 405 TTHKIVK|KG 0.054 . PY17X_1229400 406 THKIVKK|GK 0.130 . PY17X_1229400 408 KIVKKGK|YP 0.072 . PY17X_1229400 413 GKYPSVR|KV 0.143 . PY17X_1229400 414 KYPSVRK|VR 0.061 . PY17X_1229400 416 PSVRKVR|YN 0.268 . PY17X_1229400 423 YNPPNSK|EH 0.058 . PY17X_1229400 473 ELENFHR|RY 0.086 . PY17X_1229400 474 LENFHRR|YD 0.249 . PY17X_1229400 484 DFIFNPK|KG 0.055 . PY17X_1229400 485 FIFNPKK|GE 0.087 . PY17X_1229400 499 QQYIYQK|GM 0.070 . PY17X_1229400 503 YQKGMEK|DK 0.068 . PY17X_1229400 505 KGMEKDK|KG 0.062 . PY17X_1229400 506 GMEKDKK|GK 0.136 . PY17X_1229400 508 EKDKKGK|EM 0.068 . PY17X_1229400 512 KGKEMNR|KF 0.080 . PY17X_1229400 513 GKEMNRK|FE 0.081 . PY17X_1229400 521 EFFDTNK|QD 0.059 . PY17X_1229400 528 QDITNMK|KF 0.060 . PY17X_1229400 529 DITNMKK|FM 0.093 . PY17X_1229400 534 KKFMFEK|NR 0.064 . PY17X_1229400 536 FMFEKNR|DL 0.111 . PY17X_1229400 540 KNRDLIK|TA 0.077 . PY17X_1229400 554 AAISICK|PG 0.056 . PY17X_1229400 560 KPGVPFK|NI 0.087 . PY17X_1229400 564 PFKNIAK|VM 0.063 . PY17X_1229400 571 VMDDYLK|KK 0.054 . PY17X_1229400 572 MDDYLKK|KN 0.083 . PY17X_1229400 573 DDYLKKK|NN 0.110 . PY17X_1229400 593 CGHNIGK|NF 0.069 . PY17X_1229400 610 TLNNDDR|KM 0.100 . PY17X_1229400 611 LNNDDRK|MC 0.112 . PY17X_1229400 627 EPIITER|SC 0.118 . PY17X_1229400 644 WTLSNSR|YY 0.084 . PY17X_1229400 659 HTILITK|NG 0.061 . PY17X_1229400 663 ITKNGAK|IL 0.073 . PY17X_1229400 668 AKILTQK|TE 0.055 . PY17X_1229400 674 KTETSPK|YI 0.072 . ____________________________^_________________

  • Fasta :-

    >PY17X_1229400 ATGAACGTTCATATTTTCTTGTTACTACTTTTTTGTGGTACATTTTTATGCAAAAAAAAT AGTAATAATAGCAATTTTCGAATTATACACCAAAATGGGACAAGAGGAAACACAAAAAGA AATGTAAAATGTGTAAGAAAAAAGAAACAATATAATTATATACATCCCAATGAAGTTAGT AAAAATGACATCCGTTATCATCATTACAATTTTTTTATAACTACACACACACACAAAAAA AAACTAGCCAAAAAGGATAAATTTAAGAGGCGATATAACCTTAACAGTTCAGGCGAAGGA TTTTCAAACACAATCCATAATAATGTTAAAAAAAACACAAACAATTATTCAGAAGAACAA TTACCATCATATCATAAATACATTGAAAATTTCAAAACAAGAAAAATTATTCATCCAAGT ATAAGAATAACAGATCATGACAAAAAATTTATGAAATGTAAAGAAAGTTATAATAAATTA TATTCACATTTAACAGAAACTGAATTATTTGAAAACTTTTCATATGTTGGTAGACAAAGA AAAGGTATATTATCTCCAAAATATTATTTACCAAAATATATTGATAGGCCAAATTATCAT AAAACAGGTACACCTATTTATGTAAATTATGAAAATAATTTAAAATCGAAAGAACATATA TCAATTAGAAATGATGATAATAATAATAATGAAACGGACGAAAAATATCATAAAACATAT TTTACTACAAACAAATATGAATATAATAATGTAAAAAGTGATTATGATATTGAAATAATT TCAAGAAATTGTAAATTTGCTAGAGAATTAATGGATGATATATCATATATAATATGTGAA GGTATAACAACTAATGATATAGATATATATATATTAAATAAATGTGTGAACAATGGATTC TATCCCTCTCCATTAAATTATCACTTATTTCCTAAAAGCTCATGTATATCAATAAATGAA ATATTATGTCATGGTATACCAGATAATAATGTTTTATATGAAAATGATATTGTAAAGGTT GATATAAGTGTGTATAAAGATGGGTATCATGCTGATATGTGTGAAAGTTTTATTGTTCAA AAGATTTCAAAAGAAGAAAAAAAAAAACGGAAAAAAAATTATGACTATATATATTTAAAT GATAAACTTAGAACTAAACATACAAAATATATTATAAAATATAATTTCGATTTAACAACA CATAAAATAGTTAAAAAAGGGAAATATCCATCTGTTAGAAAAGTTAGATATAATCCACCA AATTCGAAAGAACATGAAAATGAATATATAGAAGAATATGACGATAATACTAACTCAGTT TTTGGAGAAAATTCATATAATAATAATTATTATACATATAATGATGACCCAAATAATGTT TCTGAAAATTATGAAGACGAACTTGAAAATTTTCATCGTAGATATGATGAAGATTTTATT TTTAATCCTAAAAAAGGAGAACTATACAATAATCTTCAACAATATATTTATCAAAAGGGA ATGGAAAAGGATAAAAAAGGAAAAGAAATGAATAGAAAATTTGAATTTTTTGATACAAAT AAACAAGATATAACGAATATGAAAAAATTCATGTTTGAAAAAAATAGAGATTTAATTAAA ACTGCTTATGATTGTACTATGGCAGCTATAAGTATATGTAAGCCTGGTGTTCCTTTTAAA AATATAGCAAAAGTTATGGATGATTATTTAAAAAAAAAAAATAATTCGTATCAATATTAT TCTATTGTTCCCAATTTATGTGGACATAATATTGGAAAAAATTTTCATGAAGAACCTTTT ATTATACATACATTAAATAACGATGATAGAAAAATGTGTGAAAACTTAGTTTTTACAATC GAGCCAATTATAACAGAACGTTCTTGTGATTTTATTACTTGGCCCGATAATTGGACATTA TCAAATTCAAGGTATTATTATTCTGCTCAATTTGAACACACCATCCTTATCACAAAAAAT GGGGCCAAAATTCTTACACAAAAAACAGAGACATCCCCAAAGTACATATGGGAAAACGAT TGA
  • Download Fasta

  • Fasta :-

    MNVHIFLLLLFCGTFLCKKNSNNSNFRIIHQNGTRGNTKRNVKCVRKKKQYNYIHPNEVS KNDIRYHHYNFFITTHTHKKKLAKKDKFKRRYNLNSSGEGFSNTIHNNVKKNTNNYSEEQ LPSYHKYIENFKTRKIIHPSIRITDHDKKFMKCKESYNKLYSHLTETELFENFSYVGRQR KGILSPKYYLPKYIDRPNYHKTGTPIYVNYENNLKSKEHISIRNDDNNNNETDEKYHKTY FTTNKYEYNNVKSDYDIEIISRNCKFARELMDDISYIICEGITTNDIDIYILNKCVNNGF YPSPLNYHLFPKSSCISINEILCHGIPDNNVLYENDIVKVDISVYKDGYHADMCESFIVQ KISKEEKKKRKKNYDYIYLNDKLRTKHTKYIIKYNFDLTTHKIVKKGKYPSVRKVRYNPP NSKEHENEYIEEYDDNTNSVFGENSYNNNYYTYNDDPNNVSENYEDELENFHRRYDEDFI FNPKKGELYNNLQQYIYQKGMEKDKKGKEMNRKFEFFDTNKQDITNMKKFMFEKNRDLIK TAYDCTMAAISICKPGVPFKNIAKVMDDYLKKKNNSYQYYSIVPNLCGHNIGKNFHEEPF IIHTLNNDDRKMCENLVFTIEPIITERSCDFITWPDNWTLSNSRYYYSAQFEHTILITKN GAKILTQKTETSPKYIWEND

    No Results
  • title: active site
  • coordinates: H324,D341,D352,H589,E621,E652
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1229400253 SNNVKSDYDI0.994unspPY17X_1229400363 SVQKISKEEK0.996unsp
PY17X_1229400


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India