PY17X_1235900 | eukaryotic translation initiation factor 3 subunit B, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1235900OTHER0.9999040.0000750.000021
No Results

  • Fasta :-

    >PY17X_1235900 MVKVEESELSDKELVDFLSDDSDDGNETLLNKKYAGKEALITLETKFPKIVTILGIPKVE EEKHSRLAEVLKKLFIRHLSAKISDSSIMNIKIYMPVDEEKKTKGICFVTFHDSFQANEA VKVLNKLKLDAKHLLTASKMDDIENIINRDERVMPINVVGFTREKIRWWLYDEKCREQFI VRYDTHFEVHWLDPLEKEPQLIYTTFKKNAPFSSVQWSNQGSYLVSFHNPGIALWGGDNF EKLIRLQHKSVKDISFSPNENYVLTWDGTPASLRNEKSICIWRVITGKLLRSFITPEYSP REKIFPHFLWSPDDKYIACIGKQKEVYIYELPSMLLLEDHEKKRTPLKYSVVKEFDWSPV DNIVAIWIPETNNTPGTLILVEIPSRKELVSRKIYDVSQASIHWQSKGDYLCLKTTIVKK IGKKGKKEHTQLEIFRMREKNIPVDNIQIEGVKTKQFHWEESNSNRFALIVRDEATSRQQ IRFYKILNKGTTRNVKWTSTFDINNQMNFMKWSPQGTFFILASLLSEGMLYFCFLNSNDQ VEVIHKDEHLLVNSVAWSNCGRYLVTSVSNLSGISSSNYKEENSETGFYVWTFQGRCLMT IKKPSFFQFFFRPHPKSLFSDKLKIDIKNNLKDYSKKFDVIDEKIRNSKKNQLISERQNV ENSFNEKLEKITKLFQSFKEYELFRRNWETFESQFEWEEKTIVIEHVLSVKQEIFA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1235900.fa Sequence name : PY17X_1235900 Sequence length : 716 VALUES OF COMPUTED PARAMETERS Coef20 : 3.355 CoefTot : -0.113 ChDiff : 8 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.729 1.841 0.275 0.694 MesoH : -0.246 0.267 -0.351 0.226 MuHd_075 : 24.353 16.058 7.463 4.690 MuHd_095 : 18.106 9.033 4.943 2.926 MuHd_100 : 19.050 9.081 5.255 2.103 MuHd_105 : 25.232 14.501 6.527 4.175 Hmax_075 : 4.667 13.650 0.148 4.060 Hmax_095 : -0.962 9.275 -1.738 3.447 Hmax_100 : -5.400 8.200 -2.176 2.580 Hmax_105 : 6.700 12.200 0.108 4.060 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9451 0.0549 DFMC : 0.9689 0.0311
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 716 PY17X_1235900 MVKVEESELSDKELVDFLSDDSDDGNETLLNKKYAGKEALITLETKFPKIVTILGIPKVEEEKHSRLAEVLKKLFIRHLS 80 AKISDSSIMNIKIYMPVDEEKKTKGICFVTFHDSFQANEAVKVLNKLKLDAKHLLTASKMDDIENIINRDERVMPINVVG 160 FTREKIRWWLYDEKCREQFIVRYDTHFEVHWLDPLEKEPQLIYTTFKKNAPFSSVQWSNQGSYLVSFHNPGIALWGGDNF 240 EKLIRLQHKSVKDISFSPNENYVLTWDGTPASLRNEKSICIWRVITGKLLRSFITPEYSPREKIFPHFLWSPDDKYIACI 320 GKQKEVYIYELPSMLLLEDHEKKRTPLKYSVVKEFDWSPVDNIVAIWIPETNNTPGTLILVEIPSRKELVSRKIYDVSQA 400 SIHWQSKGDYLCLKTTIVKKIGKKGKKEHTQLEIFRMREKNIPVDNIQIEGVKTKQFHWEESNSNRFALIVRDEATSRQQ 480 IRFYKILNKGTTRNVKWTSTFDINNQMNFMKWSPQGTFFILASLLSEGMLYFCFLNSNDQVEVIHKDEHLLVNSVAWSNC 560 GRYLVTSVSNLSGISSSNYKEENSETGFYVWTFQGRCLMTIKKPSFFQFFFRPHPKSLFSDKLKIDIKNNLKDYSKKFDV 640 IDEKIRNSKKNQLISERQNVENSFNEKLEKITKLFQSFKEYELFRRNWETFESQFEWEEKTIVIEHVLSVKQEIFA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................................................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1235900 3 ----MVK|VE 0.061 . PY17X_1235900 12 ESELSDK|EL 0.060 . PY17X_1235900 32 NETLLNK|KY 0.057 . PY17X_1235900 33 ETLLNKK|YA 0.112 . PY17X_1235900 37 NKKYAGK|EA 0.072 . PY17X_1235900 46 LITLETK|FP 0.059 . PY17X_1235900 49 LETKFPK|IV 0.081 . PY17X_1235900 58 TILGIPK|VE 0.057 . PY17X_1235900 63 PKVEEEK|HS 0.061 . PY17X_1235900 66 EEEKHSR|LA 0.094 . PY17X_1235900 72 RLAEVLK|KL 0.067 . PY17X_1235900 73 LAEVLKK|LF 0.093 . PY17X_1235900 77 LKKLFIR|HL 0.143 . PY17X_1235900 82 IRHLSAK|IS 0.104 . PY17X_1235900 92 SSIMNIK|IY 0.069 . PY17X_1235900 101 MPVDEEK|KT 0.068 . PY17X_1235900 102 PVDEEKK|TK 0.095 . PY17X_1235900 104 DEEKKTK|GI 0.082 . PY17X_1235900 122 QANEAVK|VL 0.062 . PY17X_1235900 126 AVKVLNK|LK 0.057 . PY17X_1235900 128 KVLNKLK|LD 0.064 . PY17X_1235900 132 KLKLDAK|HL 0.067 . PY17X_1235900 139 HLLTASK|MD 0.061 . PY17X_1235900 149 IENIINR|DE 0.101 . PY17X_1235900 152 IINRDER|VM 0.205 . PY17X_1235900 163 NVVGFTR|EK 0.073 . PY17X_1235900 165 VGFTREK|IR 0.054 . PY17X_1235900 167 FTREKIR|WW 0.100 . PY17X_1235900 174 WWLYDEK|CR 0.060 . PY17X_1235900 176 LYDEKCR|EQ 0.085 . PY17X_1235900 182 REQFIVR|YD 0.100 . PY17X_1235900 197 WLDPLEK|EP 0.060 . PY17X_1235900 207 LIYTTFK|KN 0.060 . PY17X_1235900 208 IYTTFKK|NA 0.089 . PY17X_1235900 242 GGDNFEK|LI 0.063 . PY17X_1235900 245 NFEKLIR|LQ 0.083 . PY17X_1235900 249 LIRLQHK|SV 0.147 . PY17X_1235900 252 LQHKSVK|DI 0.100 . PY17X_1235900 274 GTPASLR|NE 0.069 . PY17X_1235900 277 ASLRNEK|SI 0.200 . PY17X_1235900 283 KSICIWR|VI 0.096 . PY17X_1235900 288 WRVITGK|LL 0.066 . PY17X_1235900 291 ITGKLLR|SF 0.127 . PY17X_1235900 301 TPEYSPR|EK 0.084 . PY17X_1235900 303 EYSPREK|IF 0.066 . PY17X_1235900 315 LWSPDDK|YI 0.107 . PY17X_1235900 322 YIACIGK|QK 0.068 . PY17X_1235900 324 ACIGKQK|EV 0.078 . PY17X_1235900 342 LLEDHEK|KR 0.059 . PY17X_1235900 343 LEDHEKK|RT 0.079 . PY17X_1235900 344 EDHEKKR|TP 0.137 . PY17X_1235900 348 KKRTPLK|YS 0.083 . PY17X_1235900 353 LKYSVVK|EF 0.070 . PY17X_1235900 386 LVEIPSR|KE 0.069 . PY17X_1235900 387 VEIPSRK|EL 0.067 . PY17X_1235900 392 RKELVSR|KI 0.110 . PY17X_1235900 393 KELVSRK|IY 0.100 . PY17X_1235900 407 SIHWQSK|GD 0.076 . PY17X_1235900 414 GDYLCLK|TT 0.064 . PY17X_1235900 419 LKTTIVK|KI 0.071 . PY17X_1235900 420 KTTIVKK|IG 0.090 . PY17X_1235900 423 IVKKIGK|KG 0.062 . PY17X_1235900 424 VKKIGKK|GK 0.089 . PY17X_1235900 426 KIGKKGK|KE 0.090 . PY17X_1235900 427 IGKKGKK|EH 0.100 . PY17X_1235900 436 TQLEIFR|MR 0.100 . PY17X_1235900 438 LEIFRMR|EK 0.085 . PY17X_1235900 440 IFRMREK|NI 0.062 . PY17X_1235900 453 IQIEGVK|TK 0.054 . PY17X_1235900 455 IEGVKTK|QF 0.090 . PY17X_1235900 466 EESNSNR|FA 0.170 . PY17X_1235900 472 RFALIVR|DE 0.102 . PY17X_1235900 478 RDEATSR|QQ 0.078 . PY17X_1235900 482 TSRQQIR|FY 0.143 . PY17X_1235900 485 QQIRFYK|IL 0.169 . PY17X_1235900 489 FYKILNK|GT 0.066 . PY17X_1235900 493 LNKGTTR|NV 0.091 . PY17X_1235900 496 GTTRNVK|WT 0.120 . PY17X_1235900 511 NQMNFMK|WS 0.081 . PY17X_1235900 546 QVEVIHK|DE 0.064 . PY17X_1235900 562 AWSNCGR|YL 0.121 . PY17X_1235900 580 ISSSNYK|EE 0.065 . PY17X_1235900 596 VWTFQGR|CL 0.098 . PY17X_1235900 602 RCLMTIK|KP 0.060 . PY17X_1235900 603 CLMTIKK|PS 0.093 . PY17X_1235900 612 FFQFFFR|PH 0.111 . PY17X_1235900 616 FFRPHPK|SL 0.081 . PY17X_1235900 622 KSLFSDK|LK 0.071 . PY17X_1235900 624 LFSDKLK|ID 0.065 . PY17X_1235900 628 KLKIDIK|NN 0.056 . PY17X_1235900 632 DIKNNLK|DY 0.073 . PY17X_1235900 636 NLKDYSK|KF 0.062 . PY17X_1235900 637 LKDYSKK|FD 0.108 . PY17X_1235900 644 FDVIDEK|IR 0.058 . PY17X_1235900 646 VIDEKIR|NS 0.077 . PY17X_1235900 649 EKIRNSK|KN 0.093 . PY17X_1235900 650 KIRNSKK|NQ 0.114 . PY17X_1235900 657 NQLISER|QN 0.072 . PY17X_1235900 667 ENSFNEK|LE 0.058 . PY17X_1235900 670 FNEKLEK|IT 0.059 . PY17X_1235900 673 KLEKITK|LF 0.057 . PY17X_1235900 679 KLFQSFK|EY 0.066 . PY17X_1235900 685 KEYELFR|RN 0.087 . PY17X_1235900 686 EYELFRR|NW 0.169 . PY17X_1235900 700 QFEWEEK|TI 0.061 . PY17X_1235900 711 EHVLSVK|QE 0.060 . ____________________________^_________________

  • Fasta :-

    >PY17X_1235900 ATGGTTAAAGTTGAAGAAAGTGAATTAAGCGACAAAGAACTTGTCGATTTTTTATCTGAT GATAGTGATGATGGGAATGAAACATTGTTAAATAAAAAATATGCAGGAAAAGAAGCTTTG ATTACTCTTGAAACTAAGTTTCCTAAAATAGTTACAATATTGGGTATACCAAAAGTAGAA GAAGAAAAACATAGTAGATTAGCCGAAGTTTTAAAGAAATTATTTATAAGGCATTTAAGT GCTAAAATAAGTGACTCTTCAATAATGAATATAAAAATTTATATGCCTGTTGATGAAGAA AAAAAAACAAAAGGAATATGTTTTGTTACATTTCATGATAGTTTTCAAGCAAATGAAGCA GTAAAAGTATTAAATAAATTAAAATTAGATGCAAAACATTTATTAACAGCATCAAAAATG GATGATATAGAAAATATAATAAATAGAGATGAACGTGTAATGCCTATAAATGTTGTTGGA TTTACAAGAGAAAAAATAAGATGGTGGTTATATGATGAAAAATGTAGAGAACAATTTATT GTTAGATATGATACCCATTTTGAAGTTCATTGGTTAGACCCATTAGAAAAAGAACCACAA TTAATTTATACTACATTTAAAAAAAATGCTCCATTTTCAAGTGTTCAATGGAGTAATCAA GGATCATACTTAGTCAGTTTTCATAATCCAGGTATAGCATTATGGGGTGGAGATAATTTT GAAAAATTAATAAGATTACAACATAAAAGTGTTAAAGATATAAGTTTTTCACCTAATGAA AATTATGTACTAACTTGGGATGGTACTCCTGCTTCATTAAGAAATGAAAAATCTATTTGT ATATGGAGAGTAATAACAGGAAAATTGCTTCGATCTTTTATTACACCTGAATATAGTCCA AGAGAAAAAATATTTCCTCATTTTTTATGGAGCCCTGATGATAAATATATTGCATGTATA GGAAAGCAAAAAGAAGTATATATATATGAATTACCATCTATGTTATTATTAGAAGATCAT GAGAAAAAAAGAACCCCGTTAAAATATTCTGTGGTTAAAGAATTTGATTGGTCTCCTGTA GATAATATAGTTGCAATTTGGATACCAGAAACAAATAATACACCCGGAACTTTGATATTA GTCGAAATACCATCAAGAAAAGAATTAGTATCTCGAAAAATTTATGATGTTAGTCAGGCA TCTATTCATTGGCAAAGTAAAGGAGATTATTTATGTCTTAAAACAACTATTGTAAAAAAA ATTGGAAAAAAAGGAAAAAAAGAACACACACAATTAGAAATTTTCAGAATGAGAGAAAAA AATATACCTGTAGATAATATACAAATTGAAGGAGTAAAAACTAAACAATTTCATTGGGAA GAATCAAATAGTAATAGATTTGCATTAATAGTAAGAGATGAAGCTACAAGTAGACAACAA ATTAGATTTTATAAAATATTAAATAAAGGTACTACTAGAAATGTTAAATGGACTAGTACT TTTGATATAAATAACCAAATGAATTTTATGAAATGGTCACCACAAGGAACATTTTTTATA TTAGCATCTTTATTATCAGAAGGAATGTTATATTTCTGTTTTTTAAATTCAAATGATCAA GTTGAAGTTATACATAAGGATGAGCATTTATTAGTAAATTCTGTTGCATGGAGTAATTGT GGTAGATACTTAGTTACATCTGTTTCTAATTTATCTGGTATATCAAGTTCTAATTATAAA GAAGAAAATAGTGAAACTGGTTTTTATGTATGGACATTTCAAGGTAGATGTTTAATGACT ATTAAAAAACCATCATTTTTCCAATTTTTCTTTCGACCTCATCCTAAATCATTATTTAGT GATAAATTGAAAATTGATATAAAAAATAATCTAAAAGATTATTCTAAAAAATTTGATGTT ATAGATGAAAAAATTCGAAATTCTAAAAAGAACCAATTAATTTCAGAAAGACAAAATGTT GAAAATTCATTTAATGAAAAATTGGAAAAAATCACAAAATTATTCCAATCCTTTAAAGAA TATGAATTGTTCAGAAGAAATTGGGAAACATTTGAAAGCCAATTTGAGTGGGAAGAAAAA ACAATTGTTATTGAACATGTCCTTTCTGTCAAGCAAGAAATCTTTGCATAG
  • Download Fasta

  • Fasta :-

    MVKVEESELSDKELVDFLSDDSDDGNETLLNKKYAGKEALITLETKFPKIVTILGIPKVE EEKHSRLAEVLKKLFIRHLSAKISDSSIMNIKIYMPVDEEKKTKGICFVTFHDSFQANEA VKVLNKLKLDAKHLLTASKMDDIENIINRDERVMPINVVGFTREKIRWWLYDEKCREQFI VRYDTHFEVHWLDPLEKEPQLIYTTFKKNAPFSSVQWSNQGSYLVSFHNPGIALWGGDNF EKLIRLQHKSVKDISFSPNENYVLTWDGTPASLRNEKSICIWRVITGKLLRSFITPEYSP REKIFPHFLWSPDDKYIACIGKQKEVYIYELPSMLLLEDHEKKRTPLKYSVVKEFDWSPV DNIVAIWIPETNNTPGTLILVEIPSRKELVSRKIYDVSQASIHWQSKGDYLCLKTTIVKK IGKKGKKEHTQLEIFRMREKNIPVDNIQIEGVKTKQFHWEESNSNRFALIVRDEATSRQQ IRFYKILNKGTTRNVKWTSTFDINNQMNFMKWSPQGTFFILASLLSEGMLYFCFLNSNDQ VEVIHKDEHLLVNSVAWSNCGRYLVTSVSNLSGISSSNYKEENSETGFYVWTFQGRCLMT IKKPSFFQFFFRPHPKSLFSDKLKIDIKNNLKDYSKKFDVIDEKIRNSKKNQLISERQNV ENSFNEKLEKITKLFQSFKEYELFRRNWETFESQFEWEEKTIVIEHVLSVKQEIFA

  • title: polypeptide substrate binding site
  • coordinates: I53,I56,K63,R66,L67,E69,V70,L71,K73,L74,R77,V123,L124,N125,K126,K128,L129,L134,L135
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1235900257 SDISFSPNEN0.991unspPY17X_1235900257 SDISFSPNEN0.991unspPY17X_1235900257 SDISFSPNEN0.991unspPY17X_1235900299 STPEYSPREK0.996unspPY17X_1235900358 SEFDWSPVDN0.994unspPY17X_1235900648 SKIRNSKKNQ0.997unspPY17X_1235900677 SKLFQSFKEY0.994unspPY17X_123590010 SESELSDKEL0.997unspPY17X_1235900250 SLQHKSVKDI0.997unsp
PY17X_1235900


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India