PY17X_1245200 | ubiquitin carboxyl-terminal hydrolase 14, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1245200OTHER0.9990590.0001300.000811
No Results

  • Fasta :-

    >PY17X_1245200 MIKMTIVKVTVKWKTNIYNDLELNINEPVALFKEQLWKLTAVPPEKQKLMYKGLIKDDTN LQTLNIKNNDKIMLVGSSESLAEKPDKITFLEDLSKEDKEKLNQNKNIIFEDQGIVNLGN TCYFNAVLQFLTSFNDLGEFLSNIKKTQNIGFRSNKDILFDSYIHFSKTFGKSSEPYVPL ELLKAFRDVFPKFKTINVRTKQYAQQDAEECMNAILTSLNDHTESKIIDKLFSFKIIGKI KCVEQEETQKKENSQKKENSQEKEQFELTEEKHNKLICYMGTQSTPVNNLHEGIRLSLIE KIKKKKNENDKEDTLYEKKSEIDSLPPYLIIHFLRFESKRIVDTSNTVSVVTAKICRKVS FPENFDIYDFCSDNVKADLKIARNITMNRKDIKTSIIQENTNEDNKSSDNLINQDDKKIE FVEIPNGEYELISVITHKGRNEESGHYIAWKKMRNCINKDSEYDNNGPRTKKNKSNNEPT WFKMDDDKVSLHNFSSLDLFGGCSDYNTAVLLLYKRKTLSCTQDEINKYST
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1245200.fa Sequence name : PY17X_1245200 Sequence length : 531 VALUES OF COMPUTED PARAMETERS Coef20 : 4.112 CoefTot : -0.877 ChDiff : 1 ZoneTo : 19 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.900 1.076 -0.021 0.454 MesoH : -0.921 0.016 -0.534 0.143 MuHd_075 : 23.694 15.154 7.783 3.735 MuHd_095 : 21.885 17.084 7.465 6.232 MuHd_100 : 15.517 14.615 5.309 5.048 MuHd_105 : 9.924 9.419 3.120 3.055 Hmax_075 : 14.817 15.400 1.842 4.165 Hmax_095 : 16.200 15.400 2.593 6.010 Hmax_100 : 10.200 12.600 0.688 5.280 Hmax_105 : 3.617 11.200 -0.916 3.687 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7340 0.2660 DFMC : 0.6852 0.3148
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 531 PY17X_1245200 MIKMTIVKVTVKWKTNIYNDLELNINEPVALFKEQLWKLTAVPPEKQKLMYKGLIKDDTNLQTLNIKNNDKIMLVGSSES 80 LAEKPDKITFLEDLSKEDKEKLNQNKNIIFEDQGIVNLGNTCYFNAVLQFLTSFNDLGEFLSNIKKTQNIGFRSNKDILF 160 DSYIHFSKTFGKSSEPYVPLELLKAFRDVFPKFKTINVRTKQYAQQDAEECMNAILTSLNDHTESKIIDKLFSFKIIGKI 240 KCVEQEETQKKENSQKKENSQEKEQFELTEEKHNKLICYMGTQSTPVNNLHEGIRLSLIEKIKKKKNENDKEDTLYEKKS 320 EIDSLPPYLIIHFLRFESKRIVDTSNTVSVVTAKICRKVSFPENFDIYDFCSDNVKADLKIARNITMNRKDIKTSIIQEN 400 TNEDNKSSDNLINQDDKKIEFVEIPNGEYELISVITHKGRNEESGHYIAWKKMRNCINKDSEYDNNGPRTKKNKSNNEPT 480 WFKMDDDKVSLHNFSSLDLFGGCSDYNTAVLLLYKRKTLSCTQDEINKYST 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...................P............................................................ 400 ................................................................................ 480 ................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PY17X_1245200 3 ----MIK|MT 0.068 . PY17X_1245200 8 IKMTIVK|VT 0.060 . PY17X_1245200 12 IVKVTVK|WK 0.063 . PY17X_1245200 14 KVTVKWK|TN 0.061 . PY17X_1245200 33 EPVALFK|EQ 0.066 . PY17X_1245200 38 FKEQLWK|LT 0.058 . PY17X_1245200 46 TAVPPEK|QK 0.059 . PY17X_1245200 48 VPPEKQK|LM 0.064 . PY17X_1245200 52 KQKLMYK|GL 0.069 . PY17X_1245200 56 MYKGLIK|DD 0.063 . PY17X_1245200 67 LQTLNIK|NN 0.062 . PY17X_1245200 71 NIKNNDK|IM 0.057 . PY17X_1245200 84 SESLAEK|PD 0.060 . PY17X_1245200 87 LAEKPDK|IT 0.068 . PY17X_1245200 96 FLEDLSK|ED 0.062 . PY17X_1245200 99 DLSKEDK|EK 0.063 . PY17X_1245200 101 SKEDKEK|LN 0.067 . PY17X_1245200 106 EKLNQNK|NI 0.067 . PY17X_1245200 145 EFLSNIK|KT 0.056 . PY17X_1245200 146 FLSNIKK|TQ 0.106 . PY17X_1245200 153 TQNIGFR|SN 0.214 . PY17X_1245200 156 IGFRSNK|DI 0.119 . PY17X_1245200 168 SYIHFSK|TF 0.068 . PY17X_1245200 172 FSKTFGK|SS 0.111 . PY17X_1245200 184 VPLELLK|AF 0.069 . PY17X_1245200 187 ELLKAFR|DV 0.198 . PY17X_1245200 192 FRDVFPK|FK 0.082 . PY17X_1245200 194 DVFPKFK|TI 0.065 . PY17X_1245200 199 FKTINVR|TK 0.083 . PY17X_1245200 201 TINVRTK|QY 0.089 . PY17X_1245200 226 NDHTESK|II 0.074 . PY17X_1245200 230 ESKIIDK|LF 0.065 . PY17X_1245200 235 DKLFSFK|II 0.081 . PY17X_1245200 239 SFKIIGK|IK 0.063 . PY17X_1245200 241 KIIGKIK|CV 0.133 . PY17X_1245200 250 EQEETQK|KE 0.057 . PY17X_1245200 251 QEETQKK|EN 0.131 . PY17X_1245200 256 KKENSQK|KE 0.071 . PY17X_1245200 257 KENSQKK|EN 0.186 . PY17X_1245200 263 KENSQEK|EQ 0.066 . PY17X_1245200 272 FELTEEK|HN 0.057 . PY17X_1245200 275 TEEKHNK|LI 0.089 . PY17X_1245200 295 NLHEGIR|LS 0.069 . PY17X_1245200 301 RLSLIEK|IK 0.062 . PY17X_1245200 303 SLIEKIK|KK 0.063 . PY17X_1245200 304 LIEKIKK|KK 0.079 . PY17X_1245200 305 IEKIKKK|KN 0.104 . PY17X_1245200 306 EKIKKKK|NE 0.144 . PY17X_1245200 311 KKNENDK|ED 0.066 . PY17X_1245200 318 EDTLYEK|KS 0.054 . PY17X_1245200 319 DTLYEKK|SE 0.109 . PY17X_1245200 335 LIIHFLR|FE 0.122 . PY17X_1245200 339 FLRFESK|RI 0.066 . PY17X_1245200 340 LRFESKR|IV 0.502 *ProP* PY17X_1245200 354 VSVVTAK|IC 0.069 . PY17X_1245200 357 VTAKICR|KV 0.118 . PY17X_1245200 358 TAKICRK|VS 0.087 . PY17X_1245200 376 FCSDNVK|AD 0.062 . PY17X_1245200 380 NVKADLK|IA 0.064 . PY17X_1245200 383 ADLKIAR|NI 0.103 . PY17X_1245200 389 RNITMNR|KD 0.073 . PY17X_1245200 390 NITMNRK|DI 0.105 . PY17X_1245200 393 MNRKDIK|TS 0.085 . PY17X_1245200 406 NTNEDNK|SS 0.077 . PY17X_1245200 417 LINQDDK|KI 0.070 . PY17X_1245200 418 INQDDKK|IE 0.104 . PY17X_1245200 438 ISVITHK|GR 0.067 . PY17X_1245200 440 VITHKGR|NE 0.090 . PY17X_1245200 451 GHYIAWK|KM 0.065 . PY17X_1245200 452 HYIAWKK|MR 0.096 . PY17X_1245200 454 IAWKKMR|NC 0.114 . PY17X_1245200 459 MRNCINK|DS 0.096 . PY17X_1245200 469 YDNNGPR|TK 0.077 . PY17X_1245200 471 NNGPRTK|KN 0.059 . PY17X_1245200 472 NGPRTKK|NK 0.349 . PY17X_1245200 474 PRTKKNK|SN 0.091 . PY17X_1245200 483 NEPTWFK|MD 0.067 . PY17X_1245200 488 FKMDDDK|VS 0.061 . PY17X_1245200 515 AVLLLYK|RK 0.052 . PY17X_1245200 516 VLLLYKR|KT 0.100 . PY17X_1245200 517 LLLYKRK|TL 0.098 . PY17X_1245200 528 TQDEINK|YS 0.062 . ____________________________^_________________

  • Fasta :-

    >PY17X_1245200 ATGATAAAAATGACGATAGTTAAGGTAACTGTCAAATGGAAAACGAATATTTATAATGAT CTTGAGCTCAATATAAATGAGCCAGTAGCATTGTTTAAAGAGCAGTTATGGAAATTAACT GCCGTACCACCAGAAAAACAAAAACTAATGTACAAAGGATTAATAAAAGATGATACCAAT TTGCAAACATTAAATATAAAAAATAATGACAAAATAATGTTAGTAGGATCATCAGAATCA TTGGCTGAAAAACCTGATAAAATTACATTTTTAGAAGATTTATCAAAAGAAGATAAAGAA AAATTAAATCAAAATAAAAATATTATTTTTGAAGATCAAGGTATAGTAAATTTAGGAAAT ACTTGTTATTTTAATGCAGTTTTGCAATTTTTGACTTCTTTTAATGATTTAGGAGAATTC CTAAGTAATATAAAAAAAACACAAAATATTGGGTTCAGATCAAATAAAGATATTTTATTC GATTCTTATATACATTTTTCTAAAACTTTTGGAAAATCATCTGAGCCTTATGTTCCATTA GAATTATTAAAAGCCTTTAGAGATGTTTTCCCAAAATTTAAAACTATTAATGTAAGAACA AAACAATATGCACAACAAGATGCAGAAGAATGCATGAATGCGATTCTAACATCATTAAAT GATCATACAGAATCAAAAATTATTGATAAACTTTTCTCATTTAAAATAATTGGAAAAATT AAATGTGTAGAACAAGAAGAAACACAAAAAAAAGAAAACTCGCAAAAAAAAGAAAATTCG CAAGAAAAAGAACAATTTGAATTAACAGAAGAAAAACATAATAAACTAATTTGTTATATG GGAACACAAAGTACCCCAGTAAATAATCTTCATGAAGGTATTAGATTATCATTAATAGAA AAAATTAAAAAAAAAAAAAATGAAAATGATAAAGAAGATACATTATATGAAAAAAAATCA GAAATAGATTCATTACCTCCTTATTTAATTATACATTTTTTACGATTTGAATCAAAACGA ATTGTAGATACAAGTAATACAGTTTCTGTTGTTACTGCCAAAATATGTAGAAAAGTTTCC TTTCCAGAAAATTTTGATATATATGATTTTTGTTCTGATAATGTAAAAGCTGATTTAAAA ATTGCTAGAAATATTACAATGAATCGAAAAGATATTAAAACATCTATTATTCAAGAAAAC ACAAATGAAGACAATAAATCTTCTGACAATTTGATTAACCAAGATGATAAAAAAATAGAA TTTGTTGAAATTCCAAATGGAGAATATGAACTAATTTCAGTTATTACACATAAAGGAAGA AATGAAGAAAGTGGTCATTATATTGCATGGAAAAAAATGAGAAATTGTATAAATAAAGAT TCAGAATATGATAATAATGGTCCTAGAACTAAAAAAAATAAAAGTAATAATGAACCAACA TGGTTTAAAATGGATGATGATAAAGTGAGTCTTCACAATTTTTCTTCTCTTGATTTATTT GGAGGATGCAGTGATTATAACACCGCTGTTTTGTTATTATACAAAAGGAAAACACTATCT TGTACTCAAGATGAAATAAACAAATATTCTACGTGA
  • Download Fasta

  • Fasta :-

    MIKMTIVKVTVKWKTNIYNDLELNINEPVALFKEQLWKLTAVPPEKQKLMYKGLIKDDTN LQTLNIKNNDKIMLVGSSESLAEKPDKITFLEDLSKEDKEKLNQNKNIIFEDQGIVNLGN TCYFNAVLQFLTSFNDLGEFLSNIKKTQNIGFRSNKDILFDSYIHFSKTFGKSSEPYVPL ELLKAFRDVFPKFKTINVRTKQYAQQDAEECMNAILTSLNDHTESKIIDKLFSFKIIGKI KCVEQEETQKKENSQKKENSQEKEQFELTEEKHNKLICYMGTQSTPVNNLHEGIRLSLIE KIKKKKNENDKEDTLYEKKSEIDSLPPYLIIHFLRFESKRIVDTSNTVSVVTAKICRKVS FPENFDIYDFCSDNVKADLKIARNITMNRKDIKTSIIQENTNEDNKSSDNLINQDDKKIE FVEIPNGEYELISVITHKGRNEESGHYIAWKKMRNCINKDSEYDNNGPRTKKNKSNNEPT WFKMDDDKVSLHNFSSLDLFGGCSDYNTAVLLLYKRKTLSCTQDEINKYST

  • title: Active Site
  • coordinates: N117,C122,H446,D486
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1245200360 SCRKVSFPEN0.993unspPY17X_1245200360 SCRKVSFPEN0.993unspPY17X_1245200360 SCRKVSFPEN0.993unspPY17X_1245200475 SKKNKSNNEP0.993unspPY17X_124520095 SLEDLSKEDK0.997unspPY17X_1245200320 SYEKKSEIDS0.995unsp
PY17X_1245200


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India