PY17X_1305000 | proteasome subunit alpha type-1, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1305000OTHER0.9999520.0000230.000026
No Results

  • Fasta :-

    >PY17X_1305000 MYRNLYDTDNIIYSPEGRLYQVEYANEATKQGTCAVAIKSKEFVVVCGLKKCISKLSYHQ EKLFKIDDYIGVTMSGITSDAKVLTKYMRNECLTHKFLFDENINIEKLVKKVADKYQKNT QKSSKRAFGVGLIISGYFNEPHIFETKSNGSYFEYEAISFGARSHASKTYLEKNLHLFEE SSLDDLIIHCLKALKCSLSSETELTADNTSLAIVGKDKPWEEMPYVKLIDYLTKVNSEKR TEDSQENAENIGN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1305000.fa Sequence name : PY17X_1305000 Sequence length : 253 VALUES OF COMPUTED PARAMETERS Coef20 : 3.351 CoefTot : -0.191 ChDiff : -2 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.735 1.371 0.034 0.572 MesoH : -0.993 0.101 -0.510 0.149 MuHd_075 : 25.902 13.951 5.146 6.804 MuHd_095 : 26.535 15.461 5.371 6.772 MuHd_100 : 26.539 17.309 5.804 6.751 MuHd_105 : 23.751 16.944 5.783 5.088 Hmax_075 : 4.200 4.433 -1.277 3.197 Hmax_095 : -2.400 1.600 -2.886 2.188 Hmax_100 : 8.600 8.900 0.179 3.830 Hmax_105 : 0.400 3.100 -1.493 2.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6740 0.3260 DFMC : 0.8212 0.1788
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 253 PY17X_1305000 MYRNLYDTDNIIYSPEGRLYQVEYANEATKQGTCAVAIKSKEFVVVCGLKKCISKLSYHQEKLFKIDDYIGVTMSGITSD 80 AKVLTKYMRNECLTHKFLFDENINIEKLVKKVADKYQKNTQKSSKRAFGVGLIISGYFNEPHIFETKSNGSYFEYEAISF 160 GARSHASKTYLEKNLHLFEESSLDDLIIHCLKALKCSLSSETELTADNTSLAIVGKDKPWEEMPYVKLIDYLTKVNSEKR 240 TEDSQENAENIGN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1305000 3 ----MYR|NL 0.090 . PY17X_1305000 18 IYSPEGR|LY 0.090 . PY17X_1305000 30 YANEATK|QG 0.064 . PY17X_1305000 39 TCAVAIK|SK 0.099 . PY17X_1305000 41 AVAIKSK|EF 0.061 . PY17X_1305000 50 VVVCGLK|KC 0.057 . PY17X_1305000 51 VVCGLKK|CI 0.090 . PY17X_1305000 55 LKKCISK|LS 0.069 . PY17X_1305000 62 LSYHQEK|LF 0.062 . PY17X_1305000 65 HQEKLFK|ID 0.073 . PY17X_1305000 82 GITSDAK|VL 0.062 . PY17X_1305000 86 DAKVLTK|YM 0.065 . PY17X_1305000 89 VLTKYMR|NE 0.071 . PY17X_1305000 96 NECLTHK|FL 0.070 . PY17X_1305000 107 ENINIEK|LV 0.068 . PY17X_1305000 110 NIEKLVK|KV 0.066 . PY17X_1305000 111 IEKLVKK|VA 0.153 . PY17X_1305000 115 VKKVADK|YQ 0.064 . PY17X_1305000 118 VADKYQK|NT 0.058 . PY17X_1305000 122 YQKNTQK|SS 0.085 . PY17X_1305000 125 NTQKSSK|RA 0.081 . PY17X_1305000 126 TQKSSKR|AF 0.336 . PY17X_1305000 147 PHIFETK|SN 0.088 . PY17X_1305000 163 AISFGAR|SH 0.122 . PY17X_1305000 168 ARSHASK|TY 0.080 . PY17X_1305000 173 SKTYLEK|NL 0.067 . PY17X_1305000 192 LIIHCLK|AL 0.064 . PY17X_1305000 195 HCLKALK|CS 0.057 . PY17X_1305000 216 SLAIVGK|DK 0.087 . PY17X_1305000 218 AIVGKDK|PW 0.069 . PY17X_1305000 227 EEMPYVK|LI 0.061 . PY17X_1305000 234 LIDYLTK|VN 0.065 . PY17X_1305000 239 TKVNSEK|RT 0.084 . PY17X_1305000 240 KVNSEKR|TE 0.255 . ____________________________^_________________

  • Fasta :-

    >PY17X_1305000 ATGTATAGAAATTTGTATGATACAGACAATATTATTTATTCTCCTGAAGGGAGGTTATAC CAAGTAGAATATGCAAATGAAGCAACGAAACAAGGAACCTGTGCAGTGGCTATAAAATCT AAGGAGTTTGTGGTAGTTTGTGGTTTGAAGAAATGTATTAGTAAACTTTCCTATCATCAA GAAAAGCTATTTAAAATAGATGACTATATAGGTGTAACAATGAGTGGGATAACTTCAGAT GCGAAAGTATTGACCAAATATATGAGAAATGAATGCTTAACTCATAAATTTTTATTTGAT GAAAATATTAATATAGAAAAATTAGTTAAAAAAGTAGCAGACAAATATCAAAAAAATACC CAAAAAAGTAGTAAAAGAGCTTTTGGTGTTGGATTGATAATATCTGGGTATTTTAATGAA CCACATATTTTTGAAACAAAATCAAATGGATCTTATTTTGAATATGAGGCAATATCTTTT GGTGCTCGATCTCATGCATCAAAAACTTATTTAGAAAAGAATTTACATTTATTTGAGGAA TCCTCATTAGATGATTTGATTATACACTGTTTAAAAGCTTTGAAATGCTCTCTTTCTAGT GAAACCGAACTAACTGCTGATAACACATCTCTAGCTATTGTTGGAAAGGATAAACCATGG GAAGAAATGCCATATGTCAAATTGATTGATTATTTGACAAAGGTAAATAGTGAAAAAAGG ACTGAAGATAGTCAGGAAAATGCTGAAAACATTGGAAACTAA
  • Download Fasta

  • Fasta :-

    MYRNLYDTDNIIYSPEGRLYQVEYANEATKQGTCAVAIKSKEFVVVCGLKKCISKLSYHQ EKLFKIDDYIGVTMSGITSDAKVLTKYMRNECLTHKFLFDENINIEKLVKKVADKYQKNT QKSSKRAFGVGLIISGYFNEPHIFETKSNGSYFEYEAISFGARSHASKTYLEKNLHLFEE SSLDDLIIHCLKALKCSLSSETELTADNTSLAIVGKDKPWEEMPYVKLIDYLTKVNSEKR TEDSQENAENIGN

    No Results
  • title: active site
  • coordinates: T33,L49,K51,K62,A162
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1305000237 STKVNSEKRT0.996unspPY17X_1305000237 STKVNSEKRT0.996unspPY17X_1305000237 STKVNSEKRT0.996unspPY17X_1305000244 SRTEDSQENA0.996unspPY17X_1305000123 SNTQKSSKRA0.997unspPY17X_1305000151 SKSNGSYFEY0.994unsp
PY17X_1305000


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India