PY17X_1324500 | signal peptide peptidase, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PY17X_1324500OTHER0.9999510.0000030.000046
No Results

  • Fasta :-

    >PY17X_1324500 MNLLKLIGKNKKMKNHDKRNSAIYYACYAIIVLTIILSRFVVIPLILQMTLYTFITIYIG SHESIRQLEADDKTQKTDHITTYDAIMFPIIGSAALLTLYFAYKFLDPYYVNLLLTVYLT MAGVFSLQSVFSTVLEPFFPKFFKKDEFVKTINAPKFISKDPIVFNTNKGEIMSLIVCFI IGARWIFYKDFITHNILAISFCFQALSLVILSNFVIGFILLSGLFVYDIFWVFGNDVMVT VAKSFEAPVKLLFPVSLDPLHYSMLGLGDIIIPGILISLCLRFDYYLHRNKIHKGNVKKM FNDISIHESFKKYYFYTITVFYQAGLILTYCMLFYFEHAQPALLYLVPACIIAIVGCALF KREFKIMIKYQEITDKSSNADDGKKKTLEKEETLKSQESIMSVTKRKINAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1324500.fa Sequence name : PY17X_1324500 Sequence length : 411 VALUES OF COMPUTED PARAMETERS Coef20 : 3.402 CoefTot : -1.618 ChDiff : 13 ZoneTo : 62 KR : 8 DE : 1 CleavSite : 41 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.088 2.718 0.623 0.861 MesoH : 1.014 1.562 0.074 0.607 MuHd_075 : 28.905 30.582 8.742 9.067 MuHd_095 : 18.046 14.788 4.566 4.375 MuHd_100 : 21.060 15.514 5.942 5.290 MuHd_105 : 30.770 21.617 9.554 7.594 Hmax_075 : -8.300 29.487 -3.977 8.867 Hmax_095 : 16.188 19.512 -5.603 6.895 Hmax_100 : 18.700 3.100 -4.934 1.060 Hmax_105 : -2.217 8.167 -2.261 2.987 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7801 0.2199 DFMC : 0.4827 0.5173 This protein is probably imported in mitochondria. f(Ser) = 0.0484 f(Arg) = 0.0323 CMi = 0.42017 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 411 PY17X_1324500 MNLLKLIGKNKKMKNHDKRNSAIYYACYAIIVLTIILSRFVVIPLILQMTLYTFITIYIGSHESIRQLEADDKTQKTDHI 80 TTYDAIMFPIIGSAALLTLYFAYKFLDPYYVNLLLTVYLTMAGVFSLQSVFSTVLEPFFPKFFKKDEFVKTINAPKFISK 160 DPIVFNTNKGEIMSLIVCFIIGARWIFYKDFITHNILAISFCFQALSLVILSNFVIGFILLSGLFVYDIFWVFGNDVMVT 240 VAKSFEAPVKLLFPVSLDPLHYSMLGLGDIIIPGILISLCLRFDYYLHRNKIHKGNVKKMFNDISIHESFKKYYFYTITV 320 FYQAGLILTYCMLFYFEHAQPALLYLVPACIIAIVGCALFKREFKIMIKYQEITDKSSNADDGKKKTLEKEETLKSQESI 400 MSVTKRKINAK 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ........... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1324500 5 --MNLLK|LI 0.073 . PY17X_1324500 9 LLKLIGK|NK 0.061 . PY17X_1324500 11 KLIGKNK|KM 0.060 . PY17X_1324500 12 LIGKNKK|MK 0.093 . PY17X_1324500 14 GKNKKMK|NH 0.083 . PY17X_1324500 18 KMKNHDK|RN 0.076 . PY17X_1324500 19 MKNHDKR|NS 0.263 . PY17X_1324500 39 LTIILSR|FV 0.094 . PY17X_1324500 66 GSHESIR|QL 0.126 . PY17X_1324500 73 QLEADDK|TQ 0.057 . PY17X_1324500 76 ADDKTQK|TD 0.057 . PY17X_1324500 104 TLYFAYK|FL 0.082 . PY17X_1324500 141 LEPFFPK|FF 0.070 . PY17X_1324500 144 FFPKFFK|KD 0.063 . PY17X_1324500 145 FPKFFKK|DE 0.146 . PY17X_1324500 150 KKDEFVK|TI 0.064 . PY17X_1324500 156 KTINAPK|FI 0.076 . PY17X_1324500 160 APKFISK|DP 0.070 . PY17X_1324500 169 IVFNTNK|GE 0.064 . PY17X_1324500 184 CFIIGAR|WI 0.085 . PY17X_1324500 189 ARWIFYK|DF 0.089 . PY17X_1324500 243 VMVTVAK|SF 0.090 . PY17X_1324500 250 SFEAPVK|LL 0.067 . PY17X_1324500 282 LISLCLR|FD 0.079 . PY17X_1324500 289 FDYYLHR|NK 0.087 . PY17X_1324500 291 YYLHRNK|IH 0.054 . PY17X_1324500 294 HRNKIHK|GN 0.091 . PY17X_1324500 298 IHKGNVK|KM 0.062 . PY17X_1324500 299 HKGNVKK|MF 0.134 . PY17X_1324500 311 SIHESFK|KY 0.066 . PY17X_1324500 312 IHESFKK|YY 0.116 . PY17X_1324500 361 VGCALFK|RE 0.058 . PY17X_1324500 362 GCALFKR|EF 0.186 . PY17X_1324500 365 LFKREFK|IM 0.127 . PY17X_1324500 369 EFKIMIK|YQ 0.061 . PY17X_1324500 376 YQEITDK|SS 0.078 . PY17X_1324500 384 SNADDGK|KK 0.065 . PY17X_1324500 385 NADDGKK|KT 0.094 . PY17X_1324500 386 ADDGKKK|TL 0.145 . PY17X_1324500 390 KKKTLEK|EE 0.056 . PY17X_1324500 395 EKEETLK|SQ 0.078 . PY17X_1324500 405 SIMSVTK|RK 0.061 . PY17X_1324500 406 IMSVTKR|KI 0.369 . PY17X_1324500 407 MSVTKRK|IN 0.100 . PY17X_1324500 411 KRKINAK|-- 0.081 . ____________________________^_________________

  • Fasta :-

    >PY17X_1324500 ATGAATTTACTAAAGTTAATTGGAAAGAATAAAAAAATGAAGAATCACGACAAGCGGAAT TCAGCAATATATTACGCGTGTTATGCAATTATAGTTTTAACTATAATTTTGTCGAGGTTT GTTGTGATACCCTTAATACTACAAATGACGTTATATACATTTATAACGATATATATCGGA AGTCATGAAAGCATAAGACAATTAGAAGCTGATGATAAAACCCAAAAGACTGATCATATA ACGACATATGATGCTATCATGTTTCCAATTATTGGATCAGCTGCTTTATTAACATTGTAT TTTGCTTACAAGTTTTTAGATCCCTATTATGTGAATCTATTGCTAACCGTTTATTTAACG ATGGCAGGAGTATTTTCGCTTCAAAGCGTTTTTTCCACTGTTTTGGAACCCTTTTTTCCA AAATTTTTTAAGAAAGATGAATTTGTTAAAACTATAAATGCTCCAAAGTTTATTTCAAAG GATCCAATTGTATTTAATACAAATAAAGGAGAAATTATGAGTTTGATTGTTTGTTTCATA ATTGGTGCACGATGGATATTTTACAAAGACTTTATTACACACAATATTTTAGCAATTTCC TTTTGCTTCCAAGCACTTTCATTGGTCATTTTAAGCAACTTCGTAATTGGATTCATATTA TTATCTGGATTATTTGTGTATGATATATTTTGGGTCTTTGGAAATGACGTTATGGTTACC GTTGCAAAGTCATTTGAAGCTCCTGTAAAACTATTGTTTCCAGTGTCATTAGATCCATTA CATTATAGCATGCTTGGTTTAGGAGATATAATTATTCCAGGAATTTTAATATCTTTATGC TTACGTTTTGATTATTATTTGCATAGAAATAAAATACATAAAGGAAATGTTAAGAAAATG TTTAATGATATATCTATTCATGAATCTTTCAAGAAATATTATTTTTATACAATAACAGTA TTTTATCAAGCAGGTTTAATATTAACATATTGTATGCTCTTTTATTTTGAACATGCTCAA CCAGCTTTATTATATTTAGTACCTGCTTGTATAATAGCCATAGTAGGATGCGCATTATTC AAAAGAGAATTTAAAATAATGATTAAATATCAAGAAATTACAGATAAAAGCTCAAATGCA GATGACGGAAAGAAAAAGACCCTCGAAAAAGAAGAAACACTTAAAAGCCAAGAATCAATT ATGTCAGTTACGAAAAGAAAAATTAATGCTAAATAA
  • Download Fasta

  • Fasta :-

    MNLLKLIGKNKKMKNHDKRNSAIYYACYAIIVLTIILSRFVVIPLILQMTLYTFITIYIG SHESIRQLEADDKTQKTDHITTYDAIMFPIIGSAALLTLYFAYKFLDPYYVNLLLTVYLT MAGVFSLQSVFSTVLEPFFPKFFKKDEFVKTINAPKFISKDPIVFNTNKGEIMSLIVCFI IGARWIFYKDFITHNILAISFCFQALSLVILSNFVIGFILLSGLFVYDIFWVFGNDVMVT VAKSFEAPVKLLFPVSLDPLHYSMLGLGDIIIPGILISLCLRFDYYLHRNKIHKGNVKKM FNDISIHESFKKYYFYTITVFYQAGLILTYCMLFYFEHAQPALLYLVPACIIAIVGCALF KREFKIMIKYQEITDKSSNADDGKKKTLEKEETLKSQESIMSVTKRKINAK

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PY17X_1324500


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India