PY17X_1333800 | plasmepsin VIII, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PY17X_1333800SP0.0024380.9970710.000491CS pos: 21-22. VKS-LT. Pr: 0.7401
No Results

  • Fasta :-

    >PY17X_1333800 MNKFFVFPLLLILNSIVLVKSLTENLRVSRYSKPGISTIILKGGYINRQFIGEISIGNPP QSFKVLFDTGSTNLWIPSKNCYAKACYNKKKYDYNISKNYRISSQKNPVNIFFGTGKVQI AYATDDIHLGSIKVRNQEFGIANYMSDDPFSDMQFDGLFGLGISEDIKRKGLIYDNIPRN SSRKNVFSIYYPKSVDDNGAITFGGYDKKYIEPNSNIDWFVVSSKKYWTIKMTGIKINGL FLEICSGNIEGYCDAVIDTGTSSIAGPKNDLILLTKLLNPVKSCQNKTLLKNFSFVFLDE NGVEKEYELTSNDYIVNSFKVDPILKTPCNFAFMPINISSPNGYLYILGQVFLQKYYAIF EKDNMRIGLAKSI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1333800.fa Sequence name : PY17X_1333800 Sequence length : 373 VALUES OF COMPUTED PARAMETERS Coef20 : 4.480 CoefTot : -5.745 ChDiff : 11 ZoneTo : 124 KR : 17 DE : 4 CleavSite : 103 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.524 2.306 0.173 0.756 MesoH : -0.362 0.453 -0.321 0.246 MuHd_075 : 36.457 27.801 13.264 9.634 MuHd_095 : 33.830 22.281 10.053 8.654 MuHd_100 : 30.563 19.324 8.716 6.984 MuHd_105 : 41.295 23.435 10.202 8.698 Hmax_075 : 14.700 15.750 5.035 7.887 Hmax_095 : 13.562 13.738 3.401 5.740 Hmax_100 : 14.700 16.900 -2.760 5.420 Hmax_105 : 7.400 11.200 0.712 3.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4772 0.5228 DFMC : 0.4680 0.5320 This protein is probably imported in mitochondria. f(Ser) = 0.0968 f(Arg) = 0.0323 CMi = 0.84034 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 373 PY17X_1333800 MNKFFVFPLLLILNSIVLVKSLTENLRVSRYSKPGISTIILKGGYINRQFIGEISIGNPPQSFKVLFDTGSTNLWIPSKN 80 CYAKACYNKKKYDYNISKNYRISSQKNPVNIFFGTGKVQIAYATDDIHLGSIKVRNQEFGIANYMSDDPFSDMQFDGLFG 160 LGISEDIKRKGLIYDNIPRNSSRKNVFSIYYPKSVDDNGAITFGGYDKKYIEPNSNIDWFVVSSKKYWTIKMTGIKINGL 240 FLEICSGNIEGYCDAVIDTGTSSIAGPKNDLILLTKLLNPVKSCQNKTLLKNFSFVFLDENGVEKEYELTSNDYIVNSFK 320 VDPILKTPCNFAFMPINISSPNGYLYILGQVFLQKYYAIFEKDNMRIGLAKSI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1333800 3 ----MNK|FF 0.058 . PY17X_1333800 20 NSIVLVK|SL 0.089 . PY17X_1333800 27 SLTENLR|VS 0.075 . PY17X_1333800 30 ENLRVSR|YS 0.322 . PY17X_1333800 33 RVSRYSK|PG 0.109 . PY17X_1333800 42 ISTIILK|GG 0.061 . PY17X_1333800 48 KGGYINR|QF 0.099 . PY17X_1333800 64 NPPQSFK|VL 0.071 . PY17X_1333800 79 NLWIPSK|NC 0.061 . PY17X_1333800 84 SKNCYAK|AC 0.077 . PY17X_1333800 89 AKACYNK|KK 0.066 . PY17X_1333800 90 KACYNKK|KY 0.096 . PY17X_1333800 91 ACYNKKK|YD 0.126 . PY17X_1333800 98 YDYNISK|NY 0.059 . PY17X_1333800 101 NISKNYR|IS 0.139 . PY17X_1333800 106 YRISSQK|NP 0.064 . PY17X_1333800 117 IFFGTGK|VQ 0.059 . PY17X_1333800 133 IHLGSIK|VR 0.058 . PY17X_1333800 135 LGSIKVR|NQ 0.137 . PY17X_1333800 168 GISEDIK|RK 0.068 . PY17X_1333800 169 ISEDIKR|KG 0.117 . PY17X_1333800 170 SEDIKRK|GL 0.079 . PY17X_1333800 179 IYDNIPR|NS 0.079 . PY17X_1333800 183 IPRNSSR|KN 0.094 . PY17X_1333800 184 PRNSSRK|NV 0.141 . PY17X_1333800 193 FSIYYPK|SV 0.143 . PY17X_1333800 208 TFGGYDK|KY 0.059 . PY17X_1333800 209 FGGYDKK|YI 0.116 . PY17X_1333800 225 WFVVSSK|KY 0.072 . PY17X_1333800 226 FVVSSKK|YW 0.113 . PY17X_1333800 231 KKYWTIK|MT 0.100 . PY17X_1333800 236 IKMTGIK|IN 0.066 . PY17X_1333800 268 SSIAGPK|ND 0.059 . PY17X_1333800 276 DLILLTK|LL 0.062 . PY17X_1333800 282 KLLNPVK|SC 0.068 . PY17X_1333800 287 VKSCQNK|TL 0.075 . PY17X_1333800 291 QNKTLLK|NF 0.064 . PY17X_1333800 305 DENGVEK|EY 0.062 . PY17X_1333800 320 YIVNSFK|VD 0.055 . PY17X_1333800 326 KVDPILK|TP 0.053 . PY17X_1333800 355 GQVFLQK|YY 0.072 . PY17X_1333800 362 YYAIFEK|DN 0.078 . PY17X_1333800 366 FEKDNMR|IG 0.069 . PY17X_1333800 371 MRIGLAK|SI 0.121 . ____________________________^_________________

  • Fasta :-

    >PY17X_1333800 ATGAATAAATTTTTTGTCTTTCCTTTATTGTTAATTTTAAATTCTATTGTTCTTGTAAAG TCGTTAACAGAGAATTTACGGGTATCTAGATATAGCAAACCAGGAATTTCAACAATAATA CTGAAAGGAGGTTACATTAATAGACAATTTATTGGGGAAATAAGCATTGGTAATCCTCCT CAATCATTTAAGGTTTTATTTGACACTGGTAGTACCAATTTATGGATTCCTTCAAAAAAT TGCTATGCAAAAGCTTGTTATAATAAAAAAAAGTATGACTATAATATATCTAAAAATTAT AGAATATCCTCCCAAAAAAATCCTGTGAATATTTTTTTTGGAACGGGTAAAGTTCAGATT GCTTATGCTACCGATGATATACACCTAGGAAGTATTAAAGTTAGGAATCAGGAATTTGGA ATAGCAAATTATATGTCCGACGACCCTTTTTCTGATATGCAATTTGATGGACTATTTGGA TTAGGCATTTCAGAGGATATAAAAAGAAAAGGACTAATATATGACAATATACCAAGGAAT AGTTCTAGAAAAAATGTTTTCTCCATTTACTATCCTAAAAGCGTTGATGATAATGGGGCA ATTACATTTGGTGGATATGACAAAAAATATATTGAGCCGAATTCGAATATAGATTGGTTT GTTGTTTCGTCTAAAAAGTATTGGACCATAAAAATGACAGGAATAAAAATTAATGGTTTG TTTTTGGAAATATGCTCAGGGAATATAGAAGGATATTGTGATGCTGTAATTGATACAGGA ACATCGAGTATTGCAGGACCAAAAAATGACTTAATATTATTAACTAAATTATTAAATCCT GTAAAATCATGCCAAAATAAAACACTATTAAAAAACTTTTCTTTCGTTTTTTTGGACGAA AATGGTGTAGAGAAAGAATATGAATTAACATCAAACGATTATATTGTTAATTCGTTTAAA GTTGACCCAATTTTAAAAACCCCATGCAATTTTGCATTTATGCCAATTAATATATCATCA CCTAATGGATATTTATATATTCTTGGCCAAGTATTTTTACAAAAATATTATGCAATATTT GAAAAGGACAATATGAGAATCGGCCTAGCTAAATCGATATAA
  • Download Fasta

  • Fasta :-

    MNKFFVFPLLLILNSIVLVKSLTENLRVSRYSKPGISTIILKGGYINRQFIGEISIGNPP QSFKVLFDTGSTNLWIPSKNCYAKACYNKKKYDYNISKNYRISSQKNPVNIFFGTGKVQI AYATDDIHLGSIKVRNQEFGIANYMSDDPFSDMQFDGLFGLGISEDIKRKGLIYDNIPRN SSRKNVFSIYYPKSVDDNGAITFGGYDKKYIEPNSNIDWFVVSSKKYWTIKMTGIKINGL FLEICSGNIEGYCDAVIDTGTSSIAGPKNDLILLTKLLNPVKSCQNKTLLKNFSFVFLDE NGVEKEYELTSNDYIVNSFKVDPILKTPCNFAFMPINISSPNGYLYILGQVFLQKYYAIF EKDNMRIGLAKSI

  • title: catalytic residue
  • coordinates: D68,D258
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1333800182 SPRNSSRKNV0.995unspPY17X_1333800182 SPRNSSRKNV0.995unspPY17X_1333800182 SPRNSSRKNV0.995unspPY17X_1333800194 SYYPKSVDDN0.991unspPY17X_133380029 SNLRVSRYSK0.991unspPY17X_1333800104 SYRISSQKNP0.994unsp
PY17X_1333800


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India