PY17X_1456600 | ATP-dependent zinc metalloprotease FTSH 1, putative

_IDPredictionOTHERSPmTPCS_Position
PY17X_1456600OTHER0.9989020.0000110.001088
No Results

  • Fasta :-

    >PY17X_1456600 MYNYYKNFTSKIMNSNQYANDNYASSESDKHGEEDESALLSNGDRKYMNKSKSNQYDIDN GYYGYYDKIFGKRRNKKWNYFVIFFLGVCLGFAIWPFFMTIITYKLVYKDNYNNHNFPTS DNSNSLKPYVNDKNRKNDNPNNRTPPSEQGQKKPSPHFKPVKFDEIAGIDESKLELLEVV DFIKNRERYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQ GAKRIRQLFSHARSVAPSIVFIDEIDAIGGKRSPSASNGAGQKEHDQTLNQLLVEMDGFS NTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDVSGRKKILEIYIKKIKSNLNAND IERMSRLTPGFSGADLENLVNEATILATRNKKSLVTINELFEARDKVSMGPERKSLKQSE HQRRITAYHEAGHAIVAYFLHPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEA KLAVCMGGRTAEEIVFGKSETSSGASSDISRATDIAYKMVTEWGMSDKLGPLNYKKRMGD GYSSMRLSAQTISAIETEVKTLVEKGKSISEEILRRHRKELDNLAFALLDKETLTGEEIK KIVDPNNSRDQSNRYQLLNKDPKNDDTQNDNNNSGKKPVRSDGKTNTSKNEKNEPNSHEN EYNDSKEIDTNDKDNSNNMKSDEVNDLNKMENFVENEYIDTKDITTLSSENEIGILSKHF KNENKKLKKKYSRDPNTKNNNVLKMINSHKPSYYSKNENIDSENSINNSLDDFSDNIRNT RDSENNYDNNNTVKNTSELFTNDFSEENNNDNLSSVKTKDINYNNFQEIVDISPIKNVSE MKKFNIYEHNLNKLFLFDIFNN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1456600.fa Sequence name : PY17X_1456600 Sequence length : 862 VALUES OF COMPUTED PARAMETERS Coef20 : 3.548 CoefTot : -1.314 ChDiff : -1 ZoneTo : 20 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.565 2.353 0.461 0.941 MesoH : -0.558 0.294 -0.342 0.207 MuHd_075 : 26.729 12.659 7.399 5.768 MuHd_095 : 27.582 19.176 8.003 6.081 MuHd_100 : 26.721 19.188 8.498 6.267 MuHd_105 : 25.374 19.989 9.362 6.216 Hmax_075 : 3.700 -0.300 -2.013 2.150 Hmax_095 : 7.525 3.763 -1.026 3.124 Hmax_100 : 6.500 2.900 -0.911 2.930 Hmax_105 : 11.083 7.350 1.256 4.153 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8323 0.1677 DFMC : 0.8739 0.1261
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 862 PY17X_1456600 MYNYYKNFTSKIMNSNQYANDNYASSESDKHGEEDESALLSNGDRKYMNKSKSNQYDIDNGYYGYYDKIFGKRRNKKWNY 80 FVIFFLGVCLGFAIWPFFMTIITYKLVYKDNYNNHNFPTSDNSNSLKPYVNDKNRKNDNPNNRTPPSEQGQKKPSPHFKP 160 VKFDEIAGIDESKLELLEVVDFIKNRERYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQ 240 GAKRIRQLFSHARSVAPSIVFIDEIDAIGGKRSPSASNGAGQKEHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSA 320 LLRPGRFDRIVYVPLPDVSGRKKILEIYIKKIKSNLNANDIERMSRLTPGFSGADLENLVNEATILATRNKKSLVTINEL 400 FEARDKVSMGPERKSLKQSEHQRRITAYHEAGHAIVAYFLHPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEA 480 KLAVCMGGRTAEEIVFGKSETSSGASSDISRATDIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSMRLSAQTISAIETEVK 560 TLVEKGKSISEEILRRHRKELDNLAFALLDKETLTGEEIKKIVDPNNSRDQSNRYQLLNKDPKNDDTQNDNNNSGKKPVR 640 SDGKTNTSKNEKNEPNSHENEYNDSKEIDTNDKDNSNNMKSDEVNDLNKMENFVENEYIDTKDITTLSSENEIGILSKHF 720 KNENKKLKKKYSRDPNTKNNNVLKMINSHKPSYYSKNENIDSENSINNSLDDFSDNIRNTRDSENNYDNNNTVKNTSELF 800 TNDFSEENNNDNLSSVKTKDINYNNFQEIVDISPIKNVSEMKKFNIYEHNLNKLFLFDIFNN 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .............................................................. 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PY17X_1456600 6 -MYNYYK|NF 0.063 . PY17X_1456600 11 YKNFTSK|IM 0.068 . PY17X_1456600 30 ASSESDK|HG 0.083 . PY17X_1456600 45 LLSNGDR|KY 0.086 . PY17X_1456600 46 LSNGDRK|YM 0.105 . PY17X_1456600 50 DRKYMNK|SK 0.098 . PY17X_1456600 52 KYMNKSK|SN 0.084 . PY17X_1456600 68 YYGYYDK|IF 0.063 . PY17X_1456600 72 YDKIFGK|RR 0.060 . PY17X_1456600 73 DKIFGKR|RN 0.122 . PY17X_1456600 74 KIFGKRR|NK 0.132 . PY17X_1456600 76 FGKRRNK|KW 0.098 . PY17X_1456600 77 GKRRNKK|WN 0.400 . PY17X_1456600 105 MTIITYK|LV 0.071 . PY17X_1456600 109 TYKLVYK|DN 0.071 . PY17X_1456600 127 DNSNSLK|PY 0.066 . PY17X_1456600 133 KPYVNDK|NR 0.059 . PY17X_1456600 135 YVNDKNR|KN 0.088 . PY17X_1456600 136 VNDKNRK|ND 0.086 . PY17X_1456600 143 NDNPNNR|TP 0.092 . PY17X_1456600 152 PSEQGQK|KP 0.061 . PY17X_1456600 153 SEQGQKK|PS 0.108 . PY17X_1456600 159 KPSPHFK|PV 0.131 . PY17X_1456600 162 PHFKPVK|FD 0.083 . PY17X_1456600 173 AGIDESK|LE 0.056 . PY17X_1456600 184 EVVDFIK|NR 0.065 . PY17X_1456600 186 VDFIKNR|ER 0.093 . PY17X_1456600 188 FIKNRER|YQ 0.110 . PY17X_1456600 195 YQEMGAR|MP 0.090 . PY17X_1456600 198 MGARMPK|GV 0.226 . PY17X_1456600 210 GPPGSGK|TM 0.056 . PY17X_1456600 215 GKTMLAR|AV 0.144 . PY17X_1456600 243 YVGQGAK|RI 0.065 . PY17X_1456600 244 VGQGAKR|IR 0.105 . PY17X_1456600 246 QGAKRIR|QL 0.109 . PY17X_1456600 253 QLFSHAR|SV 0.247 . PY17X_1456600 271 IDAIGGK|RS 0.056 . PY17X_1456600 272 DAIGGKR|SP 0.248 . PY17X_1456600 283 SNGAGQK|EH 0.071 . PY17X_1456600 313 VIGATNR|ID 0.065 . PY17X_1456600 323 LDSALLR|PG 0.076 . PY17X_1456600 326 ALLRPGR|FD 0.201 . PY17X_1456600 329 RPGRFDR|IV 0.496 . PY17X_1456600 341 LPDVSGR|KK 0.090 . PY17X_1456600 342 PDVSGRK|KI 0.067 . PY17X_1456600 343 DVSGRKK|IL 0.131 . PY17X_1456600 350 ILEIYIK|KI 0.062 . PY17X_1456600 351 LEIYIKK|IK 0.081 . PY17X_1456600 353 IYIKKIK|SN 0.075 . PY17X_1456600 363 NANDIER|MS 0.081 . PY17X_1456600 366 DIERMSR|LT 0.134 . PY17X_1456600 389 ATILATR|NK 0.063 . PY17X_1456600 391 ILATRNK|KS 0.061 . PY17X_1456600 392 LATRNKK|SL 0.407 . PY17X_1456600 404 NELFEAR|DK 0.092 . PY17X_1456600 406 LFEARDK|VS 0.057 . PY17X_1456600 413 VSMGPER|KS 0.083 . PY17X_1456600 414 SMGPERK|SL 0.233 . PY17X_1456600 417 PERKSLK|QS 0.080 . PY17X_1456600 423 KQSEHQR|RI 0.126 . PY17X_1456600 424 QSEHQRR|IT 0.204 . PY17X_1456600 443 AYFLHPK|TD 0.060 . PY17X_1456600 449 KTDPIHK|AT 0.068 . PY17X_1456600 455 KATIISR|GN 0.083 . PY17X_1456600 470 QIPVDDR|HN 0.077 . PY17X_1456600 475 DRHNYFK|SQ 0.101 . PY17X_1456600 481 KSQMEAK|LA 0.077 . PY17X_1456600 489 AVCMGGR|TA 0.105 . PY17X_1456600 498 EEIVFGK|SE 0.082 . PY17X_1456600 511 ASSDISR|AT 0.168 . PY17X_1456600 518 ATDIAYK|MV 0.073 . PY17X_1456600 528 EWGMSDK|LG 0.056 . PY17X_1456600 535 LGPLNYK|KR 0.056 . PY17X_1456600 536 GPLNYKK|RM 0.126 . PY17X_1456600 537 PLNYKKR|MG 0.253 . PY17X_1456600 546 DGYSSMR|LS 0.079 . PY17X_1456600 560 AIETEVK|TL 0.062 . PY17X_1456600 565 VKTLVEK|GK 0.071 . PY17X_1456600 567 TLVEKGK|SI 0.133 . PY17X_1456600 575 ISEEILR|RH 0.081 . PY17X_1456600 576 SEEILRR|HR 0.094 . PY17X_1456600 578 EILRRHR|KE 0.128 . PY17X_1456600 579 ILRRHRK|EL 0.351 . PY17X_1456600 591 AFALLDK|ET 0.065 . PY17X_1456600 600 LTGEEIK|KI 0.062 . PY17X_1456600 601 TGEEIKK|IV 0.132 . PY17X_1456600 609 VDPNNSR|DQ 0.076 . PY17X_1456600 614 SRDQSNR|YQ 0.087 . PY17X_1456600 620 RYQLLNK|DP 0.062 . PY17X_1456600 623 LLNKDPK|ND 0.077 . PY17X_1456600 636 DNNNSGK|KP 0.066 . PY17X_1456600 637 NNNSGKK|PV 0.151 . PY17X_1456600 640 SGKKPVR|SD 0.186 . PY17X_1456600 644 PVRSDGK|TN 0.059 . PY17X_1456600 649 GKTNTSK|NE 0.060 . PY17X_1456600 652 NTSKNEK|NE 0.060 . PY17X_1456600 666 NEYNDSK|EI 0.068 . PY17X_1456600 673 EIDTNDK|DN 0.067 . PY17X_1456600 680 DNSNNMK|SD 0.096 . PY17X_1456600 689 EVNDLNK|ME 0.065 . PY17X_1456600 702 NEYIDTK|DI 0.066 . PY17X_1456600 718 EIGILSK|HF 0.063 . PY17X_1456600 721 ILSKHFK|NE 0.088 . PY17X_1456600 725 HFKNENK|KL 0.062 . PY17X_1456600 726 FKNENKK|LK 0.093 . PY17X_1456600 728 NENKKLK|KK 0.068 . PY17X_1456600 729 ENKKLKK|KY 0.107 . PY17X_1456600 730 NKKLKKK|YS 0.109 . PY17X_1456600 733 LKKKYSR|DP 0.119 . PY17X_1456600 738 SRDPNTK|NN 0.065 . PY17X_1456600 744 KNNNVLK|MI 0.089 . PY17X_1456600 750 KMINSHK|PS 0.066 . PY17X_1456600 756 KPSYYSK|NE 0.065 . PY17X_1456600 778 DFSDNIR|NT 0.110 . PY17X_1456600 781 DNIRNTR|DS 0.312 . PY17X_1456600 794 DNNNTVK|NT 0.077 . PY17X_1456600 817 DNLSSVK|TK 0.062 . PY17X_1456600 819 LSSVKTK|DI 0.132 . PY17X_1456600 836 VDISPIK|NV 0.076 . PY17X_1456600 842 KNVSEMK|KF 0.074 . PY17X_1456600 843 NVSEMKK|FN 0.123 . PY17X_1456600 853 YEHNLNK|LF 0.055 . ____________________________^_________________

  • Fasta :-

    >PY17X_1456600 ATGTATAATTATTACAAAAATTTTACAAGTAAAATTATGAATTCTAATCAATATGCAAAT GATAATTATGCATCTTCCGAATCAGACAAACATGGTGAAGAAGATGAGTCTGCATTACTT TCAAATGGAGATAGAAAATATATGAATAAGAGCAAGAGTAACCAATATGATATTGATAAT GGGTATTATGGATATTATGATAAAATTTTTGGTAAACGAAGAAACAAAAAATGGAATTAT TTTGTCATATTTTTTCTAGGCGTATGTCTAGGATTTGCTATATGGCCATTTTTTATGACA ATCATTACATATAAATTAGTTTATAAAGATAATTATAATAATCATAATTTTCCAACAAGT GATAATTCAAATTCTTTAAAACCTTATGTAAATGACAAAAATAGAAAAAATGATAATCCT AATAATAGAACGCCTCCAAGTGAGCAAGGTCAAAAAAAGCCATCTCCACATTTTAAGCCT GTAAAATTTGATGAAATTGCTGGAATAGATGAATCAAAATTAGAACTTTTAGAAGTTGTT GATTTTATAAAAAATAGAGAACGTTATCAAGAAATGGGTGCACGAATGCCTAAAGGTGTG TTATTAGTTGGACCCCCAGGATCTGGTAAAACTATGCTAGCTCGGGCAGTAGCTACAGAA GCTAATGTTCCATATATATATACATCTGGGCCTGAATTTATAGAAATATATGTAGGTCAA GGAGCAAAAAGAATCAGGCAATTATTTTCACATGCTAGATCAGTTGCACCATCAATTGTT TTTATTGATGAAATTGATGCAATAGGAGGGAAACGAAGTCCTAGTGCATCTAATGGTGCA GGGCAAAAAGAACATGATCAAACATTAAATCAATTATTAGTTGAAATGGATGGATTTAGT AATACTGTGCATATTATGGTTATAGGGGCAACGAATAGAATTGATACTTTAGATAGTGCT TTACTTAGACCTGGCAGATTTGATAGAATTGTATATGTTCCATTACCAGATGTAAGCGGC AGGAAAAAAATACTAGAAATTTACATAAAAAAAATTAAAAGTAATTTAAATGCGAATGAT ATTGAAAGAATGTCAAGATTGACACCTGGTTTTTCGGGCGCCGATTTAGAAAATCTTGTA AATGAAGCAACTATATTAGCTACGAGAAATAAAAAAAGTTTAGTTACTATAAACGAATTA TTTGAAGCAAGAGATAAAGTTTCGATGGGGCCTGAAAGAAAATCGTTAAAACAATCAGAA CATCAAAGGAGAATAACTGCTTATCATGAAGCTGGACATGCAATAGTTGCATATTTTCTT CACCCCAAAACAGATCCTATACATAAAGCTACTATTATTTCTAGAGGTAATGCTTTAGGG TATGTAGAGCAAATACCTGTTGATGATAGGCATAATTATTTTAAAAGTCAAATGGAAGCA AAATTAGCAGTATGTATGGGGGGAAGAACAGCAGAAGAAATCGTTTTCGGAAAATCTGAA ACAAGTAGTGGAGCATCTAGTGACATTTCAAGAGCTACTGATATAGCTTATAAAATGGTA ACCGAATGGGGAATGTCAGATAAATTAGGCCCATTAAATTATAAAAAAAGAATGGGTGAT GGTTATTCTTCTATGAGATTATCAGCTCAAACTATATCAGCTATAGAGACGGAAGTTAAA ACTTTAGTAGAAAAGGGAAAAAGCATATCAGAAGAAATTTTAAGAAGACATAGAAAAGAA TTAGATAATTTAGCTTTTGCATTATTAGATAAAGAAACATTAACTGGAGAAGAAATTAAA AAAATAGTTGATCCTAATAATTCAAGGGATCAATCAAATAGATATCAACTCTTAAATAAA GATCCTAAGAATGATGATACACAAAATGATAACAATAATAGTGGAAAGAAACCTGTACGA AGCGATGGGAAAACAAACACATCAAAAAACGAAAAAAATGAACCAAATTCTCATGAAAAT GAATATAACGATTCTAAAGAAATAGATACCAATGACAAAGATAACAGCAATAATATGAAA TCTGATGAAGTTAATGATCTTAATAAAATGGAGAATTTTGTCGAAAATGAATACATTGAT ACTAAAGATATAACGACACTTTCGTCTGAAAACGAAATTGGAATTTTAAGTAAACATTTT AAAAATGAAAACAAAAAACTTAAGAAAAAATATTCGAGGGATCCAAACACCAAGAATAAC AATGTACTAAAAATGATAAATAGTCACAAACCATCATACTATTCTAAAAATGAAAACATT GATTCAGAAAATAGTATTAATAACTCATTGGATGATTTTTCTGACAATATTAGAAATACT AGAGACAGTGAAAACAACTATGATAATAATAACACTGTAAAAAATACTAGTGAACTTTTT ACAAACGATTTTTCTGAAGAAAATAATAATGATAATTTAAGTTCTGTAAAAACAAAAGAT ATAAATTACAATAATTTTCAGGAAATAGTAGATATATCACCTATTAAAAATGTTTCTGAA ATGAAAAAGTTCAATATTTATGAGCATAATTTGAATAAATTATTTTTATTTGACATTTTT AATAATTAA
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  • Fasta :-

    MYNYYKNFTSKIMNSNQYANDNYASSESDKHGEEDESALLSNGDRKYMNKSKSNQYDIDN GYYGYYDKIFGKRRNKKWNYFVIFFLGVCLGFAIWPFFMTIITYKLVYKDNYNNHNFPTS DNSNSLKPYVNDKNRKNDNPNNRTPPSEQGQKKPSPHFKPVKFDEIAGIDESKLELLEVV DFIKNRERYQEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQ GAKRIRQLFSHARSVAPSIVFIDEIDAIGGKRSPSASNGAGQKEHDQTLNQLLVEMDGFS NTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDVSGRKKILEIYIKKIKSNLNAND IERMSRLTPGFSGADLENLVNEATILATRNKKSLVTINELFEARDKVSMGPERKSLKQSE HQRRITAYHEAGHAIVAYFLHPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEA KLAVCMGGRTAEEIVFGKSETSSGASSDISRATDIAYKMVTEWGMSDKLGPLNYKKRMGD GYSSMRLSAQTISAIETEVKTLVEKGKSISEEILRRHRKELDNLAFALLDKETLTGEEIK KIVDPNNSRDQSNRYQLLNKDPKNDDTQNDNNNSGKKPVRSDGKTNTSKNEKNEPNSHEN EYNDSKEIDTNDKDNSNNMKSDEVNDLNKMENFVENEYIDTKDITTLSSENEIGILSKHF KNENKKLKKKYSRDPNTKNNNVLKMINSHKPSYYSKNENIDSENSINNSLDDFSDNIRNT RDSENNYDNNNTVKNTSELFTNDFSEENNNDNLSSVKTKDINYNNFQEIVDISPIKNVSE MKKFNIYEHNLNKLFLFDIFNN

  • title: ATP binding site
  • coordinates: P205,P206,G207,S208,G209,K210,T211,M212,D263,N312
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1456600275 SKRSPSASNG0.995unspPY17X_1456600275 SKRSPSASNG0.995unspPY17X_1456600275 SKRSPSASNG0.995unspPY17X_1456600415 SPERKSLKQS0.997unspPY17X_1456600568 SEKGKSISEE0.99unspPY17X_1456600657 SNEPNSHENE0.996unspPY17X_1456600783 SNTRDSENNY0.997unspPY17X_145660028 SASSESDKHG0.992unspPY17X_1456600155 SQKKPSPHFK0.99unsp
PY17X_1456600


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India