_IDPredictionOTHERSPmTPCS_Position
PY17X_1463300SP0.0004650.9995310.000004CS pos: 19-20. AKG-DL. Pr: 0.9220
No Results
  • Fasta :-

    >PY17X_1463300 MKYVLFYFLIVFLIGLAKGDLPIHALMNDVVGIWEIKESEKISDTSEHCGGSVPNKNAEN LRPELNNYEKYLQTNYGELKNLKINLTFEKIKLFNDSSSRGIWTYLAVRSVDDNNSIIGN WTMVYDEGFEIRLRGKRYFGFFKYDKKVSEECPSIVENINKINTECYKTDPTKIRLGWIF YERKQKNDKEKIYQWGCFYAEKITKMPISSFVIHNMNNSNKEDNNFVNNKEHTDTDTNFL GLMQKDNYNKIRMNHPGLFGSTKISYIDRHGGKERRIYGCKKRESKKMEMNLVLPKEFSW GDPYNNKNFDEIVEDQKECGSCYLISSVYVLEKRFEILLSKKYKKNIKMNKLFYECIINL SQYNQGCDGGFPFLVGKEIYENGIHATMNYGSLDNKISSKIEKFSRNKKNKEIYYASDYN YISGCYECSSEYDMMREILNNGPIVAAIYATSSLLKIYKLNDYNFIYTTISDENKICDVP NKEFNGWQQTNHAVVIVGWGEYINKNNKLIKYWLIRNTWGNHWGYKGYLKYQRGINLNGI ESQAVYIDPDFTRGSGKDLLV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PY17X_1463300.fa Sequence name : PY17X_1463300 Sequence length : 561 VALUES OF COMPUTED PARAMETERS Coef20 : 3.949 CoefTot : -0.411 ChDiff : 10 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.735 2.224 0.234 0.809 MesoH : -1.021 -0.018 -0.486 0.164 MuHd_075 : 14.022 12.326 5.243 2.985 MuHd_095 : 21.717 14.932 5.148 3.784 MuHd_100 : 11.313 7.894 1.696 1.649 MuHd_105 : 6.756 4.582 2.780 1.712 Hmax_075 : 19.950 23.800 4.229 7.443 Hmax_095 : 21.800 23.538 3.678 7.472 Hmax_100 : 20.200 19.300 3.239 6.820 Hmax_105 : 16.100 19.200 3.148 6.780 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9590 0.0410 DFMC : 0.9782 0.0218
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 561 PY17X_1463300 MKYVLFYFLIVFLIGLAKGDLPIHALMNDVVGIWEIKESEKISDTSEHCGGSVPNKNAENLRPELNNYEKYLQTNYGELK 80 NLKINLTFEKIKLFNDSSSRGIWTYLAVRSVDDNNSIIGNWTMVYDEGFEIRLRGKRYFGFFKYDKKVSEECPSIVENIN 160 KINTECYKTDPTKIRLGWIFYERKQKNDKEKIYQWGCFYAEKITKMPISSFVIHNMNNSNKEDNNFVNNKEHTDTDTNFL 240 GLMQKDNYNKIRMNHPGLFGSTKISYIDRHGGKERRIYGCKKRESKKMEMNLVLPKEFSWGDPYNNKNFDEIVEDQKECG 320 SCYLISSVYVLEKRFEILLSKKYKKNIKMNKLFYECIINLSQYNQGCDGGFPFLVGKEIYENGIHATMNYGSLDNKISSK 400 IEKFSRNKKNKEIYYASDYNYISGCYECSSEYDMMREILNNGPIVAAIYATSSLLKIYKLNDYNFIYTTISDENKICDVP 480 NKEFNGWQQTNHAVVIVGWGEYINKNNKLIKYWLIRNTWGNHWGYKGYLKYQRGINLNGIESQAVYIDPDFTRGSGKDLL 560 V 640 ................................................................................ 80 ........................................................P....................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 . 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PY17X_1463300 2 -----MK|YV 0.079 . PY17X_1463300 18 FLIGLAK|GD 0.061 . PY17X_1463300 37 VGIWEIK|ES 0.065 . PY17X_1463300 41 EIKESEK|IS 0.078 . PY17X_1463300 56 GGSVPNK|NA 0.096 . PY17X_1463300 62 KNAENLR|PE 0.071 . PY17X_1463300 70 ELNNYEK|YL 0.072 . PY17X_1463300 80 TNYGELK|NL 0.067 . PY17X_1463300 83 GELKNLK|IN 0.058 . PY17X_1463300 90 INLTFEK|IK 0.056 . PY17X_1463300 92 LTFEKIK|LF 0.063 . PY17X_1463300 100 FNDSSSR|GI 0.098 . PY17X_1463300 109 WTYLAVR|SV 0.164 . PY17X_1463300 132 DEGFEIR|LR 0.097 . PY17X_1463300 134 GFEIRLR|GK 0.076 . PY17X_1463300 136 EIRLRGK|RY 0.061 . PY17X_1463300 137 IRLRGKR|YF 0.535 *ProP* PY17X_1463300 143 RYFGFFK|YD 0.064 . PY17X_1463300 146 GFFKYDK|KV 0.079 . PY17X_1463300 147 FFKYDKK|VS 0.084 . PY17X_1463300 161 IVENINK|IN 0.065 . PY17X_1463300 168 INTECYK|TD 0.060 . PY17X_1463300 173 YKTDPTK|IR 0.060 . PY17X_1463300 175 TDPTKIR|LG 0.085 . PY17X_1463300 183 GWIFYER|KQ 0.067 . PY17X_1463300 184 WIFYERK|QK 0.089 . PY17X_1463300 186 FYERKQK|ND 0.126 . PY17X_1463300 189 RKQKNDK|EK 0.069 . PY17X_1463300 191 QKNDKEK|IY 0.086 . PY17X_1463300 202 GCFYAEK|IT 0.064 . PY17X_1463300 205 YAEKITK|MP 0.062 . PY17X_1463300 221 NMNNSNK|ED 0.067 . PY17X_1463300 230 NNFVNNK|EH 0.065 . PY17X_1463300 245 FLGLMQK|DN 0.072 . PY17X_1463300 250 QKDNYNK|IR 0.058 . PY17X_1463300 252 DNYNKIR|MN 0.186 . PY17X_1463300 263 GLFGSTK|IS 0.071 . PY17X_1463300 269 KISYIDR|HG 0.142 . PY17X_1463300 273 IDRHGGK|ER 0.061 . PY17X_1463300 275 RHGGKER|RI 0.100 . PY17X_1463300 276 HGGKERR|IY 0.182 . PY17X_1463300 281 RRIYGCK|KR 0.067 . PY17X_1463300 282 RIYGCKK|RE 0.111 . PY17X_1463300 283 IYGCKKR|ES 0.283 . PY17X_1463300 286 CKKRESK|KM 0.130 . PY17X_1463300 287 KKRESKK|ME 0.096 . PY17X_1463300 296 MNLVLPK|EF 0.069 . PY17X_1463300 307 GDPYNNK|NF 0.065 . PY17X_1463300 317 EIVEDQK|EC 0.060 . PY17X_1463300 333 SVYVLEK|RF 0.065 . PY17X_1463300 334 VYVLEKR|FE 0.093 . PY17X_1463300 341 FEILLSK|KY 0.058 . PY17X_1463300 342 EILLSKK|YK 0.085 . PY17X_1463300 344 LLSKKYK|KN 0.091 . PY17X_1463300 345 LSKKYKK|NI 0.099 . PY17X_1463300 348 KYKKNIK|MN 0.058 . PY17X_1463300 351 KNIKMNK|LF 0.065 . PY17X_1463300 377 FPFLVGK|EI 0.070 . PY17X_1463300 396 YGSLDNK|IS 0.087 . PY17X_1463300 400 DNKISSK|IE 0.058 . PY17X_1463300 403 ISSKIEK|FS 0.081 . PY17X_1463300 406 KIEKFSR|NK 0.091 . PY17X_1463300 408 EKFSRNK|KN 0.058 . PY17X_1463300 409 KFSRNKK|NK 0.386 . PY17X_1463300 411 SRNKKNK|EI 0.096 . PY17X_1463300 436 SEYDMMR|EI 0.100 . PY17X_1463300 456 ATSSLLK|IY 0.059 . PY17X_1463300 459 SLLKIYK|LN 0.061 . PY17X_1463300 475 TISDENK|IC 0.070 . PY17X_1463300 482 ICDVPNK|EF 0.070 . PY17X_1463300 505 WGEYINK|NN 0.058 . PY17X_1463300 508 YINKNNK|LI 0.059 . PY17X_1463300 511 KNNKLIK|YW 0.078 . PY17X_1463300 516 IKYWLIR|NT 0.097 . PY17X_1463300 526 GNHWGYK|GY 0.084 . PY17X_1463300 530 GYKGYLK|YQ 0.062 . PY17X_1463300 533 GYLKYQR|GI 0.085 . PY17X_1463300 553 IDPDFTR|GS 0.118 . PY17X_1463300 557 FTRGSGK|DL 0.079 . ____________________________^_________________
  • Fasta :-

    >PY17X_1463300 ATGAAATATGTTTTATTTTATTTCCTCATTGTATTTTTGATTGGGCTTGCAAAAGGGGAT CTGCCTATTCATGCTCTTATGAATGATGTTGTAGGAATTTGGGAAATAAAAGAGAGCGAA AAAATTAGCGATACTTCGGAACATTGTGGGGGTAGTGTTCCCAATAAAAATGCGGAAAAC TTAAGACCTGAGTTAAATAATTACGAAAAATATTTGCAAACAAATTATGGTGAATTAAAA AATTTAAAAATTAACTTAACTTTTGAAAAAATTAAGTTATTTAACGATTCCAGTTCTCGC GGTATTTGGACTTATCTTGCCGTTAGATCAGTGGATGATAATAATTCGATTATAGGAAAC TGGACAATGGTCTATGATGAAGGATTTGAAATTCGATTGAGGGGGAAGAGATACTTTGGA TTTTTTAAGTATGACAAAAAAGTTAGTGAGGAATGTCCAAGTATTGTAGAAAATATAAAC AAAATAAATACAGAGTGCTATAAAACAGATCCAACAAAAATAAGATTAGGATGGATATTT TATGAAAGAAAACAAAAAAATGATAAAGAAAAAATATATCAATGGGGTTGTTTCTATGCT GAAAAAATTACAAAGATGCCTATCTCTTCCTTTGTTATACATAATATGAATAATTCCAAT AAAGAAGATAATAATTTTGTCAATAATAAAGAGCATACAGACACTGATACGAACTTTCTT GGGTTGATGCAAAAAGATAATTACAATAAAATCCGAATGAATCATCCAGGACTATTTGGA TCGACAAAGATAAGCTACATTGACAGACACGGAGGAAAGGAAAGGCGAATATATGGATGC AAAAAAAGAGAATCGAAAAAAATGGAAATGAATTTAGTTTTACCAAAAGAATTCAGTTGG GGTGATCCATATAATAATAAAAATTTTGATGAAATAGTAGAAGATCAAAAAGAATGTGGA AGTTGTTATTTAATATCTAGTGTATATGTATTAGAAAAAAGATTTGAAATATTATTATCA AAAAAATACAAAAAAAATATTAAAATGAATAAATTATTTTATGAATGTATTATAAATTTA TCACAATATAATCAAGGATGTGATGGAGGTTTTCCATTTCTTGTTGGAAAAGAAATTTAT GAAAATGGTATTCATGCAACTATGAACTATGGATCTTTAGATAATAAAATTTCATCTAAA ATAGAAAAATTTTCTAGAAATAAAAAAAATAAGGAAATATATTATGCATCTGATTATAAT TATATAAGTGGATGTTATGAATGTTCAAGTGAATATGATATGATGAGGGAAATATTAAAT AATGGACCTATTGTAGCTGCAATTTATGCAACTTCATCATTATTAAAAATATACAAATTA AATGATTATAATTTTATATATACAACTATTTCAGATGAAAATAAAATATGTGATGTTCCA AATAAAGAGTTTAATGGATGGCAACAAACAAATCATGCTGTTGTTATAGTTGGATGGGGT GAATATATTAATAAAAATAATAAACTAATAAAATATTGGCTAATTAGAAATACATGGGGA AATCATTGGGGATATAAAGGATACTTAAAATATCAAAGAGGAATAAATTTAAATGGTATA GAATCTCAAGCAGTATATATTGATCCTGATTTTACCAGAGGAAGTGGCAAAGATTTACTT GTTTAA
  • Download Fasta
  • Fasta :-

    MKYVLFYFLIVFLIGLAKGDLPIHALMNDVVGIWEIKESEKISDTSEHCGGSVPNKNAEN LRPELNNYEKYLQTNYGELKNLKINLTFEKIKLFNDSSSRGIWTYLAVRSVDDNNSIIGN WTMVYDEGFEIRLRGKRYFGFFKYDKKVSEECPSIVENINKINTECYKTDPTKIRLGWIF YERKQKNDKEKIYQWGCFYAEKITKMPISSFVIHNMNNSNKEDNNFVNNKEHTDTDTNFL GLMQKDNYNKIRMNHPGLFGSTKISYIDRHGGKERRIYGCKKRESKKMEMNLVLPKEFSW GDPYNNKNFDEIVEDQKECGSCYLISSVYVLEKRFEILLSKKYKKNIKMNKLFYECIINL SQYNQGCDGGFPFLVGKEIYENGIHATMNYGSLDNKISSKIEKFSRNKKNKEIYYASDYN YISGCYECSSEYDMMREILNNGPIVAAIYATSSLLKIYKLNDYNFIYTTISDENKICDVP NKEFNGWQQTNHAVVIVGWGEYINKNNKLIKYWLIRNTWGNHWGYKGYLKYQRGINLNGI ESQAVYIDPDFTRGSGKDLLV

  • title: active site
  • coordinates: Q316,C322,H492,N517
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PY17X_1463300555 SFTRGSGKDL0.997unspPY17X_1463300555 SFTRGSGKDL0.997unspPY17X_1463300555 SFTRGSGKDL0.997unspPY17X_1463300149 SDKKVSEECP0.992unspPY17X_1463300285 SKKRESKKME0.997unsp
PY17X_1463300


Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India