PcyM_0111000 | lysophospholipase, putative

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
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Curated_GO_Component_IDs:
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Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PcyM_0111000	OTHER	0.999995	0.000003	0.000002

No Results

Fasta :-
>PcyM_0111000 MAEVTNKPAGRGPQNRPGNRPTNRGGNKAANRGPNQSANQPANKTPNRAPNGVPRVTQNE TARVTQSEAARVTQSETAKESEKKAMNNAANQAENKTSNEIEKKTSAEPEKKAAAEPEKK AAAEPEKKASAEPEKKAAAEPEKKTQTEPEKKTPIEPEKKIPDETEKATSGSANKETRQT EKETPHKVADKVAKESPNRDANKAANRDANKAANRDADKAANRDANKAANRDANKAANKA ADGDNDGRQNDILKTGSFISRDGLELKTYEWVVNKPVGIIILVHALNSHVRFEYLKHNVI IESKEKAILVDAKNYYIYKGSWIEQFNKRGYSVYGLDMRGHGQSGCVQNVKTHVNDFQEL VYDVLEYANIVYDSLCSGGKKKKKEKKTAYGGVINTSSDMASSAASTSDDDNTSPGSHIS PGSASSSKEQLPSGMNNIKKNDIPPFYFMGLSMGGNIVLRVLELREKKGDESIKRLNIKG VISLAGMISLDDLKKKPEYKYFYLPIAKLASTLLPTMRLSPVLKFEMFPYINDLFSFDAN CYHKPITNRFGNEILKAVDALHNDIRFIPEDVQILIVHSVLDSACSYTGVSKFFNSIQTK NKELFTIDDMDHILPQEPGNEKILKKVIDWLAQLQ
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0111000.fa Sequence name : PcyM_0111000 Sequence length : 635 VALUES OF COMPUTED PARAMETERS Coef20 : 3.163 CoefTot : -4.783 ChDiff : 14 ZoneTo : 59 KR : 10 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.547 1.341 0.133 0.633 MesoH : -0.662 0.288 -0.447 0.199 MuHd_075 : 43.847 19.334 10.458 9.669 MuHd_095 : 62.372 29.125 15.646 13.112 MuHd_100 : 48.795 29.241 13.799 10.558 MuHd_105 : 40.375 27.145 11.898 9.286 Hmax_075 : 5.367 0.933 -0.239 2.987 Hmax_095 : 8.400 10.200 1.091 3.110 Hmax_100 : 10.600 9.300 1.602 3.990 Hmax_105 : 10.733 11.667 1.966 4.713 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0473 0.9527 DFMC : 0.1262 0.8738 This protein is probably imported in mitochondria. f(Ser) = 0.0169 f(Arg) = 0.1186 CMi = 0.07179 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 635 PcyM_0111000 MAEVTNKPAGRGPQNRPGNRPTNRGGNKAANRGPNQSANQPANKTPNRAPNGVPRVTQNETARVTQSEAARVTQSETAKE 80 SEKKAMNNAANQAENKTSNEIEKKTSAEPEKKAAAEPEKKAAAEPEKKASAEPEKKAAAEPEKKTQTEPEKKTPIEPEKK 160 IPDETEKATSGSANKETRQTEKETPHKVADKVAKESPNRDANKAANRDANKAANRDADKAANRDANKAANRDANKAANKA 240 ADGDNDGRQNDILKTGSFISRDGLELKTYEWVVNKPVGIIILVHALNSHVRFEYLKHNVIIESKEKAILVDAKNYYIYKG 320 SWIEQFNKRGYSVYGLDMRGHGQSGCVQNVKTHVNDFQELVYDVLEYANIVYDSLCSGGKKKKKEKKTAYGGVINTSSDM 400 ASSAASTSDDDNTSPGSHISPGSASSSKEQLPSGMNNIKKNDIPPFYFMGLSMGGNIVLRVLELREKKGDESIKRLNIKG 480 VISLAGMISLDDLKKKPEYKYFYLPIAKLASTLLPTMRLSPVLKFEMFPYINDLFSFDANCYHKPITNRFGNEILKAVDA 560 LHNDIRFIPEDVQILIVHSVLDSACSYTGVSKFFNSIQTKNKELFTIDDMDHILPQEPGNEKILKKVIDWLAQLQ 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0111000 7 MAEVTNK|PA 0.085 . PcyM_0111000 11 TNKPAGR|GP 0.091 . PcyM_0111000 16 GRGPQNR|PG 0.099 . PcyM_0111000 20 QNRPGNR|PT 0.105 . PcyM_0111000 24 GNRPTNR|GG 0.118 . PcyM_0111000 28 TNRGGNK|AA 0.096 . PcyM_0111000 32 GNKAANR|GP 0.110 . PcyM_0111000 44 ANQPANK|TP 0.067 . PcyM_0111000 48 ANKTPNR|AP 0.098 . PcyM_0111000 55 APNGVPR|VT 0.115 . PcyM_0111000 63 TQNETAR|VT 0.101 . PcyM_0111000 71 TQSEAAR|VT 0.111 . PcyM_0111000 79 TQSETAK|ES 0.089 . PcyM_0111000 83 TAKESEK|KA 0.067 . PcyM_0111000 84 AKESEKK|AM 0.110 . PcyM_0111000 96 ANQAENK|TS 0.069 . PcyM_0111000 103 TSNEIEK|KT 0.085 . PcyM_0111000 104 SNEIEKK|TS 0.094 . PcyM_0111000 111 TSAEPEK|KA 0.078 . PcyM_0111000 112 SAEPEKK|AA 0.118 . PcyM_0111000 119 AAAEPEK|KA 0.071 . PcyM_0111000 120 AAEPEKK|AA 0.105 . PcyM_0111000 127 AAAEPEK|KA 0.078 . PcyM_0111000 128 AAEPEKK|AS 0.091 . PcyM_0111000 135 ASAEPEK|KA 0.072 . PcyM_0111000 136 SAEPEKK|AA 0.114 . PcyM_0111000 143 AAAEPEK|KT 0.068 . PcyM_0111000 144 AAEPEKK|TQ 0.083 . PcyM_0111000 151 TQTEPEK|KT 0.062 . PcyM_0111000 152 QTEPEKK|TP 0.081 . PcyM_0111000 159 TPIEPEK|KI 0.071 . PcyM_0111000 160 PIEPEKK|IP 0.092 . PcyM_0111000 167 IPDETEK|AT 0.071 . PcyM_0111000 175 TSGSANK|ET 0.074 . PcyM_0111000 178 SANKETR|QT 0.187 . PcyM_0111000 182 ETRQTEK|ET 0.066 . PcyM_0111000 187 EKETPHK|VA 0.073 . PcyM_0111000 191 PHKVADK|VA 0.066 . PcyM_0111000 194 VADKVAK|ES 0.063 . PcyM_0111000 199 AKESPNR|DA 0.117 . PcyM_0111000 203 PNRDANK|AA 0.072 . PcyM_0111000 207 ANKAANR|DA 0.134 . PcyM_0111000 211 ANRDANK|AA 0.067 . PcyM_0111000 215 ANKAANR|DA 0.163 . PcyM_0111000 219 ANRDADK|AA 0.067 . PcyM_0111000 223 ADKAANR|DA 0.126 . PcyM_0111000 227 ANRDANK|AA 0.066 . PcyM_0111000 231 ANKAANR|DA 0.135 . PcyM_0111000 235 ANRDANK|AA 0.079 . PcyM_0111000 239 ANKAANK|AA 0.075 . PcyM_0111000 248 DGDNDGR|QN 0.082 . PcyM_0111000 254 RQNDILK|TG 0.064 . PcyM_0111000 261 TGSFISR|DG 0.102 . PcyM_0111000 267 RDGLELK|TY 0.068 . PcyM_0111000 275 YEWVVNK|PV 0.096 . PcyM_0111000 291 ALNSHVR|FE 0.098 . PcyM_0111000 296 VRFEYLK|HN 0.066 . PcyM_0111000 304 NVIIESK|EK 0.056 . PcyM_0111000 306 IIESKEK|AI 0.060 . PcyM_0111000 313 AILVDAK|NY 0.067 . PcyM_0111000 319 KNYYIYK|GS 0.073 . PcyM_0111000 328 WIEQFNK|RG 0.057 . PcyM_0111000 329 IEQFNKR|GY 0.268 . PcyM_0111000 339 VYGLDMR|GH 0.107 . PcyM_0111000 351 GCVQNVK|TH 0.055 . PcyM_0111000 380 SLCSGGK|KK 0.060 . PcyM_0111000 381 LCSGGKK|KK 0.092 . PcyM_0111000 382 CSGGKKK|KK 0.142 . PcyM_0111000 383 SGGKKKK|KE 0.098 . PcyM_0111000 384 GGKKKKK|EK 0.141 . PcyM_0111000 386 KKKKKEK|KT 0.077 . PcyM_0111000 387 KKKKEKK|TA 0.177 . PcyM_0111000 428 GSASSSK|EQ 0.067 . PcyM_0111000 439 SGMNNIK|KN 0.064 . PcyM_0111000 440 GMNNIKK|ND 0.112 . PcyM_0111000 460 GGNIVLR|VL 0.092 . PcyM_0111000 465 LRVLELR|EK 0.085 . PcyM_0111000 467 VLELREK|KG 0.058 . PcyM_0111000 468 LELREKK|GD 0.221 . PcyM_0111000 474 KGDESIK|RL 0.067 . PcyM_0111000 475 GDESIKR|LN 0.180 . PcyM_0111000 479 IKRLNIK|GV 0.092 . PcyM_0111000 494 ISLDDLK|KK 0.052 . PcyM_0111000 495 SLDDLKK|KP 0.084 . PcyM_0111000 496 LDDLKKK|PE 0.100 . PcyM_0111000 500 KKKPEYK|YF 0.063 . PcyM_0111000 508 FYLPIAK|LA 0.072 . PcyM_0111000 518 TLLPTMR|LS 0.075 . PcyM_0111000 524 RLSPVLK|FE 0.064 . PcyM_0111000 544 DANCYHK|PI 0.068 . PcyM_0111000 549 HKPITNR|FG 0.114 . PcyM_0111000 556 FGNEILK|AV 0.079 . PcyM_0111000 566 ALHNDIR|FI 0.103 . PcyM_0111000 592 SYTGVSK|FF 0.065 . PcyM_0111000 600 FNSIQTK|NK 0.066 . PcyM_0111000 602 SIQTKNK|EL 0.082 . PcyM_0111000 622 QEPGNEK|IL 0.063 . PcyM_0111000 625 GNEKILK|KV 0.108 . PcyM_0111000 626 NEKILKK|VI 0.099 . ____________________________^_________________

Fasta :-
>PcyM_0111000 ATGGCGGAGGTCACAAATAAACCAGCCGGTAGGGGGCCCCAGAACAGACCCGGGAACAGG CCAACCAACAGGGGCGGGAATAAGGCGGCCAACCGGGGCCCCAACCAGTCGGCGAACCAG CCAGCCAATAAGACCCCGAATCGGGCCCCAAACGGGGTACCAAGGGTGACTCAGAATGAG ACCGCAAGGGTGACCCAGAGTGAGGCCGCAAGGGTGACTCAGAGTGAGACCGCAAAAGAG AGCGAGAAGAAGGCCATGAATAATGCCGCCAATCAGGCAGAGAATAAGACCTCCAACGAG ATTGAGAAGAAGACCTCAGCTGAACCTGAGAAGAAGGCCGCAGCTGAACCTGAGAAGAAG GCCGCAGCTGAACCTGAGAAGAAGGCCTCAGCTGAACCTGAGAAGAAGGCCGCAGCTGAA CCTGAGAAGAAGACCCAAACTGAACCTGAGAAGAAGACCCCAATTGAACCAGAGAAAAAA ATCCCAGATGAGACCGAAAAGGCCACAAGTGGAAGCGCGAACAAGGAAACACGTCAGACT GAGAAGGAGACGCCTCATAAGGTAGCCGATAAGGTGGCAAAGGAATCCCCTAACAGGGAT GCTAACAAGGCCGCTAACAGGGATGCTAACAAGGCCGCTAACAGGGATGCTGACAAGGCC GCTAACAGGGATGCTAACAAGGCCGCCAACAGGGATGCCAACAAGGCCGCTAACAAAGCT GCGGATGGTGATAATGATGGAAGGCAGAACGACATCCTGAAGACGGGGTCCTTCATAAGT CGAGACGGACTAGAGCTGAAGACATACGAGTGGGTGGTGAACAAACCAGTCGGAATAATA ATACTAGTGCATGCCTTGAATTCCCATGTGAGATTTGAATACCTAAAGCATAATGTCATA ATAGAGAGCAAAGAAAAGGCCATTCTTGTCGATGCAAAAAATTATTATATTTACAAAGGC AGCTGGATTGAGCAATTCAACAAAAGGGGGTACTCAGTCTACGGTCTAGACATGAGAGGA CATGGACAGTCAGGGTGCGTACAAAATGTGAAGACTCACGTAAATGATTTTCAAGAATTA GTTTACGATGTGCTGGAGTATGCCAACATTGTATACGACTCATTATGCTCAGGTGGGAAA AAAAAGAAAAAAGAAAAAAAAACAGCATATGGAGGTGTTATTAATACTTCCAGTGATATG GCATCTTCCGCTGCATCAACCTCTGATGATGATAACACTTCACCTGGAAGTCATATCTCT CCAGGAAGTGCTTCATCCAGTAAGGAACAACTCCCTAGTGGCATGAACAATATCAAAAAG AATGACATCCCACCATTCTACTTCATGGGTCTGTCTATGGGAGGAAATATCGTTTTAAGG GTATTAGAATTGAGAGAAAAAAAAGGAGATGAATCGATTAAGCGATTGAACATTAAGGGA GTGATTAGTCTAGCTGGTATGATTTCCCTAGATGACCTGAAGAAAAAGCCAGAATATAAG TACTTCTACCTACCTATAGCAAAACTTGCATCCACCCTTCTACCCACCATGAGACTGAGT CCTGTCCTTAAGTTTGAGATGTTCCCCTACATTAATGACCTGTTTAGTTTTGACGCCAAT TGTTACCATAAACCCATAACGAACCGATTCGGGAATGAAATTTTAAAAGCGGTAGATGCT TTACACAATGATATCAGGTTCATTCCAGAAGACGTACAAATTTTGATTGTGCATTCTGTA CTAGACAGCGCTTGTTCCTACACAGGAGTGTCGAAATTTTTTAATTCTATTCAAACGAAG AACAAGGAGTTATTTACCATTGATGATATGGACCATATACTTCCTCAGGAGCCGGGGAAT GAGAAAATCCTCAAGAAGGTTATCGACTGGCTGGCTCAGCTGCAGTGA
Download Fasta

Fasta :-

MAEVTNKPAGRGPQNRPGNRPTNRGGNKAANRGPNQSANQPANKTPNRAPNGVPRVTQNE TARVTQSEAARVTQSETAKESEKKAMNNAANQAENKTSNEIEKKTSAEPEKKAAAEPEKK AAAEPEKKASAEPEKKAAAEPEKKTQTEPEKKTPIEPEKKIPDETEKATSGSANKETRQT EKETPHKVADKVAKESPNRDANKAANRDANKAANRDADKAANRDANKAANRDANKAANKA ADGDNDGRQNDILKTGSFISRDGLELKTYEWVVNKPVGIIILVHALNSHVRFEYLKHNVI IESKEKAILVDAKNYYIYKGSWIEQFNKRGYSVYGLDMRGHGQSGCVQNVKTHVNDFQEL VYDVLEYANIVYDSLCSGGKKKKKEKKTAYGGVINTSSDMASSAASTSDDDNTSPGSHIS PGSASSSKEQLPSGMNNIKKNDIPPFYFMGLSMGGNIVLRVLELREKKGDESIKRLNIKG VISLAGMISLDDLKKKPEYKYFYLPIAKLASTLLPTMRLSPVLKFEMFPYINDLFSFDAN CYHKPITNRFGNEILKAVDALHNDIRFIPEDVQILIVHSVLDSACSYTGVSKFFNSIQTK NKELFTIDDMDHILPQEPGNEKILKKVIDWLAQLQ

Lipase

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PcyM_0111000	170 S	EKATSGSAN	0.996	unsp	PcyM_0111000	170 S	EKATSGSAN	0.996	unsp	PcyM_0111000	170 S	EKATSGSAN	0.996	unsp	PcyM_0111000	180 T	ETRQTEKET	0.997	unsp	PcyM_0111000	406 S	SSAASTSDD	0.998	unsp	PcyM_0111000	408 S	AASTSDDDN	0.992	unsp	PcyM_0111000	426 S	GSASSSKEQ	0.997	unsp	PcyM_0111000	472 S	KGDESIKRL	0.992	unsp	PcyM_0111000	106 S	EKKTSAEPE	0.996	unsp	PcyM_0111000	130 S	EKKASAEPE	0.991	unsp

PcyM_0111000 | lysophospholipase, putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

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Computed_GO_Process_IDs:

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Curated_GO_Component_IDs:

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Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Lipase

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India