PcyM_0111100 | lysophospholipase, putative

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PcyM_0111100	OTHER	0.999992	0.000004	0.000004

No Results

Fasta :-
>PcyM_0111100 MAETQPAERDSQRGRAAGGSSSRGPSGSAGSTRLDGKPKVDSFHNRDGLTLKTYSWQVKN PIGVIFLVHGLNTHVRLEYLRHNVEVLSPDKAILKDANNYYVYKNSWIEHFNKNGYSVYG MDLQGHGQSDGWRNLKTNVKKFDDLVYDLIQYINRVHDIICLTSGKDAKSGETSNSGSAA SPKSAASPKLAASPTSAASPTSHAQKNSASWSIHNNLKNTKTPPFYIMGLSMGGNIVLRT LEILGKSKNHSTKLNIRGCICLAGMISIDELASKPSYKFFYIPCSKFFATVFPTLRLTPS LYFKKYPYVNQIFNYDKNRNKKPITCKLGYELLNAIENLNNDMAHIPKDIPILFVHSRHD SACFFGGVETFFKKMDTNVKELHVLDDMDHVLTIEPGNERVLQKVLAWLSALSPPAATRA
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0111100.fa Sequence name : PcyM_0111100 Sequence length : 420 VALUES OF COMPUTED PARAMETERS Coef20 : 3.558 CoefTot : 0.141 ChDiff : 16 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.400 1.353 0.125 0.559 MesoH : -0.219 0.437 -0.270 0.228 MuHd_075 : 27.110 14.249 5.459 5.551 MuHd_095 : 7.848 2.628 2.976 2.975 MuHd_100 : 14.646 4.620 3.997 3.789 MuHd_105 : 23.380 8.738 5.472 4.946 Hmax_075 : 5.337 2.800 -1.033 1.934 Hmax_095 : -9.450 -3.500 -3.566 1.137 Hmax_100 : -11.600 -5.000 -4.010 0.680 Hmax_105 : 10.400 3.200 0.788 2.610 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8961 0.1039 DFMC : 0.9090 0.0910

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 420 PcyM_0111100 MAETQPAERDSQRGRAAGGSSSRGPSGSAGSTRLDGKPKVDSFHNRDGLTLKTYSWQVKNPIGVIFLVHGLNTHVRLEYL 80 RHNVEVLSPDKAILKDANNYYVYKNSWIEHFNKNGYSVYGMDLQGHGQSDGWRNLKTNVKKFDDLVYDLIQYINRVHDII 160 CLTSGKDAKSGETSNSGSAASPKSAASPKLAASPTSAASPTSHAQKNSASWSIHNNLKNTKTPPFYIMGLSMGGNIVLRT 240 LEILGKSKNHSTKLNIRGCICLAGMISIDELASKPSYKFFYIPCSKFFATVFPTLRLTPSLYFKKYPYVNQIFNYDKNRN 320 KKPITCKLGYELLNAIENLNNDMAHIPKDIPILFVHSRHDSACFFGGVETFFKKMDTNVKELHVLDDMDHVLTIEPGNER 400 VLQKVLAWLSALSPPAATRA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0111100 9 ETQPAER|DS 0.101 . PcyM_0111100 13 AERDSQR|GR 0.124 . PcyM_0111100 15 RDSQRGR|AA 0.212 . PcyM_0111100 23 AGGSSSR|GP 0.098 . PcyM_0111100 33 GSAGSTR|LD 0.122 . PcyM_0111100 37 STRLDGK|PK 0.069 . PcyM_0111100 39 RLDGKPK|VD 0.068 . PcyM_0111100 46 VDSFHNR|DG 0.128 . PcyM_0111100 52 RDGLTLK|TY 0.071 . PcyM_0111100 59 TYSWQVK|NP 0.079 . PcyM_0111100 76 GLNTHVR|LE 0.083 . PcyM_0111100 81 VRLEYLR|HN 0.079 . PcyM_0111100 91 EVLSPDK|AI 0.054 . PcyM_0111100 95 PDKAILK|DA 0.067 . PcyM_0111100 104 NNYYVYK|NS 0.068 . PcyM_0111100 113 WIEHFNK|NG 0.064 . PcyM_0111100 133 GQSDGWR|NL 0.108 . PcyM_0111100 136 DGWRNLK|TN 0.107 . PcyM_0111100 140 NLKTNVK|KF 0.061 . PcyM_0111100 141 LKTNVKK|FD 0.122 . PcyM_0111100 155 LIQYINR|VH 0.082 . PcyM_0111100 166 ICLTSGK|DA 0.082 . PcyM_0111100 169 TSGKDAK|SG 0.123 . PcyM_0111100 183 GSAASPK|SA 0.102 . PcyM_0111100 189 KSAASPK|LA 0.072 . PcyM_0111100 206 PTSHAQK|NS 0.062 . PcyM_0111100 218 SIHNNLK|NT 0.062 . PcyM_0111100 221 NNLKNTK|TP 0.058 . PcyM_0111100 239 GGNIVLR|TL 0.114 . PcyM_0111100 246 TLEILGK|SK 0.080 . PcyM_0111100 248 EILGKSK|NH 0.065 . PcyM_0111100 253 SKNHSTK|LN 0.080 . PcyM_0111100 257 STKLNIR|GC 0.088 . PcyM_0111100 274 IDELASK|PS 0.062 . PcyM_0111100 278 ASKPSYK|FF 0.070 . PcyM_0111100 286 FYIPCSK|FF 0.069 . PcyM_0111100 296 TVFPTLR|LT 0.066 . PcyM_0111100 304 TPSLYFK|KY 0.071 . PcyM_0111100 305 PSLYFKK|YP 0.090 . PcyM_0111100 317 QIFNYDK|NR 0.060 . PcyM_0111100 319 FNYDKNR|NK 0.093 . PcyM_0111100 321 YDKNRNK|KP 0.060 . PcyM_0111100 322 DKNRNKK|PI 0.431 . PcyM_0111100 327 KKPITCK|LG 0.064 . PcyM_0111100 348 DMAHIPK|DI 0.080 . PcyM_0111100 358 ILFVHSR|HD 0.136 . PcyM_0111100 373 GVETFFK|KM 0.065 . PcyM_0111100 374 VETFFKK|MD 0.088 . PcyM_0111100 380 KMDTNVK|EL 0.063 . PcyM_0111100 400 IEPGNER|VL 0.083 . PcyM_0111100 404 NERVLQK|VL 0.061 . PcyM_0111100 419 SPPAATR|A- 0.104 . ____________________________^_________________

Fasta :-
>PcyM_0111100 ATGGCCGAGACGCAGCCCGCGGAACGGGACAGCCAGAGGGGCCGGGCGGCCGGGGGGTCC AGCTCGAGGGGCCCAAGCGGCTCCGCCGGTAGCACGCGCTTGGACGGAAAACCCAAAGTA GATTCTTTCCATAACCGAGATGGACTCACTTTGAAGACCTACTCCTGGCAAGTAAAGAAC CCAATAGGAGTCATATTCCTAGTGCATGGACTAAACACACACGTACGGTTAGAGTACCTG CGACACAACGTAGAGGTACTGAGCCCAGATAAAGCTATTCTAAAGGATGCAAATAATTAT TACGTTTACAAGAACAGCTGGATTGAGCATTTCAACAAAAATGGCTACTCAGTGTATGGC ATGGACCTACAGGGACATGGACAGTCAGATGGATGGAGGAATTTAAAAACAAATGTGAAA AAATTTGATGATTTGGTTTATGATCTGATACAGTACATTAATAGAGTACATGACATTATA TGTCTGACGAGTGGGAAGGATGCAAAGAGTGGGGAAACGAGTAACAGCGGTTCTGCGGCG TCTCCCAAGTCGGCGGCGTCTCCCAAGTTGGCGGCTTCCCCCACGTCTGCAGCTTCCCCC ACATCCCACGCGCAGAAGAACAGCGCCTCGTGGTCCATTCACAACAACCTGAAAAACACG AAAACGCCGCCCTTCTACATCATGGGCCTCTCCATGGGGGGAAACATAGTACTAAGAACG TTAGAAATTTTAGGGAAATCAAAAAACCATAGCACAAAGCTGAATATAAGAGGATGTATA TGTCTAGCTGGGATGATTTCCATCGATGAATTAGCCTCCAAACCCTCATACAAATTTTTT TACATTCCTTGTAGCAAATTTTTTGCCACTGTCTTTCCAACCCTCCGACTGACGCCATCA TTGTACTTCAAAAAATACCCTTACGTTAATCAGATTTTTAATTATGACAAAAATCGAAAT AAAAAACCGATCACGTGCAAGTTAGGATATGAACTCCTGAACGCTATAGAAAATTTAAAT AATGACATGGCTCATATTCCAAAGGACATTCCCATCCTTTTTGTCCACTCCAGACATGAC AGTGCTTGTTTCTTTGGGGGCGTTGAAACCTTTTTTAAAAAAATGGATACGAACGTTAAG GAGCTACACGTCCTGGATGATATGGACCACGTCCTCACCATTGAGCCGGGCAACGAGCGG GTTCTGCAGAAGGTGCTTGCGTGGCTGTCCGCCCTCTCTCCGCCGGCCGCGACCCGCGCC TAG
Download Fasta

Fasta :-

MAETQPAERDSQRGRAAGGSSSRGPSGSAGSTRLDGKPKVDSFHNRDGLTLKTYSWQVKN PIGVIFLVHGLNTHVRLEYLRHNVEVLSPDKAILKDANNYYVYKNSWIEHFNKNGYSVYG MDLQGHGQSDGWRNLKTNVKKFDDLVYDLIQYINRVHDIICLTSGKDAKSGETSNSGSAA SPKSAASPKLAASPTSAASPTSHAQKNSASWSIHNNLKNTKTPPFYIMGLSMGGNIVLRT LEILGKSKNHSTKLNIRGCICLAGMISIDELASKPSYKFFYIPCSKFFATVFPTLRLTPS LYFKKYPYVNQIFNYDKNRNKKPITCKLGYELLNAIENLNNDMAHIPKDIPILFVHSRHD SACFFGGVETFFKKMDTNVKELHVLDDMDHVLTIEPGNERVLQKVLAWLSALSPPAATRA

Carboxylesterase/lipase

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PcyM_0111100	164 S	ICLTSGKDA	0.997	unsp	PcyM_0111100	164 S	ICLTSGKDA	0.997	unsp	PcyM_0111100	164 S	ICLTSGKDA	0.997	unsp	PcyM_0111100	181 S	GSAASPKSA	0.996	unsp	PcyM_0111100	187 S	KSAASPKLA	0.996	unsp	PcyM_0111100	199 S	TSAASPTSH	0.992	unsp	PcyM_0111100	251 S	SKNHSTKLN	0.994	unsp	PcyM_0111100	357 S	LFVHSRHDS	0.994	unsp	PcyM_0111100	11 S	AERDSQRGR	0.994	unsp	PcyM_0111100	26 S	SRGPSGSAG	0.994	unsp

PcyM_0111100 | lysophospholipase, putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Carboxylesterase/lipase

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India