PcyM_0113200 | plasmepsin X, putative

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0113200SP0.0235940.9762720.000134CS pos: 26-27. ATC-HK. Pr: 0.9101
No Results

  • Fasta :-

    >PcyM_0113200 MKHAKGLRMLFCGALFLLHFCREATCHKVYKVGPEPIPCSQCKDVRECSGCMFEEEESPH AIHLKLNKNKPNDHRNLKKHHDSLKLGGVKYYVKRGEGISGSLGNPLGNTLDDIDSINEE IKNRREESAKGGRNFIDITSYRKDSLSDSFVDVQRHTYVEAGSADREGEQKGGQQMGGEQ RGGQHSGDQPSGSDERAEDPPPRVEKNFIDLKDTNAVVEQTEENVFLIPLKHMRDSQFVG TLLVGVPPQEIHPIFDTGSTNLWVVTTDCEENSCKKVNRYNPYKSRTFRRSFIGKNLHIV FGSGSISGSIGKETFVLGDHTVRNQTFGLVESESNDSLNGDNIFDYIDFEGIVGLGFPEM LSAGKVSFFDNLLNQNKNLSPQFSFYISPDDNTSTFIVGGLSKSFYEGNIYMLPVVKEYY WEVELDGIYVGEKKICCEEKSYAIFDTGTSYNTMPSAQIKEFFDVVPSVPCTEENYQDVL KNYPVIKYVFGDLVIELMPEEYMILNEENCIPAYMQIDVPSEKNHAYLLGSIAFMRHYYT VFVRGMGGKPSMVGIAKAKPAAVAAAK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0113200.fa Sequence name : PcyM_0113200 Sequence length : 567 VALUES OF COMPUTED PARAMETERS Coef20 : 4.139 CoefTot : -0.042 ChDiff : -17 ZoneTo : 22 KR : 4 DE : 0 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.818 1.394 0.142 0.516 MesoH : -0.430 0.253 -0.400 0.251 MuHd_075 : 24.369 14.402 7.890 6.181 MuHd_095 : 19.012 12.069 6.098 4.598 MuHd_100 : 34.232 19.023 9.783 7.737 MuHd_105 : 39.115 21.129 10.147 9.009 Hmax_075 : 19.700 18.100 6.664 6.570 Hmax_095 : 17.500 19.400 4.725 5.513 Hmax_100 : 18.500 22.300 4.992 6.510 Hmax_105 : 18.500 22.300 5.097 6.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6428 0.3572 DFMC : 0.6795 0.3205
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 567 PcyM_0113200 MKHAKGLRMLFCGALFLLHFCREATCHKVYKVGPEPIPCSQCKDVRECSGCMFEEEESPHAIHLKLNKNKPNDHRNLKKH 80 HDSLKLGGVKYYVKRGEGISGSLGNPLGNTLDDIDSINEEIKNRREESAKGGRNFIDITSYRKDSLSDSFVDVQRHTYVE 160 AGSADREGEQKGGQQMGGEQRGGQHSGDQPSGSDERAEDPPPRVEKNFIDLKDTNAVVEQTEENVFLIPLKHMRDSQFVG 240 TLLVGVPPQEIHPIFDTGSTNLWVVTTDCEENSCKKVNRYNPYKSRTFRRSFIGKNLHIVFGSGSISGSIGKETFVLGDH 320 TVRNQTFGLVESESNDSLNGDNIFDYIDFEGIVGLGFPEMLSAGKVSFFDNLLNQNKNLSPQFSFYISPDDNTSTFIVGG 400 LSKSFYEGNIYMLPVVKEYYWEVELDGIYVGEKKICCEEKSYAIFDTGTSYNTMPSAQIKEFFDVVPSVPCTEENYQDVL 480 KNYPVIKYVFGDLVIELMPEEYMILNEENCIPAYMQIDVPSEKNHAYLLGSIAFMRHYYTVFVRGMGGKPSMVGIAKAKP 560 AAVAAAK 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ....... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0113200 2 -----MK|HA 0.075 . PcyM_0113200 5 --MKHAK|GL 0.085 . PcyM_0113200 8 KHAKGLR|ML 0.095 . PcyM_0113200 22 FLLHFCR|EA 0.094 . PcyM_0113200 28 REATCHK|VY 0.059 . PcyM_0113200 31 TCHKVYK|VG 0.067 . PcyM_0113200 43 IPCSQCK|DV 0.115 . PcyM_0113200 46 SQCKDVR|EC 0.106 . PcyM_0113200 65 PHAIHLK|LN 0.069 . PcyM_0113200 68 IHLKLNK|NK 0.055 . PcyM_0113200 70 LKLNKNK|PN 0.069 . PcyM_0113200 75 NKPNDHR|NL 0.096 . PcyM_0113200 78 NDHRNLK|KH 0.154 . PcyM_0113200 79 DHRNLKK|HH 0.100 . PcyM_0113200 85 KHHDSLK|LG 0.070 . PcyM_0113200 90 LKLGGVK|YY 0.060 . PcyM_0113200 94 GVKYYVK|RG 0.059 . PcyM_0113200 95 VKYYVKR|GE 0.265 . PcyM_0113200 122 SINEEIK|NR 0.060 . PcyM_0113200 124 NEEIKNR|RE 0.084 . PcyM_0113200 125 EEIKNRR|EE 0.136 . PcyM_0113200 130 RREESAK|GG 0.076 . PcyM_0113200 133 ESAKGGR|NF 0.091 . PcyM_0113200 142 IDITSYR|KD 0.085 . PcyM_0113200 143 DITSYRK|DS 0.061 . PcyM_0113200 155 SFVDVQR|HT 0.096 . PcyM_0113200 166 EAGSADR|EG 0.092 . PcyM_0113200 171 DREGEQK|GG 0.071 . PcyM_0113200 181 QMGGEQR|GG 0.101 . PcyM_0113200 196 PSGSDER|AE 0.082 . PcyM_0113200 203 AEDPPPR|VE 0.074 . PcyM_0113200 206 PPPRVEK|NF 0.167 . PcyM_0113200 212 KNFIDLK|DT 0.079 . PcyM_0113200 231 VFLIPLK|HM 0.064 . PcyM_0113200 234 IPLKHMR|DS 0.134 . PcyM_0113200 275 CEENSCK|KV 0.075 . PcyM_0113200 276 EENSCKK|VN 0.077 . PcyM_0113200 279 SCKKVNR|YN 0.117 . PcyM_0113200 284 NRYNPYK|SR 0.077 . PcyM_0113200 286 YNPYKSR|TF 0.093 . PcyM_0113200 289 YKSRTFR|RS 0.397 . PcyM_0113200 290 KSRTFRR|SF 0.419 . PcyM_0113200 295 RRSFIGK|NL 0.110 . PcyM_0113200 312 ISGSIGK|ET 0.070 . PcyM_0113200 323 LGDHTVR|NQ 0.079 . PcyM_0113200 365 EMLSAGK|VS 0.051 . PcyM_0113200 377 NLLNQNK|NL 0.068 . PcyM_0113200 403 IVGGLSK|SF 0.077 . PcyM_0113200 417 YMLPVVK|EY 0.058 . PcyM_0113200 433 GIYVGEK|KI 0.067 . PcyM_0113200 434 IYVGEKK|IC 0.082 . PcyM_0113200 440 KICCEEK|SY 0.088 . PcyM_0113200 460 MPSAQIK|EF 0.112 . PcyM_0113200 481 NYQDVLK|NY 0.060 . PcyM_0113200 487 KNYPVIK|YV 0.107 . PcyM_0113200 523 IDVPSEK|NH 0.059 . PcyM_0113200 536 GSIAFMR|HY 0.118 . PcyM_0113200 544 YYTVFVR|GM 0.117 . PcyM_0113200 549 VRGMGGK|PS 0.072 . PcyM_0113200 557 SMVGIAK|AK 0.069 . PcyM_0113200 559 VGIAKAK|PA 0.072 . PcyM_0113200 567 AAVAAAK|-- 0.069 . ____________________________^_________________

  • Fasta :-

    >PcyM_0113200 ATGAAGCACGCCAAGGGGTTAAGGATGCTCTTCTGTGGAGCTCTGTTTTTACTCCATTTC TGTCGGGAAGCCACATGCCACAAGGTGTATAAGGTTGGCCCAGAACCCATCCCCTGTTCT CAGTGCAAGGATGTACGCGAATGTAGTGGATGTATGTTTGAGGAGGAGGAGTCCCCACAT GCGATTCACTTGAAGCTAAACAAGAACAAGCCAAATGACCACAGAAATTTGAAGAAGCAT CATGATTCGCTGAAGCTCGGTGGGGTGAAGTACTACGTCAAGAGGGGTGAAGGGATTTCA GGCAGTTTGGGTAACCCCTTGGGGAACACTTTGGATGATATAGACAGCATTAACGAGGAG ATCAAGAACAGGCGGGAGGAGAGTGCCAAGGGGGGTAGGAACTTTATTGACATCACGAGT TATAGGAAGGACAGCCTGTCAGACTCCTTCGTGGATGTGCAGAGGCATACGTACGTGGAG GCGGGGAGCGCAGACAGGGAGGGAGAGCAGAAGGGGGGCCAACAGATGGGAGGCGAACAG AGGGGAGGCCAGCACAGTGGAGACCAACCCAGCGGAAGTGACGAACGTGCGGAGGACCCC CCCCCCAGAGTCGAAAAGAACTTCATCGACCTGAAGGACACAAACGCAGTAGTGGAACAG ACAGAAGAAAACGTGTTTCTGATCCCATTGAAGCATATGCGAGATAGCCAATTCGTGGGG ACGCTCCTAGTTGGGGTTCCTCCACAAGAGATCCATCCCATATTCGACACGGGGAGCACA AATCTTTGGGTAGTAACAACAGATTGTGAAGAAAATTCTTGTAAAAAAGTTAACAGGTAT AATCCGTACAAATCGAGAACATTTAGGAGATCCTTTATAGGGAAAAATCTACACATCGTT TTCGGATCGGGTTCTATTTCTGGATCTATTGGGAAAGAAACGTTCGTTTTGGGAGACCAC ACAGTACGGAATCAGACATTTGGATTAGTGGAGAGTGAATCAAACGACAGCCTAAATGGA GATAACATTTTTGACTATATCGATTTTGAGGGCATTGTAGGGTTAGGATTCCCAGAAATG TTATCAGCAGGAAAGGTCTCCTTCTTTGACAACTTATTAAATCAGAATAAAAATTTATCC CCCCAATTCTCCTTTTATATCTCACCTGATGATAATACATCTACGTTCATAGTGGGTGGT TTGAGTAAATCATTTTACGAAGGGAATATCTACATGCTTCCTGTGGTTAAGGAGTATTAC TGGGAAGTAGAATTGGATGGAATATACGTGGGGGAGAAGAAAATTTGTTGTGAGGAGAAG AGCTATGCAATTTTCGACACAGGGACTTCGTATAACACTATGCCGAGTGCACAGATAAAG GAATTTTTTGATGTAGTTCCTTCTGTCCCGTGTACAGAAGAGAATTACCAAGATGTGCTC AAGAATTATCCTGTGATTAAGTATGTGTTTGGTGACTTGGTCATAGAGTTGATGCCTGAG GAGTACATGATTTTAAATGAGGAGAATTGCATCCCGGCGTACATGCAAATTGACGTACCT TCGGAGAAGAACCATGCGTACCTGCTCGGAAGCATTGCCTTCATGCGGCACTACTACACG GTGTTCGTGCGCGGCATGGGCGGCAAGCCCTCCATGGTGGGCATCGCCAAGGCCAAGCCG GCCGCGGTGGCGGCGGCGAAGTGA
  • Download Fasta

  • Fasta :-

    MKHAKGLRMLFCGALFLLHFCREATCHKVYKVGPEPIPCSQCKDVRECSGCMFEEEESPH AIHLKLNKNKPNDHRNLKKHHDSLKLGGVKYYVKRGEGISGSLGNPLGNTLDDIDSINEE IKNRREESAKGGRNFIDITSYRKDSLSDSFVDVQRHTYVEAGSADREGEQKGGQQMGGEQ RGGQHSGDQPSGSDERAEDPPPRVEKNFIDLKDTNAVVEQTEENVFLIPLKHMRDSQFVG TLLVGVPPQEIHPIFDTGSTNLWVVTTDCEENSCKKVNRYNPYKSRTFRRSFIGKNLHIV FGSGSISGSIGKETFVLGDHTVRNQTFGLVESESNDSLNGDNIFDYIDFEGIVGLGFPEM LSAGKVSFFDNLLNQNKNLSPQFSFYISPDDNTSTFIVGGLSKSFYEGNIYMLPVVKEYY WEVELDGIYVGEKKICCEEKSYAIFDTGTSYNTMPSAQIKEFFDVVPSVPCTEENYQDVL KNYPVIKYVFGDLVIELMPEEYMILNEENCIPAYMQIDVPSEKNHAYLLGSIAFMRHYYT VFVRGMGGKPSMVGIAKAKPAAVAAAK

    No Results
  • title: catalytic residue
  • coordinates: D256,D446
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0113200191 SGDQPSGSDE0.996unspPcyM_0113200191 SGDQPSGSDE0.996unspPcyM_0113200191 SGDQPSGSDE0.996unspPcyM_0113200193 SQPSGSDERA0.996unspPcyM_0113200388 SSFYISPDDN0.995unspPcyM_0113200128 SRREESAKGG0.996unspPcyM_0113200145 SYRKDSLSDS0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India