PcyM_0113700 | 26S proteasome regulatory subunit RPN10, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0113700OTHER0.9986350.0008780.000488
No Results

  • Fasta :-

    >PcyM_0113700 MSPLQEALHHAASLQDALHHTASSRFTPQIDCINVLCCNKTSMHYKNNIGIVMMAGDKTK VKVSLTNDIGQLLSCIHDIKLDGTCDIVRSLLIAQLALKHRVDKNLGQKIMLFVGSPFKV SEKQLISTGKQLKKNNICLDIISYGDIHRNRDILMTLYDSVNSNDNCKYIECPETENNLS RFVLNSLLNNNDYSIGNIQEDEQLMSAMQMSLEESQQLNEQKNITSPSGAAHSPNNNDLP TIEEIENMKDIDNELKEALILSLKEYTEKNKSEKVDKKESAKQQGGDAECESKGDAGCEA NNPPHGNQHANQHGNQNAPPPPPNESNPSGENQPSDDTPFDGKGEENLTLGNENYKNNFD NGGDHHQTQIEESKEKKENESYEKVFKIDKEDANLQENTQGGGINEKSYNSEKTVSKENE GAAVSKEHPDGGDAPSPIHIQDTSYISSILGKINANVNMFIGEGADGKEQQQEEEKEEGE KEEGAGQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0113700.fa Sequence name : PcyM_0113700 Sequence length : 487 VALUES OF COMPUTED PARAMETERS Coef20 : 3.237 CoefTot : -0.174 ChDiff : -34 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.382 1.035 -0.013 0.413 MesoH : -0.813 0.384 -0.383 0.145 MuHd_075 : 25.617 18.787 8.679 5.160 MuHd_095 : 13.165 13.512 5.370 3.490 MuHd_100 : 24.896 22.510 7.888 5.868 MuHd_105 : 32.143 27.631 9.333 7.075 Hmax_075 : 12.000 13.067 1.833 4.480 Hmax_095 : 7.300 9.900 0.138 3.810 Hmax_100 : 10.900 15.300 1.212 4.790 Hmax_105 : 17.800 20.700 3.162 6.280 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9605 0.0395 DFMC : 0.9533 0.0467
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 487 PcyM_0113700 MSPLQEALHHAASLQDALHHTASSRFTPQIDCINVLCCNKTSMHYKNNIGIVMMAGDKTKVKVSLTNDIGQLLSCIHDIK 80 LDGTCDIVRSLLIAQLALKHRVDKNLGQKIMLFVGSPFKVSEKQLISTGKQLKKNNICLDIISYGDIHRNRDILMTLYDS 160 VNSNDNCKYIECPETENNLSRFVLNSLLNNNDYSIGNIQEDEQLMSAMQMSLEESQQLNEQKNITSPSGAAHSPNNNDLP 240 TIEEIENMKDIDNELKEALILSLKEYTEKNKSEKVDKKESAKQQGGDAECESKGDAGCEANNPPHGNQHANQHGNQNAPP 320 PPPNESNPSGENQPSDDTPFDGKGEENLTLGNENYKNNFDNGGDHHQTQIEESKEKKENESYEKVFKIDKEDANLQENTQ 400 GGGINEKSYNSEKTVSKENEGAAVSKEHPDGGDAPSPIHIQDTSYISSILGKINANVNMFIGEGADGKEQQQEEEKEEGE 480 KEEGAGQ 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0113700 25 HHTASSR|FT 0.105 . PcyM_0113700 40 NVLCCNK|TS 0.054 . PcyM_0113700 46 KTSMHYK|NN 0.104 . PcyM_0113700 58 VMMAGDK|TK 0.053 . PcyM_0113700 60 MAGDKTK|VK 0.062 . PcyM_0113700 62 GDKTKVK|VS 0.064 . PcyM_0113700 80 SCIHDIK|LD 0.064 . PcyM_0113700 89 GTCDIVR|SL 0.112 . PcyM_0113700 99 IAQLALK|HR 0.058 . PcyM_0113700 101 QLALKHR|VD 0.080 . PcyM_0113700 104 LKHRVDK|NL 0.329 . PcyM_0113700 109 DKNLGQK|IM 0.059 . PcyM_0113700 119 FVGSPFK|VS 0.064 . PcyM_0113700 123 PFKVSEK|QL 0.067 . PcyM_0113700 130 QLISTGK|QL 0.069 . PcyM_0113700 133 STGKQLK|KN 0.069 . PcyM_0113700 134 TGKQLKK|NN 0.086 . PcyM_0113700 149 SYGDIHR|NR 0.077 . PcyM_0113700 151 GDIHRNR|DI 0.123 . PcyM_0113700 168 NSNDNCK|YI 0.081 . PcyM_0113700 181 TENNLSR|FV 0.177 . PcyM_0113700 222 QQLNEQK|NI 0.061 . PcyM_0113700 249 EEIENMK|DI 0.081 . PcyM_0113700 256 DIDNELK|EA 0.054 . PcyM_0113700 264 ALILSLK|EY 0.058 . PcyM_0113700 269 LKEYTEK|NK 0.066 . PcyM_0113700 271 EYTEKNK|SE 0.065 . PcyM_0113700 274 EKNKSEK|VD 0.064 . PcyM_0113700 277 KSEKVDK|KE 0.079 . PcyM_0113700 278 SEKVDKK|ES 0.133 . PcyM_0113700 282 DKKESAK|QQ 0.075 . PcyM_0113700 293 DAECESK|GD 0.063 . PcyM_0113700 343 DTPFDGK|GE 0.058 . PcyM_0113700 356 LGNENYK|NN 0.071 . PcyM_0113700 374 TQIEESK|EK 0.065 . PcyM_0113700 376 IEESKEK|KE 0.059 . PcyM_0113700 377 EESKEKK|EN 0.153 . PcyM_0113700 384 ENESYEK|VF 0.053 . PcyM_0113700 387 SYEKVFK|ID 0.057 . PcyM_0113700 390 KVFKIDK|ED 0.055 . PcyM_0113700 407 GGGINEK|SY 0.076 . PcyM_0113700 413 KSYNSEK|TV 0.096 . PcyM_0113700 417 SEKTVSK|EN 0.071 . PcyM_0113700 426 EGAAVSK|EH 0.075 . PcyM_0113700 452 ISSILGK|IN 0.077 . PcyM_0113700 468 GEGADGK|EQ 0.068 . PcyM_0113700 476 QQQEEEK|EE 0.071 . PcyM_0113700 481 EKEEGEK|EE 0.068 . ____________________________^_________________

  • Fasta :-

    >PcyM_0113700 ATGTCACCACTCCAGGAAGCGTTACACCACGCCGCTTCACTCCAGGATGCGTTACACCAC ACCGCTTCATCCCGCTTCACCCCCCAGATCGACTGCATCAACGTGCTGTGCTGCAACAAA ACGAGCATGCACTACAAAAACAACATCGGAATCGTTATGATGGCAGGAGATAAAACGAAA GTAAAGGTATCCCTAACGAATGACATAGGACAGTTACTCTCCTGTATCCACGACATAAAG CTAGACGGAACATGTGACATCGTGAGAAGTCTGCTTATCGCACAGCTAGCCCTGAAGCAC AGAGTGGATAAGAATCTGGGCCAAAAAATTATGCTTTTCGTAGGAAGTCCATTCAAAGTA AGCGAAAAACAGCTAATAAGTACAGGAAAACAACTAAAAAAAAATAACATCTGCCTGGAT ATTATTAGCTATGGAGACATACACAGAAATAGAGATATACTTATGACACTATACGACAGT GTCAATAGTAATGATAACTGTAAATATATTGAGTGTCCAGAAACGGAGAATAATCTGAGT AGATTTGTTTTAAATTCGTTACTGAACAACAACGATTATAGTATTGGGAATATCCAGGAG GATGAACAACTAATGAGTGCTATGCAGATGTCACTTGAGGAGAGTCAACAGTTAAATGAA CAGAAAAATATTACTTCCCCGAGTGGTGCTGCTCACTCTCCTAATAACAACGACCTACCC ACTATTGAAGAGATCGAAAATATGAAAGACATTGATAATGAGTTGAAGGAGGCCTTAATT TTATCTCTCAAGGAATACACGGAGAAGAACAAGTCGGAAAAGGTGGACAAGAAGGAGAGT GCCAAGCAGCAGGGAGGAGATGCGGAGTGCGAATCGAAGGGAGATGCGGGGTGCGAAGCG AATAACCCCCCGCACGGTAATCAGCACGCTAATCAGCACGGTAATCAGAACGCCCCCCCC CCTCCTCCAAATGAAAGCAACCCATCAGGAGAAAACCAACCAAGTGATGACACCCCCTTC GATGGAAAAGGTGAAGAAAATTTGACTCTCGGAAATGAAAACTATAAAAATAATTTCGAC AATGGAGGAGACCACCATCAGACACAGATCGAAGAATCCAAAGAAAAAAAAGAAAACGAG AGCTACGAAAAGGTGTTCAAAATAGATAAGGAGGATGCTAATTTACAGGAAAACACTCAA GGAGGTGGCATAAATGAAAAGTCGTATAATTCGGAGAAAACCGTTTCCAAAGAGAATGAG GGGGCGGCTGTGTCCAAGGAGCACCCGGACGGAGGGGATGCTCCTTCGCCCATTCACATT CAGGACACCAGCTATATCTCCAGCATCCTGGGGAAGATTAACGCGAACGTTAATATGTTT ATTGGTGAAGGAGCCGACGGGAAGGAGCAGCAGCAGGAGGAGGAGAAGGAGGAGGGGGAG AAAGAGGAGGGGGCGGGTCAGTAG
  • Download Fasta

  • Fasta :-

    MSPLQEALHHAASLQDALHHTASSRFTPQIDCINVLCCNKTSMHYKNNIGIVMMAGDKTK VKVSLTNDIGQLLSCIHDIKLDGTCDIVRSLLIAQLALKHRVDKNLGQKIMLFVGSPFKV SEKQLISTGKQLKKNNICLDIISYGDIHRNRDILMTLYDSVNSNDNCKYIECPETENNLS RFVLNSLLNNNDYSIGNIQEDEQLMSAMQMSLEESQQLNEQKNITSPSGAAHSPNNNDLP TIEEIENMKDIDNELKEALILSLKEYTEKNKSEKVDKKESAKQQGGDAECESKGDAGCEA NNPPHGNQHANQHGNQNAPPPPPNESNPSGENQPSDDTPFDGKGEENLTLGNENYKNNFD NGGDHHQTQIEESKEKKENESYEKVFKIDKEDANLQENTQGGGINEKSYNSEKTVSKENE GAAVSKEHPDGGDAPSPIHIQDTSYISSILGKINANVNMFIGEGADGKEQQQEEEKEEGE KEEGAGQ

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0113700373 SQIEESKEKK0.993unspPcyM_0113700373 SQIEESKEKK0.993unspPcyM_0113700373 SQIEESKEKK0.993unspPcyM_0113700416 SEKTVSKENE0.992unspPcyM_0113700272 SEKNKSEKVD0.997unspPcyM_0113700329 SESNPSGENQ0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India