PcyM_0416300 | serine-repeat antigen 3 (SERA)

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0416300SP0.0019600.9980330.000006CS pos: 22-23. ARC-AQ. Pr: 0.5124
No Results

  • Fasta :-

    >PcyM_0416300 MKSRICALLLIGLALANGGARCAQTGNGGPSASSNPGGPSPDNAAGQSPSTGSGGDVSST GSSSSNSGAGGGSDPAAEASRADGSPSPQENNLNIPSPVPQPSNIPSAASAPSAPNAASD ASASSAASADPPEAAPAPAITTNPIEVKSSLLKDQKGLKITGPCKSFFQVYLVPYLYMNV NAERSEIEMEPLFMKVDNRIKFEKEKHLLQNICADNKTFKLVLYIYEGELTIKWKVYPPK GESTNDKMVDIRKYKMKDIGQPITSMQVMVMTEKHKTIYVESKNFSVMNDIPEKCDAIAN ECFMSGVLDIQKCYHCTLLLQKKESAQECFNFVSPEIRSRFDDIQAKGEDEENPNEVELE GTIDKIFIKIYKKGENHYKEVDQLAIMDSSFKSELLKYCSLMKETDSSGALDNHELGNAE EVFAHITTMLQSNSDLNVYSLKNKLKNPAICLKKVGHWIGSKTGLVLPILEHSSVHDSAN TYVETEGSTSNSATTQSADVHLLHVSDKLFCNADYCDWTKDTSSCIAKIEAQDQGDCATS WLFASKVHLETIKCVKGYEHVPSSALYVANCSSKEAKDKCQAASNPLEFLNILEETKFLP AESDLPYSYKAVNNVCPEPKSHWQNLWENVKLLDKQYQPNSVSTKGYTAYQSDHFKGNMD AFIKLVKSEVMNKGSVIAYVKAQGVMSYDLNGKKVLSLCGGETPDLAVNIVGYGNYINGE GVKKSYWLLQNSWGKHWGDKGYFKVDMHGPDHCQKNFIHTAAVFNVDIPVVIPAPNSDPE INNYYLKKSPDFFSNFYFNKLEAESEGNSGGAKSASNNLTVQGQEGSTEESTSVQQSQNG GGESGQSAARGADGQGQSEAVAQVQEGGAVVSSQPQADTIPALPTNGVPSAEASGQQNGE AGQSVSNTLTETQNSSVTTETTEQTTQQNTQQTAQVPSAQSARAPLSTLTGSTGVIVTEV KEALHFLKNVKNGKVKSNFVSYDNADALGDEKVCSRAFSTDVDKQAECIEFCEKNWGACK GKVSPGYCLTKKRGSNDCFFCFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0416300.fa Sequence name : PcyM_0416300 Sequence length : 1043 VALUES OF COMPUTED PARAMETERS Coef20 : 4.346 CoefTot : -3.143 ChDiff : -26 ZoneTo : 73 KR : 3 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.041 1.676 0.265 0.609 MesoH : -0.038 0.116 -0.189 0.185 MuHd_075 : 24.837 16.925 6.378 4.929 MuHd_095 : 23.825 14.188 7.650 5.710 MuHd_100 : 23.686 14.653 8.619 5.730 MuHd_105 : 29.649 18.456 9.851 6.732 Hmax_075 : 6.200 24.500 0.165 6.767 Hmax_095 : 14.900 11.550 4.717 5.618 Hmax_100 : 12.700 7.500 4.147 3.710 Hmax_105 : 15.867 8.700 3.443 4.070 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9901 0.0099 DFMC : 0.9829 0.0171
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1043 PcyM_0416300 MKSRICALLLIGLALANGGARCAQTGNGGPSASSNPGGPSPDNAAGQSPSTGSGGDVSSTGSSSSNSGAGGGSDPAAEAS 80 RADGSPSPQENNLNIPSPVPQPSNIPSAASAPSAPNAASDASASSAASADPPEAAPAPAITTNPIEVKSSLLKDQKGLKI 160 TGPCKSFFQVYLVPYLYMNVNAERSEIEMEPLFMKVDNRIKFEKEKHLLQNICADNKTFKLVLYIYEGELTIKWKVYPPK 240 GESTNDKMVDIRKYKMKDIGQPITSMQVMVMTEKHKTIYVESKNFSVMNDIPEKCDAIANECFMSGVLDIQKCYHCTLLL 320 QKKESAQECFNFVSPEIRSRFDDIQAKGEDEENPNEVELEGTIDKIFIKIYKKGENHYKEVDQLAIMDSSFKSELLKYCS 400 LMKETDSSGALDNHELGNAEEVFAHITTMLQSNSDLNVYSLKNKLKNPAICLKKVGHWIGSKTGLVLPILEHSSVHDSAN 480 TYVETEGSTSNSATTQSADVHLLHVSDKLFCNADYCDWTKDTSSCIAKIEAQDQGDCATSWLFASKVHLETIKCVKGYEH 560 VPSSALYVANCSSKEAKDKCQAASNPLEFLNILEETKFLPAESDLPYSYKAVNNVCPEPKSHWQNLWENVKLLDKQYQPN 640 SVSTKGYTAYQSDHFKGNMDAFIKLVKSEVMNKGSVIAYVKAQGVMSYDLNGKKVLSLCGGETPDLAVNIVGYGNYINGE 720 GVKKSYWLLQNSWGKHWGDKGYFKVDMHGPDHCQKNFIHTAAVFNVDIPVVIPAPNSDPEINNYYLKKSPDFFSNFYFNK 800 LEAESEGNSGGAKSASNNLTVQGQEGSTEESTSVQQSQNGGGESGQSAARGADGQGQSEAVAQVQEGGAVVSSQPQADTI 880 PALPTNGVPSAEASGQQNGEAGQSVSNTLTETQNSSVTTETTEQTTQQNTQQTAQVPSAQSARAPLSTLTGSTGVIVTEV 960 KEALHFLKNVKNGKVKSNFVSYDNADALGDEKVCSRAFSTDVDKQAECIEFCEKNWGACKGKVSPGYCLTKKRGSNDCFF 1040 CFV 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ... 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0416300 2 -----MK|SR 0.078 . PcyM_0416300 4 ---MKSR|IC 0.084 . PcyM_0416300 21 LANGGAR|CA 0.140 . PcyM_0416300 81 PAAEASR|AD 0.089 . PcyM_0416300 148 TNPIEVK|SS 0.069 . PcyM_0416300 153 VKSSLLK|DQ 0.068 . PcyM_0416300 156 SLLKDQK|GL 0.066 . PcyM_0416300 159 KDQKGLK|IT 0.071 . PcyM_0416300 165 KITGPCK|SF 0.079 . PcyM_0416300 184 MNVNAER|SE 0.144 . PcyM_0416300 195 MEPLFMK|VD 0.059 . PcyM_0416300 199 FMKVDNR|IK 0.106 . PcyM_0416300 201 KVDNRIK|FE 0.056 . PcyM_0416300 204 NRIKFEK|EK 0.073 . PcyM_0416300 206 IKFEKEK|HL 0.071 . PcyM_0416300 217 NICADNK|TF 0.056 . PcyM_0416300 220 ADNKTFK|LV 0.082 . PcyM_0416300 233 EGELTIK|WK 0.056 . PcyM_0416300 235 ELTIKWK|VY 0.069 . PcyM_0416300 240 WKVYPPK|GE 0.091 . PcyM_0416300 247 GESTNDK|MV 0.100 . PcyM_0416300 252 DKMVDIR|KY 0.083 . PcyM_0416300 253 KMVDIRK|YK 0.093 . PcyM_0416300 255 VDIRKYK|MK 0.233 . PcyM_0416300 257 IRKYKMK|DI 0.196 . PcyM_0416300 274 VMVMTEK|HK 0.061 . PcyM_0416300 276 VMTEKHK|TI 0.066 . PcyM_0416300 283 TIYVESK|NF 0.081 . PcyM_0416300 294 MNDIPEK|CD 0.062 . PcyM_0416300 312 GVLDIQK|CY 0.056 . PcyM_0416300 322 CTLLLQK|KE 0.059 . PcyM_0416300 323 TLLLQKK|ES 0.102 . PcyM_0416300 338 FVSPEIR|SR 0.134 . PcyM_0416300 340 SPEIRSR|FD 0.122 . PcyM_0416300 347 FDDIQAK|GE 0.070 . PcyM_0416300 365 LEGTIDK|IF 0.063 . PcyM_0416300 369 IDKIFIK|IY 0.079 . PcyM_0416300 372 IFIKIYK|KG 0.061 . PcyM_0416300 373 FIKIYKK|GE 0.078 . PcyM_0416300 379 KGENHYK|EV 0.094 . PcyM_0416300 392 IMDSSFK|SE 0.062 . PcyM_0416300 397 FKSELLK|YC 0.074 . PcyM_0416300 403 KYCSLMK|ET 0.064 . PcyM_0416300 442 LNVYSLK|NK 0.059 . PcyM_0416300 444 VYSLKNK|LK 0.069 . PcyM_0416300 446 SLKNKLK|NP 0.069 . PcyM_0416300 453 NPAICLK|KV 0.099 . PcyM_0416300 454 PAICLKK|VG 0.085 . PcyM_0416300 462 GHWIGSK|TG 0.051 . PcyM_0416300 508 LLHVSDK|LF 0.069 . PcyM_0416300 520 DYCDWTK|DT 0.073 . PcyM_0416300 528 TSSCIAK|IE 0.079 . PcyM_0416300 546 SWLFASK|VH 0.057 . PcyM_0416300 553 VHLETIK|CV 0.075 . PcyM_0416300 556 ETIKCVK|GY 0.074 . PcyM_0416300 574 VANCSSK|EA 0.075 . PcyM_0416300 577 CSSKEAK|DK 0.134 . PcyM_0416300 579 SKEAKDK|CQ 0.074 . PcyM_0416300 597 NILEETK|FL 0.062 . PcyM_0416300 610 DLPYSYK|AV 0.084 . PcyM_0416300 620 NVCPEPK|SH 0.086 . PcyM_0416300 631 NLWENVK|LL 0.061 . PcyM_0416300 635 NVKLLDK|QY 0.056 . PcyM_0416300 645 PNSVSTK|GY 0.101 . PcyM_0416300 656 YQSDHFK|GN 0.089 . PcyM_0416300 664 NMDAFIK|LV 0.067 . PcyM_0416300 667 AFIKLVK|SE 0.064 . PcyM_0416300 673 KSEVMNK|GS 0.063 . PcyM_0416300 681 SVIAYVK|AQ 0.061 . PcyM_0416300 693 SYDLNGK|KV 0.059 . PcyM_0416300 694 YDLNGKK|VL 0.080 . PcyM_0416300 723 INGEGVK|KS 0.061 . PcyM_0416300 724 NGEGVKK|SY 0.124 . PcyM_0416300 735 LQNSWGK|HW 0.091 . PcyM_0416300 740 GKHWGDK|GY 0.089 . PcyM_0416300 744 GDKGYFK|VD 0.070 . PcyM_0416300 755 GPDHCQK|NF 0.064 . PcyM_0416300 787 INNYYLK|KS 0.065 . PcyM_0416300 788 NNYYLKK|SP 0.122 . PcyM_0416300 800 SNFYFNK|LE 0.070 . PcyM_0416300 813 GNSGGAK|SA 0.151 . PcyM_0416300 850 SGQSAAR|GA 0.196 . PcyM_0416300 943 PSAQSAR|AP 0.098 . PcyM_0416300 961 VIVTEVK|EA 0.062 . PcyM_0416300 968 EALHFLK|NV 0.072 . PcyM_0416300 971 HFLKNVK|NG 0.053 . PcyM_0416300 974 KNVKNGK|VK 0.061 . PcyM_0416300 976 VKNGKVK|SN 0.100 . PcyM_0416300 992 DALGDEK|VC 0.057 . PcyM_0416300 996 DEKVCSR|AF 0.088 . PcyM_0416300 1004 FSTDVDK|QA 0.082 . PcyM_0416300 1014 CIEFCEK|NW 0.065 . PcyM_0416300 1020 KNWGACK|GK 0.058 . PcyM_0416300 1022 WGACKGK|VS 0.064 . PcyM_0416300 1031 PGYCLTK|KR 0.062 . PcyM_0416300 1032 GYCLTKK|RG 0.075 . PcyM_0416300 1033 YCLTKKR|GS 0.256 . ____________________________^_________________

  • Fasta :-

    >PcyM_0416300 ATGAAGTCTCGCATCTGTGCCCTTCTGCTAATAGGTCTTGCGTTGGCAAATGGGGGAGCA CGATGCGCCCAAACGGGGAATGGGGGGCCTTCTGCAAGTAGTAATCCAGGAGGTCCATCC CCAGATAATGCAGCAGGTCAATCCCCAAGTACAGGCAGTGGAGGAGATGTAAGTTCTACA GGTTCTTCCAGCAGTAATTCAGGTGCAGGAGGAGGTAGCGATCCGGCAGCAGAAGCATCT CGTGCAGATGGGTCACCATCACCTCAAGAGAATAATCTGAATATACCCTCTCCTGTGCCT CAACCATCAAATATTCCCAGTGCTGCTAGTGCTCCTAGTGCTCCTAATGCTGCTAGTGAT GCTAGTGCCTCCAGTGCTGCTAGTGCAGATCCCCCAGAGGCTGCCCCTGCCCCTGCGATC ACCACAAATCCCATTGAGGTAAAATCGTCCTTGTTGAAGGACCAAAAAGGGCTCAAAATA ACAGGTCCATGCAAGTCCTTCTTTCAAGTATACCTCGTACCCTATCTCTACATGAACGTT AACGCAGAAAGAAGCGAAATTGAGATGGAGCCATTATTCATGAAGGTGGACAATAGGATC AAATTTGAGAAGGAGAAACACCTCCTGCAGAATATCTGTGCTGATAATAAAACATTTAAG CTTGTCTTGTACATTTACGAGGGAGAGCTAACCATTAAGTGGAAGGTCTATCCTCCCAAA GGAGAATCAACTAACGATAAAATGGTGGATATTAGAAAGTACAAAATGAAGGACATCGGC CAGCCTATCACTTCCATGCAAGTGATGGTGATGACTGAAAAGCATAAGACCATTTACGTG GAGAGCAAAAATTTCTCCGTCATGAATGATATCCCAGAGAAATGTGACGCTATTGCCAAC GAGTGCTTCATGAGCGGTGTATTGGACATCCAGAAGTGCTACCACTGCACACTGCTTCTA CAGAAGAAGGAGAGCGCTCAGGAATGCTTCAATTTTGTGTCCCCCGAGATTAGAAGCAGA TTTGATGATATACAAGCGAAGGGAGAAGACGAGGAGAACCCCAACGAAGTGGAACTGGAA GGAACAATTGATAAAATATTCATCAAAATTTACAAAAAGGGAGAAAATCATTACAAGGAG GTGGATCAGCTAGCCATTATGGATTCTTCTTTTAAGTCCGAACTGTTGAAGTACTGCTCA TTAATGAAGGAAACAGACTCAAGCGGTGCGCTGGACAATCACGAGCTGGGCAACGCTGAG GAGGTATTCGCACACATAACGACCATGCTGCAGAGCAACAGCGATCTTAATGTGTATTCA CTAAAGAACAAGCTTAAAAATCCAGCCATATGTTTGAAGAAAGTTGGTCACTGGATTGGA AGCAAAACGGGATTGGTACTTCCCATCCTGGAGCATAGCAGCGTGCATGATAGCGCGAAC ACCTATGTTGAAACCGAAGGCAGCACTTCCAATTCGGCCACCACCCAGAGTGCAGATGTG CATCTCTTACACGTATCAGATAAGCTGTTTTGCAATGCGGACTATTGCGATTGGACGAAG GACACCAGCAGCTGCATCGCAAAGATTGAGGCTCAGGACCAAGGAGACTGCGCCACGTCT TGGCTGTTCGCCTCGAAGGTGCACCTGGAAACGATAAAGTGTGTGAAGGGCTACGAACAC GTCCCAAGTTCTGCTCTCTACGTGGCTAACTGTTCCAGTAAAGAAGCGAAGGACAAGTGT CAAGCTGCGTCTAACCCGCTAGAATTTTTGAACATCCTGGAGGAGACCAAATTTTTGCCA GCCGAGTCGGACCTTCCATACTCTTACAAAGCGGTGAATAACGTCTGCCCGGAGCCGAAG AGTCACTGGCAAAACTTATGGGAAAATGTGAAGCTCCTAGACAAGCAGTATCAACCCAAC TCGGTAAGCACCAAGGGGTACACCGCCTACCAGAGTGACCACTTCAAAGGCAACATGGAT GCTTTTATTAAGTTGGTAAAATCAGAAGTGATGAACAAAGGATCCGTTATCGCGTATGTG AAGGCACAAGGAGTGATGTCGTACGACCTGAATGGGAAGAAGGTGCTCTCTTTGTGTGGA GGTGAAACGCCCGACCTCGCTGTCAACATAGTAGGCTATGGTAACTACATAAACGGGGAA GGAGTGAAAAAGTCTTACTGGTTACTACAAAACAGTTGGGGTAAGCACTGGGGAGACAAG GGATACTTTAAAGTGGACATGCATGGACCGGATCACTGCCAGAAGAACTTCATCCACACC GCTGCTGTCTTCAACGTGGACATCCCCGTGGTAATCCCCGCACCGAATAGCGACCCAGAA ATAAATAACTACTACTTGAAGAAATCCCCCGATTTTTTCAGTAACTTTTATTTTAATAAA CTCGAGGCGGAAAGTGAAGGCAATTCTGGCGGTGCAAAAAGTGCTAGCAACAATTTGACG GTCCAGGGGCAAGAAGGGTCAACTGAAGAATCTACGAGCGTACAACAATCACAAAATGGA GGTGGTGAATCAGGCCAATCAGCAGCAAGAGGTGCGGATGGACAAGGACAATCAGAGGCT GTAGCACAAGTACAAGAAGGAGGCGCAGTTGTTTCAAGCCAACCACAAGCAGATACCATC CCTGCCTTACCCACTAATGGAGTTCCATCTGCAGAGGCATCTGGGCAACAAAATGGAGAA GCGGGACAATCAGTATCGAATACATTAACAGAAACGCAAAATTCATCCGTGACTACGGAA ACTACAGAGCAAACCACTCAACAAAACACTCAGCAAACGGCGCAGGTACCATCAGCACAA TCCGCCAGGGCGCCCCTCTCAACGTTGACGGGTAGCACAGGAGTTATCGTGACTGAAGTA AAGGAAGCTCTCCATTTCTTGAAGAACGTGAAGAATGGAAAAGTAAAAAGTAATTTCGTG TCATACGATAATGCAGATGCCTTGGGCGATGAAAAAGTTTGCTCCAGAGCTTTCTCCACA GATGTCGATAAACAAGCGGAGTGCATCGAATTTTGTGAAAAGAATTGGGGTGCATGCAAA GGCAAGGTGTCTCCTGGATACTGCTTAACGAAGAAGAGAGGAAGCAACGATTGCTTCTTC TGTTTCGTGTAA
  • Download Fasta

  • Fasta :-

    MKSRICALLLIGLALANGGARCAQTGNGGPSASSNPGGPSPDNAAGQSPSTGSGGDVSST GSSSSNSGAGGGSDPAAEASRADGSPSPQENNLNIPSPVPQPSNIPSAASAPSAPNAASD ASASSAASADPPEAAPAPAITTNPIEVKSSLLKDQKGLKITGPCKSFFQVYLVPYLYMNV NAERSEIEMEPLFMKVDNRIKFEKEKHLLQNICADNKTFKLVLYIYEGELTIKWKVYPPK GESTNDKMVDIRKYKMKDIGQPITSMQVMVMTEKHKTIYVESKNFSVMNDIPEKCDAIAN ECFMSGVLDIQKCYHCTLLLQKKESAQECFNFVSPEIRSRFDDIQAKGEDEENPNEVELE GTIDKIFIKIYKKGENHYKEVDQLAIMDSSFKSELLKYCSLMKETDSSGALDNHELGNAE EVFAHITTMLQSNSDLNVYSLKNKLKNPAICLKKVGHWIGSKTGLVLPILEHSSVHDSAN TYVETEGSTSNSATTQSADVHLLHVSDKLFCNADYCDWTKDTSSCIAKIEAQDQGDCATS WLFASKVHLETIKCVKGYEHVPSSALYVANCSSKEAKDKCQAASNPLEFLNILEETKFLP AESDLPYSYKAVNNVCPEPKSHWQNLWENVKLLDKQYQPNSVSTKGYTAYQSDHFKGNMD AFIKLVKSEVMNKGSVIAYVKAQGVMSYDLNGKKVLSLCGGETPDLAVNIVGYGNYINGE GVKKSYWLLQNSWGKHWGDKGYFKVDMHGPDHCQKNFIHTAAVFNVDIPVVIPAPNSDPE INNYYLKKSPDFFSNFYFNKLEAESEGNSGGAKSASNNLTVQGQEGSTEESTSVQQSQNG GGESGQSAARGADGQGQSEAVAQVQEGGAVVSSQPQADTIPALPTNGVPSAEASGQQNGE AGQSVSNTLTETQNSSVTTETTEQTTQQNTQQTAQVPSAQSARAPLSTLTGSTGVIVTEV KEALHFLKNVKNGKVKSNFVSYDNADALGDEKVCSRAFSTDVDKQAECIEFCEKNWGACK GKVSPGYCLTKKRGSNDCFFCFV

  • title: active site
  • coordinates: Q534,S540,L706,N731
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_04163001035 SKKRGSNDCF0.993unspPcyM_04163001035 SKKRGSNDCF0.993unspPcyM_04163001035 SKKRGSNDCF0.993unspPcyM_041630085 SRADGSPSPQ0.99unspPcyM_0416300474 SLEHSSVHDS0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India