PcyM_0416400 | serine-repeat antigen 1 (SERA), putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0416400OTHER0.9784940.0215030.000004
No Results

  • Fasta :-

    >PcyM_0416400 MFIPVYIFPSLNLNADWLCTEGVVKCESQEGSTSHTGDSTDGDSQKNSEGGDAPSPPNSG GEEGESQDRSPAQEEPQDPQELPPQPESPPQPESPPQQDGVTHSVSQDQAHNPGTSEVPP STESNLIDTGISTNGSPPLAASAPGGDNPIQDEAQASLKPIQVKSALLKDQKGIKITGPC DATFQVFLVPYLYIDVNAKNTDIEMDPMFTKVDDKIKFEQDKYRLLNICGEGKTFKLVVF MHEDVLTIKWKVYPPKGVTASDKTLDVRKYKMRDIGRPITSIQVLVTSKNDKTLLVESKN YSVMEEIPEKCDAIANDCFMSGVLDIQKCYHCTLLLQKKKNAEECFKFVSPEIKNRFDDI QVKGEDEQDPNEVELEQSIHNILDKMYNKVEGGKHEVNHLAILDATFKEELLKYCDLMKE MDISGVLENYEMGNTDDVFAHIANMLEKNGNYAVTLLPNKMKNVAICLKNPDEWVDGKTG LLLPKLAFPHLVHKNVQDGSNSVETTVDGTPAFKEDEDGIIDLTTLDCVDVHPSVLADKL HCNDEYCDRWKDSSSCMAKIEAGDQGDCATSWLFASKVHLETIKCVKGYEHVPSSALYVA NCSSKEAKDKCQAASNPLEFLNTLEETKFLPAESDLPYSYKAVNNVCPEPKSHWQNLWEN VKLLDKQYQPNSVSTKGYTAYQSDHFKGNMDAFIKLVKSEVMNKGSAIAYVKAQGVMKYD LNGLDVHSLCGGEKPDLAVNIVGYGNYITEEGQKKSYWLLRNSWGKYWGDDGNFKVDMHG PPGCQQNFIHTAAVFNLDIPLATHPINKDPEINDYYLKNSPDYYDNLYYKKFQENGATGG VSKECVQGASTVYGQEDDQKEITEEERKVADSKDTQPTGEVAAGSLSSGSTQTRADSGQE AGTEIGTADGGSTPVVNPNEQTGGLTAGTGALPQTPAPNVETVLPTPPPPIGPPAAPAAP APNGPHTPSESPAPTVQNEPTVQTAEPVPGAPTNSTSATVESEVKEVLQILKHIKNGKVK VGLVTYDTEKRIGAEKVCSRAYAVDHEKQEECVEFCEANWDACKSTVSPGYCLTKKRGSN DCFFCFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0416400.fa Sequence name : PcyM_0416400 Sequence length : 1087 VALUES OF COMPUTED PARAMETERS Coef20 : 4.058 CoefTot : -0.434 ChDiff : -60 ZoneTo : 15 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.912 1.129 0.069 0.523 MesoH : -0.023 0.033 -0.302 0.209 MuHd_075 : 7.462 7.601 1.218 3.441 MuHd_095 : 10.821 10.201 4.059 2.370 MuHd_100 : 10.859 9.614 3.456 2.145 MuHd_105 : 14.103 9.998 2.650 2.406 Hmax_075 : 14.263 15.575 1.449 6.501 Hmax_095 : 16.900 19.600 3.431 6.940 Hmax_100 : 17.200 17.000 2.596 6.180 Hmax_105 : 12.600 11.813 1.383 5.588 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9782 0.0218 DFMC : 0.9808 0.0192
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1087 PcyM_0416400 MFIPVYIFPSLNLNADWLCTEGVVKCESQEGSTSHTGDSTDGDSQKNSEGGDAPSPPNSGGEEGESQDRSPAQEEPQDPQ 80 ELPPQPESPPQPESPPQQDGVTHSVSQDQAHNPGTSEVPPSTESNLIDTGISTNGSPPLAASAPGGDNPIQDEAQASLKP 160 IQVKSALLKDQKGIKITGPCDATFQVFLVPYLYIDVNAKNTDIEMDPMFTKVDDKIKFEQDKYRLLNICGEGKTFKLVVF 240 MHEDVLTIKWKVYPPKGVTASDKTLDVRKYKMRDIGRPITSIQVLVTSKNDKTLLVESKNYSVMEEIPEKCDAIANDCFM 320 SGVLDIQKCYHCTLLLQKKKNAEECFKFVSPEIKNRFDDIQVKGEDEQDPNEVELEQSIHNILDKMYNKVEGGKHEVNHL 400 AILDATFKEELLKYCDLMKEMDISGVLENYEMGNTDDVFAHIANMLEKNGNYAVTLLPNKMKNVAICLKNPDEWVDGKTG 480 LLLPKLAFPHLVHKNVQDGSNSVETTVDGTPAFKEDEDGIIDLTTLDCVDVHPSVLADKLHCNDEYCDRWKDSSSCMAKI 560 EAGDQGDCATSWLFASKVHLETIKCVKGYEHVPSSALYVANCSSKEAKDKCQAASNPLEFLNTLEETKFLPAESDLPYSY 640 KAVNNVCPEPKSHWQNLWENVKLLDKQYQPNSVSTKGYTAYQSDHFKGNMDAFIKLVKSEVMNKGSAIAYVKAQGVMKYD 720 LNGLDVHSLCGGEKPDLAVNIVGYGNYITEEGQKKSYWLLRNSWGKYWGDDGNFKVDMHGPPGCQQNFIHTAAVFNLDIP 800 LATHPINKDPEINDYYLKNSPDYYDNLYYKKFQENGATGGVSKECVQGASTVYGQEDDQKEITEEERKVADSKDTQPTGE 880 VAAGSLSSGSTQTRADSGQEAGTEIGTADGGSTPVVNPNEQTGGLTAGTGALPQTPAPNVETVLPTPPPPIGPPAAPAAP 960 APNGPHTPSESPAPTVQNEPTVQTAEPVPGAPTNSTSATVESEVKEVLQILKHIKNGKVKVGLVTYDTEKRIGAEKVCSR 1040 AYAVDHEKQEECVEFCEANWDACKSTVSPGYCLTKKRGSNDCFFCFV 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ............................................... 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0416400 25 CTEGVVK|CE 0.069 . PcyM_0416400 46 TDGDSQK|NS 0.077 . PcyM_0416400 69 EGESQDR|SP 0.119 . PcyM_0416400 159 EAQASLK|PI 0.063 . PcyM_0416400 164 LKPIQVK|SA 0.080 . PcyM_0416400 169 VKSALLK|DQ 0.082 . PcyM_0416400 172 ALLKDQK|GI 0.065 . PcyM_0416400 175 KDQKGIK|IT 0.081 . PcyM_0416400 199 YIDVNAK|NT 0.069 . PcyM_0416400 211 MDPMFTK|VD 0.065 . PcyM_0416400 215 FTKVDDK|IK 0.061 . PcyM_0416400 217 KVDDKIK|FE 0.067 . PcyM_0416400 222 IKFEQDK|YR 0.065 . PcyM_0416400 224 FEQDKYR|LL 0.114 . PcyM_0416400 233 NICGEGK|TF 0.060 . PcyM_0416400 236 GEGKTFK|LV 0.070 . PcyM_0416400 249 EDVLTIK|WK 0.055 . PcyM_0416400 251 VLTIKWK|VY 0.069 . PcyM_0416400 256 WKVYPPK|GV 0.118 . PcyM_0416400 263 GVTASDK|TL 0.064 . PcyM_0416400 268 DKTLDVR|KY 0.068 . PcyM_0416400 269 KTLDVRK|YK 0.079 . PcyM_0416400 271 LDVRKYK|MR 0.206 . PcyM_0416400 273 VRKYKMR|DI 0.217 . PcyM_0416400 277 KMRDIGR|PI 0.105 . PcyM_0416400 289 QVLVTSK|ND 0.056 . PcyM_0416400 292 VTSKNDK|TL 0.063 . PcyM_0416400 299 TLLVESK|NY 0.075 . PcyM_0416400 310 MEEIPEK|CD 0.065 . PcyM_0416400 328 GVLDIQK|CY 0.056 . PcyM_0416400 338 CTLLLQK|KK 0.057 . PcyM_0416400 339 TLLLQKK|KN 0.086 . PcyM_0416400 340 LLLQKKK|NA 0.137 . PcyM_0416400 347 NAEECFK|FV 0.097 . PcyM_0416400 354 FVSPEIK|NR 0.067 . PcyM_0416400 356 SPEIKNR|FD 0.156 . PcyM_0416400 363 FDDIQVK|GE 0.066 . PcyM_0416400 385 IHNILDK|MY 0.092 . PcyM_0416400 389 LDKMYNK|VE 0.060 . PcyM_0416400 394 NKVEGGK|HE 0.059 . PcyM_0416400 408 ILDATFK|EE 0.052 . PcyM_0416400 413 FKEELLK|YC 0.064 . PcyM_0416400 419 KYCDLMK|EM 0.065 . PcyM_0416400 448 IANMLEK|NG 0.067 . PcyM_0416400 460 VTLLPNK|MK 0.056 . PcyM_0416400 462 LLPNKMK|NV 0.091 . PcyM_0416400 469 NVAICLK|NP 0.060 . PcyM_0416400 478 DEWVDGK|TG 0.053 . PcyM_0416400 485 TGLLLPK|LA 0.074 . PcyM_0416400 494 FPHLVHK|NV 0.095 . PcyM_0416400 514 DGTPAFK|ED 0.063 . PcyM_0416400 539 PSVLADK|LH 0.057 . PcyM_0416400 549 NDEYCDR|WK 0.082 . PcyM_0416400 551 EYCDRWK|DS 0.073 . PcyM_0416400 559 SSSCMAK|IE 0.073 . PcyM_0416400 577 SWLFASK|VH 0.057 . PcyM_0416400 584 VHLETIK|CV 0.075 . PcyM_0416400 587 ETIKCVK|GY 0.074 . PcyM_0416400 605 VANCSSK|EA 0.075 . PcyM_0416400 608 CSSKEAK|DK 0.134 . PcyM_0416400 610 SKEAKDK|CQ 0.074 . PcyM_0416400 628 NTLEETK|FL 0.061 . PcyM_0416400 641 DLPYSYK|AV 0.084 . PcyM_0416400 651 NVCPEPK|SH 0.086 . PcyM_0416400 662 NLWENVK|LL 0.061 . PcyM_0416400 666 NVKLLDK|QY 0.056 . PcyM_0416400 676 PNSVSTK|GY 0.101 . PcyM_0416400 687 YQSDHFK|GN 0.089 . PcyM_0416400 695 NMDAFIK|LV 0.067 . PcyM_0416400 698 AFIKLVK|SE 0.063 . PcyM_0416400 704 KSEVMNK|GS 0.065 . PcyM_0416400 712 SAIAYVK|AQ 0.066 . PcyM_0416400 718 KAQGVMK|YD 0.076 . PcyM_0416400 734 SLCGGEK|PD 0.061 . PcyM_0416400 754 ITEEGQK|KS 0.058 . PcyM_0416400 755 TEEGQKK|SY 0.142 . PcyM_0416400 761 KSYWLLR|NS 0.103 . PcyM_0416400 766 LRNSWGK|YW 0.111 . PcyM_0416400 775 GDDGNFK|VD 0.062 . PcyM_0416400 808 ATHPINK|DP 0.071 . PcyM_0416400 818 INDYYLK|NS 0.059 . PcyM_0416400 830 YDNLYYK|KF 0.066 . PcyM_0416400 831 DNLYYKK|FQ 0.108 . PcyM_0416400 843 ATGGVSK|EC 0.069 . PcyM_0416400 860 GQEDDQK|EI 0.071 . PcyM_0416400 867 EITEEER|KV 0.108 . PcyM_0416400 868 ITEEERK|VA 0.084 . PcyM_0416400 873 RKVADSK|DT 0.085 . PcyM_0416400 894 SGSTQTR|AD 0.183 . PcyM_0416400 1005 TVESEVK|EV 0.082 . PcyM_0416400 1012 EVLQILK|HI 0.058 . PcyM_0416400 1015 QILKHIK|NG 0.060 . PcyM_0416400 1018 KHIKNGK|VK 0.058 . PcyM_0416400 1020 IKNGKVK|VG 0.067 . PcyM_0416400 1030 VTYDTEK|RI 0.068 . PcyM_0416400 1031 TYDTEKR|IG 0.124 . PcyM_0416400 1036 KRIGAEK|VC 0.064 . PcyM_0416400 1040 AEKVCSR|AY 0.077 . PcyM_0416400 1048 YAVDHEK|QE 0.070 . PcyM_0416400 1064 ANWDACK|ST 0.070 . PcyM_0416400 1075 PGYCLTK|KR 0.062 . PcyM_0416400 1076 GYCLTKK|RG 0.075 . PcyM_0416400 1077 YCLTKKR|GS 0.256 . ____________________________^_________________

  • Fasta :-

    >PcyM_0416400 ATGTTCATCCCTGTTTACATTTTTCCCTCTCTGAATTTGAACGCAGATTGGCTCTGCACC GAAGGTGTGGTCAAATGTGAATCACAGGAGGGAAGCACATCGCACACAGGCGATTCCACA GATGGGGATTCCCAAAAGAATTCAGAGGGAGGTGACGCTCCCTCACCACCCAATTCAGGA GGAGAGGAAGGTGAATCACAAGATAGAAGCCCTGCTCAAGAGGAACCACAAGATCCACAG GAATTACCACCTCAACCGGAATCACCACCTCAACCGGAATCACCACCTCAACAGGATGGT GTAACCCACAGTGTTTCACAAGACCAAGCACATAACCCTGGCACATCGGAAGTACCCCCT TCAACTGAGTCCAACCTCATTGATACAGGCATTAGTACTAATGGAAGTCCCCCACTTGCA GCCTCCGCACCAGGGGGTGATAATCCCATACAGGATGAAGCCCAAGCTTCTTTGAAGCCC ATTCAAGTAAAGTCAGCTCTGTTGAAGGACCAGAAGGGAATAAAGATTACCGGACCTTGT GACGCAACCTTTCAGGTTTTCCTCGTACCATACTTGTACATCGATGTCAATGCTAAAAAT ACGGACATAGAAATGGACCCCATGTTCACCAAGGTGGATGATAAAATCAAATTTGAACAA GACAAATATCGCCTGCTCAACATTTGTGGTGAGGGAAAAACCTTCAAGCTAGTTGTATTC ATGCACGAGGATGTTTTGACTATAAAATGGAAGGTGTACCCTCCCAAGGGGGTGACAGCA TCGGACAAGACGCTGGACGTGAGAAAGTACAAAATGAGGGACATCGGCAGGCCGATCACC TCCATACAAGTGTTGGTTACCTCCAAAAATGACAAAACACTTCTGGTCGAAAGCAAAAAT TACTCAGTGATGGAAGAGATACCAGAGAAATGTGACGCGATTGCCAACGATTGCTTCATG AGCGGTGTATTGGATATCCAAAAGTGTTACCACTGCACACTGCTACTGCAGAAGAAGAAG AACGCTGAGGAATGCTTCAAATTTGTGTCCCCCGAAATTAAAAACCGATTTGACGATATA CAAGTGAAGGGAGAAGACGAACAAGATCCAAACGAAGTAGAACTGGAACAATCTATTCAT AACATTTTGGACAAAATGTACAATAAGGTGGAAGGAGGAAAACATGAGGTTAACCATTTG GCCATCTTAGATGCCACCTTCAAGGAAGAACTGCTAAAGTATTGTGACCTGATGAAGGAG ATGGATATCAGTGGGGTGCTCGAAAACTACGAGATGGGTAATACAGATGATGTGTTTGCC CACATAGCAAACATGCTAGAGAAGAATGGTAATTATGCCGTCACTTTGTTGCCAAATAAA ATGAAGAACGTGGCTATTTGTTTAAAAAATCCAGACGAGTGGGTGGATGGCAAAACCGGG CTGTTGCTTCCCAAGTTAGCGTTTCCCCACTTGGTCCATAAGAACGTGCAGGATGGCTCC AACTCGGTAGAGACAACTGTAGATGGAACGCCTGCCTTTAAAGAAGACGAGGATGGAATC ATCGATTTGACAACTCTGGACTGTGTAGATGTGCACCCCAGTGTGCTCGCGGATAAGCTA CACTGCAACGATGAGTACTGCGACAGGTGGAAGGATTCAAGCAGCTGTATGGCGAAGATT GAGGCGGGGGACCAGGGAGACTGCGCTACGTCATGGCTGTTTGCCTCGAAGGTGCACCTG GAAACGATCAAGTGTGTGAAGGGTTACGAACACGTCCCAAGTTCTGCTCTCTATGTGGCT AACTGTTCCAGTAAAGAAGCGAAGGACAAGTGTCAAGCTGCGTCGAATCCGCTAGAGTTT TTGAACACCCTGGAGGAGACCAAATTTTTGCCAGCCGAGTCGGACCTTCCATACTCTTAC AAAGCGGTGAATAACGTCTGTCCCGAGCCGAAGAGTCACTGGCAAAACTTATGGGAAAAT GTGAAGCTCCTAGACAAGCAGTACCAACCCAACTCGGTGAGCACCAAGGGGTACACCGCT TACCAGAGTGACCACTTCAAAGGCAACATGGATGCTTTTATTAAGTTGGTAAAATCAGAA GTGATGAACAAAGGATCCGCAATCGCGTATGTGAAGGCACAAGGAGTGATGAAGTACGAC TTGAACGGCTTGGATGTGCATAGCTTGTGTGGTGGTGAAAAACCCGATCTCGCTGTGAAC ATAGTAGGCTATGGCAACTACATCACCGAGGAGGGACAGAAGAAATCCTACTGGTTGCTA CGAAACAGTTGGGGAAAATACTGGGGAGATGATGGCAACTTCAAGGTCGACATGCATGGT CCTCCTGGATGCCAACAGAACTTCATCCACACCGCCGCTGTCTTCAACTTGGACATACCT CTAGCCACACACCCCATCAACAAGGACCCAGAAATAAATGACTACTATTTGAAGAATTCG CCTGATTATTATGACAATTTGTATTATAAGAAGTTTCAGGAAAATGGCGCTACGGGGGGA GTCAGCAAGGAGTGCGTGCAGGGAGCCTCCACTGTGTATGGACAAGAGGATGATCAAAAA GAGATTACTGAAGAGGAAAGAAAAGTGGCAGATAGTAAGGATACCCAACCAACAGGTGAA GTCGCAGCAGGTTCACTCTCTTCAGGATCAACTCAGACAAGAGCGGACTCAGGACAGGAA GCAGGAACAGAAATAGGAACTGCTGATGGAGGATCAACGCCGGTCGTAAATCCAAACGAA CAAACGGGAGGACTCACCGCAGGCACAGGAGCATTGCCACAGACACCCGCACCAAACGTA GAAACCGTACTACCCACACCACCCCCACCAATCGGACCACCCGCAGCTCCCGCAGCACCC GCACCAAACGGACCACACACACCAAGCGAATCACCCGCACCAACCGTACAAAACGAACCA ACCGTACAAACCGCAGAACCCGTACCTGGCGCCCCGACTAACAGCACCTCAGCCACCGTC GAGTCCGAGGTTAAGGAAGTCCTTCAAATTCTGAAGCATATTAAAAACGGCAAGGTAAAG GTAGGGCTAGTCACATACGACACGGAGAAGCGGATTGGCGCGGAGAAGGTTTGCTCTAGA GCGTATGCCGTGGACCATGAGAAGCAAGAAGAGTGCGTTGAGTTTTGTGAAGCGAACTGG GATGCATGCAAAAGTACAGTGTCTCCTGGGTACTGCTTAACGAAGAAGAGAGGAAGTAAT GACTGCTTCTTTTGCTTTGTGTGA
  • Download Fasta

  • Fasta :-

    MFIPVYIFPSLNLNADWLCTEGVVKCESQEGSTSHTGDSTDGDSQKNSEGGDAPSPPNSG GEEGESQDRSPAQEEPQDPQELPPQPESPPQPESPPQQDGVTHSVSQDQAHNPGTSEVPP STESNLIDTGISTNGSPPLAASAPGGDNPIQDEAQASLKPIQVKSALLKDQKGIKITGPC DATFQVFLVPYLYIDVNAKNTDIEMDPMFTKVDDKIKFEQDKYRLLNICGEGKTFKLVVF MHEDVLTIKWKVYPPKGVTASDKTLDVRKYKMRDIGRPITSIQVLVTSKNDKTLLVESKN YSVMEEIPEKCDAIANDCFMSGVLDIQKCYHCTLLLQKKKNAEECFKFVSPEIKNRFDDI QVKGEDEQDPNEVELEQSIHNILDKMYNKVEGGKHEVNHLAILDATFKEELLKYCDLMKE MDISGVLENYEMGNTDDVFAHIANMLEKNGNYAVTLLPNKMKNVAICLKNPDEWVDGKTG LLLPKLAFPHLVHKNVQDGSNSVETTVDGTPAFKEDEDGIIDLTTLDCVDVHPSVLADKL HCNDEYCDRWKDSSSCMAKIEAGDQGDCATSWLFASKVHLETIKCVKGYEHVPSSALYVA NCSSKEAKDKCQAASNPLEFLNTLEETKFLPAESDLPYSYKAVNNVCPEPKSHWQNLWEN VKLLDKQYQPNSVSTKGYTAYQSDHFKGNMDAFIKLVKSEVMNKGSAIAYVKAQGVMKYD LNGLDVHSLCGGEKPDLAVNIVGYGNYITEEGQKKSYWLLRNSWGKYWGDDGNFKVDMHG PPGCQQNFIHTAAVFNLDIPLATHPINKDPEINDYYLKNSPDYYDNLYYKKFQENGATGG VSKECVQGASTVYGQEDDQKEITEEERKVADSKDTQPTGEVAAGSLSSGSTQTRADSGQE AGTEIGTADGGSTPVVNPNEQTGGLTAGTGALPQTPAPNVETVLPTPPPPIGPPAAPAAP APNGPHTPSESPAPTVQNEPTVQTAEPVPGAPTNSTSATVESEVKEVLQILKHIKNGKVK VGLVTYDTEKRIGAEKVCSRAYAVDHEKQEECVEFCEANWDACKSTVSPGYCLTKKRGSN DCFFCFV

  • title: active site
  • coordinates: Q565,S571,L737,N762
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0416400897 STRADSGQEA0.994unspPcyM_0416400897 STRADSGQEA0.994unspPcyM_0416400897 STRADSGQEA0.994unspPcyM_04164001079 SKKRGSNDCF0.993unspPcyM_041640044 STDGDSQKNS0.997unspPcyM_0416400121 SEVPPSTESN0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India