PcyM_0417100 | serine-repeat antigen 5 (SERA), putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0417100SP0.0001440.9998560.000000CS pos: 16-17. AYG-SN. Pr: 0.6587
No Results

  • Fasta :-

    >PcyM_0417100 MKSSFLLLLALGAAYGSNVAMCTTVPESSSGGSGGSQSTSSASGTVTENGGSSGAGLQSA SSGNEQGVTQPTNPSPPVSQAPNSAESNPSQPVQTPDQHADVPPSQSSTTPTAQGIASAS SSGNTNGQGGATQLQTSTKKAELQSALLKNFTGVKVTGPCDTEVGLFLIPHMYISVKAAK DIIELSTKFPNSDNTIIQFTKGGETLINKCEGNPEKTFMFIVYLEDNILTLKWIVYPQSE DKNKADVRKYRLPNLERPITSIQVHSVMVQEDTVIYTSKDYSIKNDIPGESRELGPTDGC SPEQNCQQTMSACFLSGNTDIESCYTCNLLIHNNDTNDKCFDYVSADFKKEFLDIKVKGQ DDEESSEYKLAQVINEVLNGIYKTDPEGNKELITSEELDENVKKHIGNYCQVLKEMDISG TMEVHQMGNEMDVFKNLVQLLQKHGEEKNSTLEWKLQNPALCLKNVNDWVVNKKGLVLPL LQNGGSDIYFGESNLVEGGQKSGLSTYQVGDDGIIDLSIEQKNSHTSSTPFTNHMFCNAD YCDWTKDSSSCMAKIEAGDQGDCATSWLFASKVHLETIKCMKGYDHIASSALYVANCSSK EAKDKCQAPSNPLEFLNILEGTKFLPAESDLPYSYKEVNNVCPEPKSHWKNLWENVKLLD KQYQPNSVSTKGYIAYQSDHFKGNMDAFIKLVKSEVMNKGSVIAYVKADELMGYDLNGKK VLSLCGGETPDLAVNIIGYGNYIHGEGVKKSYWLLQNSWGKHWGDKGKFKVDMDGLPGCQ HNFIHTAAVFNLDVPPFQSPAKDTELYSYQLKSSPDFYKNLYYNAVGEAKGSAPSQAVHG QDAPEETAVGGGENSVSTVQGQQPQPQVPSGVSTDTKAPEGADNTVSTSEISVGPSQQAQ APQSPGEGQVVSTQQQPGGSTPAPEPSAPQPAQQVDASTPVATVTPGGANPNGGAENAKM SHIIHVLKHIKQTKMVTRMVTYEGEYELGDHSCSRTQASTVEKLDECIRFCNENLYLCER TVSAGYCLTKLRNANDCIFCFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0417100.fa Sequence name : PcyM_0417100 Sequence length : 1042 VALUES OF COMPUTED PARAMETERS Coef20 : 4.323 CoefTot : -2.941 ChDiff : -38 ZoneTo : 85 KR : 1 DE : 3 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.600 1.688 0.275 0.658 MesoH : 0.340 0.181 -0.158 0.209 MuHd_075 : 20.831 16.113 6.686 4.879 MuHd_095 : 18.675 17.339 6.598 5.330 MuHd_100 : 20.575 16.411 7.432 4.914 MuHd_105 : 25.743 23.303 9.658 6.198 Hmax_075 : 9.800 2.567 1.616 3.600 Hmax_095 : 4.550 3.600 -0.517 2.686 Hmax_100 : 7.200 3.200 0.462 3.120 Hmax_105 : 8.633 7.700 1.128 4.130 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9976 0.0024 DFMC : 0.9937 0.0063
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1042 PcyM_0417100 MKSSFLLLLALGAAYGSNVAMCTTVPESSSGGSGGSQSTSSASGTVTENGGSSGAGLQSASSGNEQGVTQPTNPSPPVSQ 80 APNSAESNPSQPVQTPDQHADVPPSQSSTTPTAQGIASASSSGNTNGQGGATQLQTSTKKAELQSALLKNFTGVKVTGPC 160 DTEVGLFLIPHMYISVKAAKDIIELSTKFPNSDNTIIQFTKGGETLINKCEGNPEKTFMFIVYLEDNILTLKWIVYPQSE 240 DKNKADVRKYRLPNLERPITSIQVHSVMVQEDTVIYTSKDYSIKNDIPGESRELGPTDGCSPEQNCQQTMSACFLSGNTD 320 IESCYTCNLLIHNNDTNDKCFDYVSADFKKEFLDIKVKGQDDEESSEYKLAQVINEVLNGIYKTDPEGNKELITSEELDE 400 NVKKHIGNYCQVLKEMDISGTMEVHQMGNEMDVFKNLVQLLQKHGEEKNSTLEWKLQNPALCLKNVNDWVVNKKGLVLPL 480 LQNGGSDIYFGESNLVEGGQKSGLSTYQVGDDGIIDLSIEQKNSHTSSTPFTNHMFCNADYCDWTKDSSSCMAKIEAGDQ 560 GDCATSWLFASKVHLETIKCMKGYDHIASSALYVANCSSKEAKDKCQAPSNPLEFLNILEGTKFLPAESDLPYSYKEVNN 640 VCPEPKSHWKNLWENVKLLDKQYQPNSVSTKGYIAYQSDHFKGNMDAFIKLVKSEVMNKGSVIAYVKADELMGYDLNGKK 720 VLSLCGGETPDLAVNIIGYGNYIHGEGVKKSYWLLQNSWGKHWGDKGKFKVDMDGLPGCQHNFIHTAAVFNLDVPPFQSP 800 AKDTELYSYQLKSSPDFYKNLYYNAVGEAKGSAPSQAVHGQDAPEETAVGGGENSVSTVQGQQPQPQVPSGVSTDTKAPE 880 GADNTVSTSEISVGPSQQAQAPQSPGEGQVVSTQQQPGGSTPAPEPSAPQPAQQVDASTPVATVTPGGANPNGGAENAKM 960 SHIIHVLKHIKQTKMVTRMVTYEGEYELGDHSCSRTQASTVEKLDECIRFCNENLYLCERTVSAGYCLTKLRNANDCIFC 1040 FV 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 .. 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0417100 2 -----MK|SS 0.077 . PcyM_0417100 139 QLQTSTK|KA 0.073 . PcyM_0417100 140 LQTSTKK|AE 0.075 . PcyM_0417100 149 LQSALLK|NF 0.071 . PcyM_0417100 155 KNFTGVK|VT 0.066 . PcyM_0417100 177 HMYISVK|AA 0.084 . PcyM_0417100 180 ISVKAAK|DI 0.079 . PcyM_0417100 188 IIELSTK|FP 0.061 . PcyM_0417100 201 TIIQFTK|GG 0.070 . PcyM_0417100 209 GETLINK|CE 0.063 . PcyM_0417100 216 CEGNPEK|TF 0.061 . PcyM_0417100 232 DNILTLK|WI 0.055 . PcyM_0417100 242 YPQSEDK|NK 0.064 . PcyM_0417100 244 QSEDKNK|AD 0.066 . PcyM_0417100 248 KNKADVR|KY 0.074 . PcyM_0417100 249 NKADVRK|YR 0.101 . PcyM_0417100 251 ADVRKYR|LP 0.220 . PcyM_0417100 257 RLPNLER|PI 0.095 . PcyM_0417100 279 TVIYTSK|DY 0.093 . PcyM_0417100 284 SKDYSIK|ND 0.075 . PcyM_0417100 292 DIPGESR|EL 0.084 . PcyM_0417100 339 NNDTNDK|CF 0.061 . PcyM_0417100 349 YVSADFK|KE 0.059 . PcyM_0417100 350 VSADFKK|EF 0.103 . PcyM_0417100 356 KEFLDIK|VK 0.062 . PcyM_0417100 358 FLDIKVK|GQ 0.075 . PcyM_0417100 369 EESSEYK|LA 0.075 . PcyM_0417100 383 VLNGIYK|TD 0.060 . PcyM_0417100 390 TDPEGNK|EL 0.064 . PcyM_0417100 403 ELDENVK|KH 0.054 . PcyM_0417100 404 LDENVKK|HI 0.146 . PcyM_0417100 414 NYCQVLK|EM 0.068 . PcyM_0417100 435 NEMDVFK|NL 0.069 . PcyM_0417100 443 LVQLLQK|HG 0.064 . PcyM_0417100 448 QKHGEEK|NS 0.061 . PcyM_0417100 455 NSTLEWK|LQ 0.067 . PcyM_0417100 464 NPALCLK|NV 0.076 . PcyM_0417100 473 NDWVVNK|KG 0.056 . PcyM_0417100 474 DWVVNKK|GL 0.087 . PcyM_0417100 501 LVEGGQK|SG 0.059 . PcyM_0417100 522 DLSIEQK|NS 0.071 . PcyM_0417100 546 DYCDWTK|DS 0.069 . PcyM_0417100 554 SSSCMAK|IE 0.074 . PcyM_0417100 572 SWLFASK|VH 0.058 . PcyM_0417100 579 VHLETIK|CM 0.058 . PcyM_0417100 582 ETIKCMK|GY 0.073 . PcyM_0417100 600 VANCSSK|EA 0.075 . PcyM_0417100 603 CSSKEAK|DK 0.137 . PcyM_0417100 605 SKEAKDK|CQ 0.073 . PcyM_0417100 623 NILEGTK|FL 0.058 . PcyM_0417100 636 DLPYSYK|EV 0.080 . PcyM_0417100 646 NVCPEPK|SH 0.084 . PcyM_0417100 650 EPKSHWK|NL 0.071 . PcyM_0417100 657 NLWENVK|LL 0.062 . PcyM_0417100 661 NVKLLDK|QY 0.056 . PcyM_0417100 671 PNSVSTK|GY 0.100 . PcyM_0417100 682 YQSDHFK|GN 0.090 . PcyM_0417100 690 NMDAFIK|LV 0.067 . PcyM_0417100 693 AFIKLVK|SE 0.064 . PcyM_0417100 699 KSEVMNK|GS 0.063 . PcyM_0417100 707 SVIAYVK|AD 0.061 . PcyM_0417100 719 GYDLNGK|KV 0.057 . PcyM_0417100 720 YDLNGKK|VL 0.078 . PcyM_0417100 749 IHGEGVK|KS 0.060 . PcyM_0417100 750 HGEGVKK|SY 0.135 . PcyM_0417100 761 LQNSWGK|HW 0.096 . PcyM_0417100 766 GKHWGDK|GK 0.084 . PcyM_0417100 768 HWGDKGK|FK 0.077 . PcyM_0417100 770 GDKGKFK|VD 0.093 . PcyM_0417100 802 PFQSPAK|DT 0.075 . PcyM_0417100 812 LYSYQLK|SS 0.084 . PcyM_0417100 819 SSPDFYK|NL 0.068 . PcyM_0417100 830 NAVGEAK|GS 0.071 . PcyM_0417100 877 GVSTDTK|AP 0.085 . PcyM_0417100 959 GGAENAK|MS 0.077 . PcyM_0417100 968 HIIHVLK|HI 0.070 . PcyM_0417100 971 HVLKHIK|QT 0.071 . PcyM_0417100 974 KHIKQTK|MV 0.094 . PcyM_0417100 978 QTKMVTR|MV 0.165 . PcyM_0417100 995 GDHSCSR|TQ 0.079 . PcyM_0417100 1003 QASTVEK|LD 0.073 . PcyM_0417100 1009 KLDECIR|FC 0.079 . PcyM_0417100 1020 NLYLCER|TV 0.117 . PcyM_0417100 1030 AGYCLTK|LR 0.060 . PcyM_0417100 1032 YCLTKLR|NA 0.111 . ____________________________^_________________

  • Fasta :-

    >PcyM_0417100 ATGAAGTCTAGTTTTCTCTTGCTGCTCGCTTTAGGCGCCGCTTACGGCAGCAATGTAGCG ATGTGCACAACTGTGCCGGAGTCGTCATCTGGAGGATCCGGTGGTTCGCAATCCACTTCT AGTGCCTCTGGGACAGTAACGGAAAATGGAGGATCGTCTGGGGCAGGGTTGCAATCCGCA TCATCTGGAAATGAACAAGGCGTTACTCAACCCACGAATCCGTCACCGCCTGTATCCCAG GCACCAAATTCTGCAGAATCAAATCCTTCACAACCGGTGCAAACACCAGATCAACATGCG GATGTACCCCCTAGCCAGAGCTCCACCACACCCACTGCCCAGGGAATCGCTTCTGCCAGT TCCTCAGGAAATACGAATGGACAGGGTGGAGCGACTCAACTTCAAACCAGCACCAAGAAA GCCGAGCTGCAGTCCGCACTGCTAAAAAACTTCACGGGGGTGAAGGTCACAGGTCCCTGC GACACAGAGGTAGGACTGTTCCTCATTCCTCACATGTACATTTCTGTGAAGGCGGCAAAG GACATCATAGAATTGTCTACCAAGTTCCCCAACTCGGACAACACGATAATCCAATTTACA AAGGGAGGCGAAACGTTGATTAACAAGTGTGAAGGGAACCCAGAAAAGACGTTTATGTTT ATAGTGTATCTGGAGGACAACATACTGACTCTTAAGTGGATCGTCTATCCGCAGAGTGAG GATAAGAACAAAGCTGACGTGAGGAAGTATCGATTGCCGAACCTGGAAAGACCTATCACC TCAATCCAAGTCCATTCAGTCATGGTCCAAGAGGACACCGTTATTTATACGAGCAAAGAT TATTCAATAAAGAATGACATTCCAGGTGAGTCGCGTGAATTGGGTCCAACAGATGGGTGC TCACCTGAGCAAAACTGCCAACAAACTATGAGTGCTTGCTTCTTAAGTGGAAACACAGAC ATAGAAAGCTGCTACACTTGCAATTTGCTAATCCATAATAATGACACAAATGACAAGTGC TTCGACTACGTATCGGCGGATTTTAAAAAGGAATTTCTTGACATTAAAGTGAAGGGACAG GACGATGAGGAGTCGAGCGAGTATAAACTTGCGCAGGTCATCAATGAGGTGTTGAATGGA ATTTACAAAACAGACCCTGAGGGAAACAAAGAGCTAATAACATCAGAAGAGTTAGACGAA AATGTGAAGAAGCACATAGGTAACTATTGCCAAGTTTTAAAAGAAATGGATATCAGCGGT ACTATGGAAGTACATCAGATGGGAAACGAGATGGACGTCTTCAAAAACCTCGTCCAATTG CTACAAAAACACGGGGAGGAAAAAAACTCAACGCTGGAATGGAAGCTACAGAACCCAGCC CTCTGTCTCAAAAATGTTAATGACTGGGTGGTGAATAAAAAGGGATTAGTGTTGCCTCTT TTGCAAAATGGTGGTAGCGATATCTACTTTGGCGAGAGTAACCTCGTGGAAGGTGGACAA AAAAGTGGTCTCTCAACCTACCAGGTAGGAGATGACGGAATTATCGATTTGTCCATCGAG CAAAAAAATTCACACACCTCATCCACTCCGTTTACCAATCATATGTTTTGCAATGCGGAC TACTGCGATTGGACGAAGGATTCAAGCAGTTGCATGGCGAAGATTGAGGCCGGGGACCAG GGAGACTGCGCCACTTCTTGGCTGTTCGCCTCGAAGGTGCACCTAGAAACGATCAAATGC ATGAAGGGCTACGATCATATTGCTAGTTCTGCTCTCTACGTGGCTAACTGTTCCAGTAAA GAAGCGAAGGACAAGTGTCAAGCACCGTCGAATCCGCTAGAATTTTTGAACATCCTGGAG GGGACAAAATTTTTGCCAGCCGAATCGGACCTCCCATACTCTTACAAAGAGGTGAATAAC GTCTGTCCTGAGCCAAAGAGTCATTGGAAAAACCTTTGGGAAAATGTGAAGCTCCTAGAC AAGCAGTACCAACCCAACTCGGTGAGCACCAAGGGGTACATCGCCTACCAGAGTGACCAC TTCAAGGGCAACATGGATGCTTTTATTAAATTGGTAAAATCAGAAGTGATGAACAAAGGG TCCGTTATCGCCTACGTGAAGGCAGACGAACTCATGGGTTATGACCTAAATGGGAAGAAG GTGCTCTCTCTGTGTGGAGGTGAAACGCCAGACCTCGCTGTGAACATAATAGGTTATGGT AACTACATACATGGGGAGGGGGTGAAAAAGTCCTACTGGTTGCTACAAAACAGTTGGGGC AAGCACTGGGGAGACAAAGGCAAGTTTAAGGTCGACATGGATGGCCTGCCTGGATGTCAG CACAACTTCATCCACACCGCTGCTGTGTTCAACCTAGACGTGCCCCCCTTCCAGTCTCCG GCGAAGGACACAGAATTGTACAGCTACCAGTTGAAGAGCTCCCCCGATTTTTACAAGAAT CTGTATTATAACGCAGTGGGTGAAGCAAAGGGCAGCGCGCCGAGTCAAGCCGTTCACGGG CAGGACGCTCCTGAGGAAACAGCGGTGGGAGGAGGAGAAAATTCTGTATCGACAGTTCAA GGACAGCAACCTCAGCCACAAGTGCCGTCCGGAGTGAGCACAGATACGAAAGCACCAGAA GGGGCAGATAACACAGTTTCCACGAGTGAAATCAGCGTGGGACCTTCACAACAAGCGCAA GCTCCCCAATCCCCAGGAGAAGGACAAGTTGTTTCCACCCAACAGCAGCCGGGGGGTTCC ACGCCAGCGCCCGAACCATCAGCACCACAACCAGCACAACAGGTAGATGCGTCCACTCCA GTCGCTACAGTCACACCAGGGGGGGCGAACCCCAATGGAGGAGCGGAAAACGCGAAAATG TCCCACATTATTCACGTTTTGAAACACATTAAGCAGACCAAAATGGTGACGAGAATGGTC ACGTACGAGGGCGAGTACGAATTGGGAGACCACTCCTGTTCACGAACCCAAGCATCAACT GTGGAGAAGCTGGACGAGTGCATACGTTTTTGCAATGAAAATTTGTACTTGTGTGAAAGG ACTGTTTCAGCAGGGTATTGTTTAACCAAGCTGCGAAATGCGAACGACTGCATTTTCTGT TTCGTGTGA
  • Download Fasta

  • Fasta :-

    MKSSFLLLLALGAAYGSNVAMCTTVPESSSGGSGGSQSTSSASGTVTENGGSSGAGLQSA SSGNEQGVTQPTNPSPPVSQAPNSAESNPSQPVQTPDQHADVPPSQSSTTPTAQGIASAS SSGNTNGQGGATQLQTSTKKAELQSALLKNFTGVKVTGPCDTEVGLFLIPHMYISVKAAK DIIELSTKFPNSDNTIIQFTKGGETLINKCEGNPEKTFMFIVYLEDNILTLKWIVYPQSE DKNKADVRKYRLPNLERPITSIQVHSVMVQEDTVIYTSKDYSIKNDIPGESRELGPTDGC SPEQNCQQTMSACFLSGNTDIESCYTCNLLIHNNDTNDKCFDYVSADFKKEFLDIKVKGQ DDEESSEYKLAQVINEVLNGIYKTDPEGNKELITSEELDENVKKHIGNYCQVLKEMDISG TMEVHQMGNEMDVFKNLVQLLQKHGEEKNSTLEWKLQNPALCLKNVNDWVVNKKGLVLPL LQNGGSDIYFGESNLVEGGQKSGLSTYQVGDDGIIDLSIEQKNSHTSSTPFTNHMFCNAD YCDWTKDSSSCMAKIEAGDQGDCATSWLFASKVHLETIKCMKGYDHIASSALYVANCSSK EAKDKCQAPSNPLEFLNILEGTKFLPAESDLPYSYKEVNNVCPEPKSHWKNLWENVKLLD KQYQPNSVSTKGYIAYQSDHFKGNMDAFIKLVKSEVMNKGSVIAYVKADELMGYDLNGKK VLSLCGGETPDLAVNIIGYGNYIHGEGVKKSYWLLQNSWGKHWGDKGKFKVDMDGLPGCQ HNFIHTAAVFNLDVPPFQSPAKDTELYSYQLKSSPDFYKNLYYNAVGEAKGSAPSQAVHG QDAPEETAVGGGENSVSTVQGQQPQPQVPSGVSTDTKAPEGADNTVSTSEISVGPSQQAQ APQSPGEGQVVSTQQQPGGSTPAPEPSAPQPAQQVDASTPVATVTPGGANPNGGAENAKM SHIIHVLKHIKQTKMVTRMVTYEGEYELGDHSCSRTQASTVEKLDECIRFCNENLYLCER TVSAGYCLTKLRNANDCIFCFV

  • title: active site
  • coordinates: Q560,S566,L732,N757
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0417100137 SQLQTSTKKA0.997unspPcyM_0417100137 SQLQTSTKKA0.997unspPcyM_0417100137 SQLQTSTKKA0.997unspPcyM_0417100282 SSKDYSIKND0.996unspPcyM_0417100904 SQAPQSPGEG0.995unspPcyM_041710028 STVPESSSGG0.99unspPcyM_041710084 SQAPNSAESN0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India