PcyM_0507100 | SPRY domain, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0507100OTHER0.9999530.0000420.000004
No Results

  • Fasta :-

    >PcyM_0507100 MTSLNNVEDEEDKNAANAEMDSPKENGQVAVSTSNCNSDKDGVEKGQPFTQSGNEKNCAN SACTPTAATAIAGASFDKKRKAEAVEERYQMDRTLDGMSIAPSVDKMDLMEKATIGGLNK HAKTGDGGISCADSIQKSSKGVDRLDVDTYMHAHTHAHTHVDKCATNREFESDDAAQGKA ISGDAKEEQRGVNAGESSKTELAQSDASKEEKAKDKPNELARMKKEAKETHAQPEANNKK KESYKYFIDYSKYRSKNNVTFSTKYKDSCVNLSSDKLTCYGDKGWSSVFVNNGADIGKWY YEIKIEEPVQNFHFLGYKDKVIKVNPYIRVGFACRYMRYDYPIGTDKYSYCVNSKNGRIF NNSISYDCMEPIKVGDIIGCYLNLKNKNTYNFDPRSDKKLYEYLQNGILCDPKDPPMLKK NYGSSIFFSLNGQIKKNAFVDIYEGFYHPSVSLYMGASAKINLGPHFAYNHLNDYIPCVF MEPPIIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0507100.fa Sequence name : PcyM_0507100 Sequence length : 487 VALUES OF COMPUTED PARAMETERS Coef20 : 3.170 CoefTot : -0.034 ChDiff : -2 ZoneTo : 7 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.129 0.829 0.224 0.437 MesoH : -0.438 0.108 -0.424 0.251 MuHd_075 : 10.410 3.595 2.145 1.666 MuHd_095 : 21.521 18.745 7.859 5.322 MuHd_100 : 19.504 17.554 6.315 5.270 MuHd_105 : 13.977 12.363 3.514 4.067 Hmax_075 : -15.925 -5.950 -5.947 -0.779 Hmax_095 : -3.800 3.800 -2.671 1.780 Hmax_100 : -3.800 6.500 -2.671 2.600 Hmax_105 : -7.400 2.625 -4.251 1.592 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9331 0.0669 DFMC : 0.9341 0.0659
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 487 PcyM_0507100 MTSLNNVEDEEDKNAANAEMDSPKENGQVAVSTSNCNSDKDGVEKGQPFTQSGNEKNCANSACTPTAATAIAGASFDKKR 80 KAEAVEERYQMDRTLDGMSIAPSVDKMDLMEKATIGGLNKHAKTGDGGISCADSIQKSSKGVDRLDVDTYMHAHTHAHTH 160 VDKCATNREFESDDAAQGKAISGDAKEEQRGVNAGESSKTELAQSDASKEEKAKDKPNELARMKKEAKETHAQPEANNKK 240 KESYKYFIDYSKYRSKNNVTFSTKYKDSCVNLSSDKLTCYGDKGWSSVFVNNGADIGKWYYEIKIEEPVQNFHFLGYKDK 320 VIKVNPYIRVGFACRYMRYDYPIGTDKYSYCVNSKNGRIFNNSISYDCMEPIKVGDIIGCYLNLKNKNTYNFDPRSDKKL 400 YEYLQNGILCDPKDPPMLKKNYGSSIFFSLNGQIKKNAFVDIYEGFYHPSVSLYMGASAKINLGPHFAYNHLNDYIPCVF 480 MEPPIIL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0507100 13 VEDEEDK|NA 0.066 . PcyM_0507100 24 AEMDSPK|EN 0.091 . PcyM_0507100 40 SNCNSDK|DG 0.075 . PcyM_0507100 45 DKDGVEK|GQ 0.062 . PcyM_0507100 56 TQSGNEK|NC 0.074 . PcyM_0507100 78 AGASFDK|KR 0.061 . PcyM_0507100 79 GASFDKK|RK 0.118 . PcyM_0507100 80 ASFDKKR|KA 0.410 . PcyM_0507100 81 SFDKKRK|AE 0.087 . PcyM_0507100 88 AEAVEER|YQ 0.099 . PcyM_0507100 93 ERYQMDR|TL 0.092 . PcyM_0507100 106 IAPSVDK|MD 0.059 . PcyM_0507100 112 KMDLMEK|AT 0.067 . PcyM_0507100 120 TIGGLNK|HA 0.079 . PcyM_0507100 123 GLNKHAK|TG 0.101 . PcyM_0507100 137 CADSIQK|SS 0.067 . PcyM_0507100 140 SIQKSSK|GV 0.108 . PcyM_0507100 144 SSKGVDR|LD 0.092 . PcyM_0507100 163 AHTHVDK|CA 0.073 . PcyM_0507100 168 DKCATNR|EF 0.086 . PcyM_0507100 179 DDAAQGK|AI 0.083 . PcyM_0507100 186 AISGDAK|EE 0.073 . PcyM_0507100 190 DAKEEQR|GV 0.179 . PcyM_0507100 199 NAGESSK|TE 0.057 . PcyM_0507100 209 AQSDASK|EE 0.066 . PcyM_0507100 212 DASKEEK|AK 0.072 . PcyM_0507100 214 SKEEKAK|DK 0.086 . PcyM_0507100 216 EEKAKDK|PN 0.073 . PcyM_0507100 222 KPNELAR|MK 0.134 . PcyM_0507100 224 NELARMK|KE 0.059 . PcyM_0507100 225 ELARMKK|EA 0.395 . PcyM_0507100 228 RMKKEAK|ET 0.095 . PcyM_0507100 239 QPEANNK|KK 0.061 . PcyM_0507100 240 PEANNKK|KE 0.093 . PcyM_0507100 241 EANNKKK|ES 0.152 . PcyM_0507100 245 KKKESYK|YF 0.077 . PcyM_0507100 252 YFIDYSK|YR 0.066 . PcyM_0507100 254 IDYSKYR|SK 0.163 . PcyM_0507100 256 YSKYRSK|NN 0.058 . PcyM_0507100 264 NVTFSTK|YK 0.065 . PcyM_0507100 266 TFSTKYK|DS 0.104 . PcyM_0507100 276 VNLSSDK|LT 0.061 . PcyM_0507100 283 LTCYGDK|GW 0.070 . PcyM_0507100 298 NGADIGK|WY 0.067 . PcyM_0507100 304 KWYYEIK|IE 0.075 . PcyM_0507100 318 FHFLGYK|DK 0.060 . PcyM_0507100 320 FLGYKDK|VI 0.064 . PcyM_0507100 323 YKDKVIK|VN 0.062 . PcyM_0507100 329 KVNPYIR|VG 0.085 . PcyM_0507100 335 RVGFACR|YM 0.082 . PcyM_0507100 338 FACRYMR|YD 0.308 . PcyM_0507100 347 YPIGTDK|YS 0.064 . PcyM_0507100 355 SYCVNSK|NG 0.059 . PcyM_0507100 358 VNSKNGR|IF 0.102 . PcyM_0507100 373 DCMEPIK|VG 0.061 . PcyM_0507100 385 GCYLNLK|NK 0.058 . PcyM_0507100 387 YLNLKNK|NT 0.064 . PcyM_0507100 395 TYNFDPR|SD 0.132 . PcyM_0507100 398 FDPRSDK|KL 0.127 . PcyM_0507100 399 DPRSDKK|LY 0.110 . PcyM_0507100 413 GILCDPK|DP 0.059 . PcyM_0507100 419 KDPPMLK|KN 0.057 . PcyM_0507100 420 DPPMLKK|NY 0.132 . PcyM_0507100 435 SLNGQIK|KN 0.067 . PcyM_0507100 436 LNGQIKK|NA 0.104 . PcyM_0507100 460 YMGASAK|IN 0.059 . ____________________________^_________________

  • Fasta :-

    >PcyM_0507100 ATGACGAGTCTTAATAACGTCGAAGACGAAGAGGACAAAAATGCTGCAAATGCAGAGATG GATTCGCCAAAGGAGAATGGCCAAGTTGCAGTGAGCACCAGTAATTGCAATTCGGATAAA GATGGAGTCGAAAAGGGACAACCTTTTACTCAAAGTGGAAACGAAAAAAATTGTGCGAAC AGTGCATGCACACCTACCGCGGCTACGGCAATCGCTGGCGCTAGCTTTGATAAGAAAAGA AAAGCGGAAGCAGTGGAGGAACGATACCAAATGGACAGGACCCTTGACGGTATGAGCATT GCCCCCAGTGTTGATAAAATGGACTTGATGGAGAAGGCAACTATTGGTGGCCTGAACAAG CATGCGAAAACAGGCGATGGAGGCATCAGTTGTGCCGATTCCATCCAGAAGAGCAGCAAG GGGGTCGATAGGTTGGATGTGGACACGTACATGCATGCACATACTCATGCGCATACTCAT GTGGACAAGTGCGCCACGAACAGAGAGTTCGAAAGTGATGACGCTGCTCAGGGGAAAGCG ATCAGTGGGGATGCTAAAGAGGAACAAAGAGGAGTCAACGCAGGAGAGAGTAGCAAAACA GAACTAGCACAAAGTGACGCAAGTAAGGAGGAAAAGGCGAAAGACAAACCGAATGAACTT GCGAGGATGAAGAAGGAAGCAAAAGAAACACATGCACAACCAGAAGCGAATAACAAGAAA AAGGAAAGCTACAAATATTTTATTGATTATAGTAAATATAGAAGCAAAAATAATGTGACG TTCTCGACCAAGTATAAAGACAGCTGTGTGAATTTAAGCAGCGATAAGCTCACCTGTTAT GGAGACAAAGGATGGTCCAGTGTTTTCGTGAATAATGGGGCGGACATCGGAAAATGGTAC TACGAAATAAAAATTGAAGAACCTGTGCAAAATTTCCACTTCTTAGGTTATAAGGACAAA GTGATAAAGGTAAACCCATATATAAGAGTCGGTTTCGCTTGCAGATATATGAGGTATGAT TATCCCATAGGAACAGACAAATATAGCTACTGCGTCAATAGCAAAAATGGAAGAATTTTT AACAACTCCATAAGCTACGACTGCATGGAACCAATTAAAGTAGGTGATATCATTGGGTGC TACTTAAATTTAAAGAACAAAAATACGTACAACTTCGATCCAAGATCAGATAAAAAATTG TATGAATATTTGCAAAATGGTATTCTATGTGATCCCAAAGATCCACCCATGTTAAAGAAA AACTACGGTTCGTCTATTTTTTTCTCCCTAAATGGGCAAATAAAGAAAAACGCCTTTGTT GATATTTATGAAGGGTTTTATCATCCGTCTGTGAGTTTGTACATGGGTGCTTCGGCAAAA ATTAATTTGGGTCCTCATTTTGCGTATAACCATTTGAATGATTACATCCCGTGTGTGTTT ATGGAGCCACCGATTATTCTGTGA
  • Download Fasta

  • Fasta :-

    MTSLNNVEDEEDKNAANAEMDSPKENGQVAVSTSNCNSDKDGVEKGQPFTQSGNEKNCAN SACTPTAATAIAGASFDKKRKAEAVEERYQMDRTLDGMSIAPSVDKMDLMEKATIGGLNK HAKTGDGGISCADSIQKSSKGVDRLDVDTYMHAHTHAHTHVDKCATNREFESDDAAQGKA ISGDAKEEQRGVNAGESSKTELAQSDASKEEKAKDKPNELARMKKEAKETHAQPEANNKK KESYKYFIDYSKYRSKNNVTFSTKYKDSCVNLSSDKLTCYGDKGWSSVFVNNGADIGKWY YEIKIEEPVQNFHFLGYKDKVIKVNPYIRVGFACRYMRYDYPIGTDKYSYCVNSKNGRIF NNSISYDCMEPIKVGDIIGCYLNLKNKNTYNFDPRSDKKLYEYLQNGILCDPKDPPMLKK NYGSSIFFSLNGQIKKNAFVDIYEGFYHPSVSLYMGASAKINLGPHFAYNHLNDYIPCVF MEPPIIL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0507100208 SQSDASKEEK0.997unspPcyM_0507100208 SQSDASKEEK0.997unspPcyM_0507100208 SQSDASKEEK0.997unspPcyM_050710022 SAEMDSPKEN0.996unspPcyM_050710038 SSNCNSDKDG0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India