PcyM_0510100 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0510100OTHER0.9997490.0001930.000058
No Results

  • Fasta :-

    >PcyM_0510100 MFFLRHPRDKYEEEFLGPIFLHFNGKNYYRRDMIINNRRGEKLKCCFFTPFNYNENTPCV IYTHSSCSCQLEALDILHILLICECSIFSYDCSGCGLSDGYFSTSGWNESQDLFLILNHL RNVEHVKNFALWGKYSGAVSSIIVASLDANIKLLIVDSPYVSLTELYKTTFHLSAKGKAE IIFKNICLYFAKRKIKKKFHYDIENICPVFFIEDITIPTIYIISRNDKIVHPAHTLYLAY KQKSQQKIIYTCEKAAHAYESFSYDNKLTAAIRTVLFGAEKGEVQNMFSVYTYMNVFNGL MEKYAHEFCFIDSLIQKKLGKKNKIIDKVKRFICFKYQSKASLTSSSCFNQSTIDSIRDA STTGENDYMQYEPSKNGLCWKFKSVSGEQDERDNHGLSEEQDPREDHGLADEYEYPFRDV NDGCDVNDGCDDHNFMGGKDATENLLDASPLKGYDANKVPAFRSTFHAGEQSGQRRFNLM HMQSARSSLKSKKNTYKKSLTWDTKLQSAVTYSKEDCPFELLKS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0510100.fa Sequence name : PcyM_0510100 Sequence length : 524 VALUES OF COMPUTED PARAMETERS Coef20 : 3.257 CoefTot : -0.100 ChDiff : 1 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.112 1.824 0.381 0.644 MesoH : -0.059 0.535 -0.119 0.288 MuHd_075 : 30.143 10.509 5.672 5.472 MuHd_095 : 25.540 11.993 6.668 4.414 MuHd_100 : 18.557 7.005 4.737 3.044 MuHd_105 : 13.071 1.465 3.028 2.383 Hmax_075 : 2.100 2.600 -1.642 3.620 Hmax_095 : 0.900 3.000 -2.253 3.260 Hmax_100 : 0.900 1.400 -2.253 3.260 Hmax_105 : -2.100 -0.933 -2.811 1.980 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9667 0.0333 DFMC : 0.9834 0.0166
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 524 PcyM_0510100 MFFLRHPRDKYEEEFLGPIFLHFNGKNYYRRDMIINNRRGEKLKCCFFTPFNYNENTPCVIYTHSSCSCQLEALDILHIL 80 LICECSIFSYDCSGCGLSDGYFSTSGWNESQDLFLILNHLRNVEHVKNFALWGKYSGAVSSIIVASLDANIKLLIVDSPY 160 VSLTELYKTTFHLSAKGKAEIIFKNICLYFAKRKIKKKFHYDIENICPVFFIEDITIPTIYIISRNDKIVHPAHTLYLAY 240 KQKSQQKIIYTCEKAAHAYESFSYDNKLTAAIRTVLFGAEKGEVQNMFSVYTYMNVFNGLMEKYAHEFCFIDSLIQKKLG 320 KKNKIIDKVKRFICFKYQSKASLTSSSCFNQSTIDSIRDASTTGENDYMQYEPSKNGLCWKFKSVSGEQDERDNHGLSEE 400 QDPREDHGLADEYEYPFRDVNDGCDVNDGCDDHNFMGGKDATENLLDASPLKGYDANKVPAFRSTFHAGEQSGQRRFNLM 480 HMQSARSSLKSKKNTYKKSLTWDTKLQSAVTYSKEDCPFELLKS 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0510100 5 --MFFLR|HP 0.095 . PcyM_0510100 8 FFLRHPR|DK 0.339 . PcyM_0510100 10 LRHPRDK|YE 0.087 . PcyM_0510100 26 FLHFNGK|NY 0.065 . PcyM_0510100 30 NGKNYYR|RD 0.078 . PcyM_0510100 31 GKNYYRR|DM 0.220 . PcyM_0510100 38 DMIINNR|RG 0.072 . PcyM_0510100 39 MIINNRR|GE 0.100 . PcyM_0510100 42 NNRRGEK|LK 0.115 . PcyM_0510100 44 RRGEKLK|CC 0.071 . PcyM_0510100 121 LILNHLR|NV 0.115 . PcyM_0510100 127 RNVEHVK|NF 0.064 . PcyM_0510100 134 NFALWGK|YS 0.079 . PcyM_0510100 152 SLDANIK|LL 0.058 . PcyM_0510100 168 SLTELYK|TT 0.059 . PcyM_0510100 176 TFHLSAK|GK 0.075 . PcyM_0510100 178 HLSAKGK|AE 0.077 . PcyM_0510100 184 KAEIIFK|NI 0.059 . PcyM_0510100 192 ICLYFAK|RK 0.063 . PcyM_0510100 193 CLYFAKR|KI 0.207 . PcyM_0510100 194 LYFAKRK|IK 0.075 . PcyM_0510100 196 FAKRKIK|KK 0.127 . PcyM_0510100 197 AKRKIKK|KF 0.115 . PcyM_0510100 198 KRKIKKK|FH 0.217 . PcyM_0510100 225 TIYIISR|ND 0.096 . PcyM_0510100 228 IISRNDK|IV 0.296 . PcyM_0510100 241 TLYLAYK|QK 0.079 . PcyM_0510100 243 YLAYKQK|SQ 0.105 . PcyM_0510100 247 KQKSQQK|II 0.081 . PcyM_0510100 254 IIYTCEK|AA 0.082 . PcyM_0510100 267 SFSYDNK|LT 0.074 . PcyM_0510100 273 KLTAAIR|TV 0.086 . PcyM_0510100 281 VLFGAEK|GE 0.059 . PcyM_0510100 303 FNGLMEK|YA 0.068 . PcyM_0510100 317 IDSLIQK|KL 0.082 . PcyM_0510100 318 DSLIQKK|LG 0.072 . PcyM_0510100 321 IQKKLGK|KN 0.064 . PcyM_0510100 322 QKKLGKK|NK 0.071 . PcyM_0510100 324 KLGKKNK|II 0.100 . PcyM_0510100 328 KNKIIDK|VK 0.056 . PcyM_0510100 330 KIIDKVK|RF 0.060 . PcyM_0510100 331 IIDKVKR|FI 0.280 . PcyM_0510100 336 KRFICFK|YQ 0.078 . PcyM_0510100 340 CFKYQSK|AS 0.058 . PcyM_0510100 358 STIDSIR|DA 0.163 . PcyM_0510100 375 MQYEPSK|NG 0.056 . PcyM_0510100 381 KNGLCWK|FK 0.088 . PcyM_0510100 383 GLCWKFK|SV 0.206 . PcyM_0510100 392 SGEQDER|DN 0.083 . PcyM_0510100 404 SEEQDPR|ED 0.080 . PcyM_0510100 418 EYEYPFR|DV 0.159 . PcyM_0510100 439 HNFMGGK|DA 0.084 . PcyM_0510100 452 LDASPLK|GY 0.070 . PcyM_0510100 458 KGYDANK|VP 0.052 . PcyM_0510100 463 NKVPAFR|ST 0.178 . PcyM_0510100 475 GEQSGQR|RF 0.075 . PcyM_0510100 476 EQSGQRR|FN 0.183 . PcyM_0510100 486 MHMQSAR|SS 0.206 . PcyM_0510100 490 SARSSLK|SK 0.073 . PcyM_0510100 492 RSSLKSK|KN 0.075 . PcyM_0510100 493 SSLKSKK|NT 0.124 . PcyM_0510100 497 SKKNTYK|KS 0.065 . PcyM_0510100 498 KKNTYKK|SL 0.177 . PcyM_0510100 505 SLTWDTK|LQ 0.067 . PcyM_0510100 514 SAVTYSK|ED 0.060 . PcyM_0510100 523 CPFELLK|S- 0.080 . ____________________________^_________________

  • Fasta :-

    >PcyM_0510100 ATGTTCTTTTTGAGGCACCCGAGAGACAAATATGAAGAAGAATTTCTTGGACCCATTTTC CTTCACTTTAATGGAAAAAATTACTACAGGAGAGATATGATTATTAACAACCGACGAGGA GAGAAACTCAAGTGTTGCTTCTTCACTCCTTTTAACTACAATGAAAATACCCCTTGTGTT ATTTACACCCATTCGAGTTGTAGCTGTCAGCTGGAGGCCTTGGATATCCTGCACATATTG CTAATATGCGAGTGCTCTATTTTTTCCTATGATTGCTCAGGGTGTGGTTTGTCCGATGGT TACTTCTCTACAAGTGGTTGGAATGAATCCCAGGACCTGTTTTTGATTTTGAATCACTTG AGGAATGTAGAACACGTGAAGAACTTCGCCCTTTGGGGGAAGTACTCCGGTGCAGTCAGC TCCATCATTGTGGCGTCTCTGGACGCCAACATTAAGTTGCTGATCGTGGACTCCCCGTAC GTGTCCCTGACCGAGCTGTACAAAACCACGTTCCACCTGAGCGCCAAGGGAAAGGCAGAA ATCATTTTTAAAAACATCTGCCTCTACTTTGCTAAAAGAAAAATTAAAAAGAAATTCCAC TACGACATAGAAAACATTTGCCCCGTTTTCTTCATCGAAGATATAACCATCCCAACAATA TATATAATATCAAGAAATGATAAAATAGTGCACCCAGCCCATACCCTATACCTAGCATAC AAACAGAAAAGTCAACAGAAAATTATTTACACATGTGAAAAGGCAGCACATGCATATGAA TCATTTTCTTATGACAATAAATTAACGGCAGCCATACGGACGGTGTTATTTGGAGCAGAG AAAGGTGAGGTGCAAAATATGTTCAGTGTGTATACATACATGAACGTATTTAATGGGCTT ATGGAGAAATATGCTCACGAGTTTTGCTTTATCGATTCGTTAATTCAAAAAAAGTTGGGC AAGAAGAATAAAATTATTGACAAGGTTAAGCGCTTCATTTGTTTCAAATACCAGTCGAAG GCTTCCCTCACTTCATCCAGCTGCTTCAACCAATCTACAATCGATTCCATCCGTGACGCG AGTACGACAGGCGAAAATGACTACATGCAGTACGAGCCATCCAAGAATGGCCTGTGTTGG AAATTCAAAAGTGTATCAGGTGAGCAGGACGAACGAGACAATCACGGGCTGAGCGAAGAA CAGGACCCGCGGGAGGACCACGGGCTGGCGGACGAATATGAATACCCATTTCGCGATGTT AACGATGGTTGCGATGTTAACGATGGTTGCGATGATCACAATTTTATGGGTGGCAAGGAT GCAACAGAGAACCTGCTTGACGCATCTCCCCTCAAAGGCTACGATGCCAATAAGGTACCC GCGTTCAGGTCAACATTCCACGCAGGGGAACAATCGGGGCAAAGGCGGTTTAACTTAATG CACATGCAGAGCGCGCGCAGTTCCCTCAAATCAAAAAAGAACACGTACAAGAAGTCCCTA ACGTGGGACACCAAGTTACAGAGCGCTGTCACGTATTCCAAGGAGGACTGCCCCTTCGAG CTGCTAAAAAGTTAG
  • Download Fasta

  • Fasta :-

    MFFLRHPRDKYEEEFLGPIFLHFNGKNYYRRDMIINNRRGEKLKCCFFTPFNYNENTPCV IYTHSSCSCQLEALDILHILLICECSIFSYDCSGCGLSDGYFSTSGWNESQDLFLILNHL RNVEHVKNFALWGKYSGAVSSIIVASLDANIKLLIVDSPYVSLTELYKTTFHLSAKGKAE IIFKNICLYFAKRKIKKKFHYDIENICPVFFIEDITIPTIYIISRNDKIVHPAHTLYLAY KQKSQQKIIYTCEKAAHAYESFSYDNKLTAAIRTVLFGAEKGEVQNMFSVYTYMNVFNGL MEKYAHEFCFIDSLIQKKLGKKNKIIDKVKRFICFKYQSKASLTSSSCFNQSTIDSIRDA STTGENDYMQYEPSKNGLCWKFKSVSGEQDERDNHGLSEEQDPREDHGLADEYEYPFRDV NDGCDVNDGCDDHNFMGGKDATENLLDASPLKGYDANKVPAFRSTFHAGEQSGQRRFNLM HMQSARSSLKSKKNTYKKSLTWDTKLQSAVTYSKEDCPFELLKS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0510100398 SNHGLSEEQD0.992unspPcyM_0510100398 SNHGLSEEQD0.992unspPcyM_0510100398 SNHGLSEEQD0.992unspPcyM_0510100488 SSARSSLKSK0.995unspPcyM_0510100491 SSSLKSKKNT0.997unspPcyM_0510100513 SAVTYSKEDC0.991unspPcyM_0510100356 SSTIDSIRDA0.992unspPcyM_0510100386 SFKSVSGEQD0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India