PcyM_0516300 | BEM46-like protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_0516300SP0.4324680.5658620.001671CS pos: 23-24. LNG-YI. Pr: 0.8329
No Results

  • Fasta :-

    >PcyM_0516300 MKLLKFLWIPVVTVLLLVLVLNGYIYFNQDNLIFAKEKINPNKVRPYGSHFEDVYLDMDD GSRFNWFVKTKGHENKPVFLYYLGKGGYIEKYVKLFDMIVQRVDVSIFSCSNRGCGTNEG TPSEEQFYKDALVPLNYLKQKHTKQLFIFGNSMGGAVALETASRHQKDIYGVIVENPFLS IKKMSEQNYPFLNFFLLSFEILIRSKMDNTEKIKRIHVPLLINTSERDEMVPPEHSRILF ELCPSKYKFRYISKKGTHNNIIKVDDGSYHASLKKFVQTAINIRERNAEPQAVPPLPAAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0516300.fa Sequence name : PcyM_0516300 Sequence length : 300 VALUES OF COMPUTED PARAMETERS Coef20 : 4.748 CoefTot : -0.490 ChDiff : 9 ZoneTo : 29 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.041 2.612 0.348 0.871 MesoH : -0.775 0.185 -0.520 0.194 MuHd_075 : 10.890 15.690 4.445 3.617 MuHd_095 : 20.760 18.734 6.413 5.642 MuHd_100 : 19.187 15.847 6.452 4.826 MuHd_105 : 19.114 12.885 6.178 4.164 Hmax_075 : 17.325 28.350 4.996 8.050 Hmax_095 : 19.075 27.650 4.618 7.700 Hmax_100 : 19.000 27.800 4.655 7.700 Hmax_105 : 19.600 25.900 4.168 7.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8895 0.1105 DFMC : 0.9451 0.0549
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 300 PcyM_0516300 MKLLKFLWIPVVTVLLLVLVLNGYIYFNQDNLIFAKEKINPNKVRPYGSHFEDVYLDMDDGSRFNWFVKTKGHENKPVFL 80 YYLGKGGYIEKYVKLFDMIVQRVDVSIFSCSNRGCGTNEGTPSEEQFYKDALVPLNYLKQKHTKQLFIFGNSMGGAVALE 160 TASRHQKDIYGVIVENPFLSIKKMSEQNYPFLNFFLLSFEILIRSKMDNTEKIKRIHVPLLINTSERDEMVPPEHSRILF 240 ELCPSKYKFRYISKKGTHNNIIKVDDGSYHASLKKFVQTAINIRERNAEPQAVPPLPAAA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0516300 2 -----MK|LL 0.056 . PcyM_0516300 5 --MKLLK|FL 0.068 . PcyM_0516300 36 DNLIFAK|EK 0.060 . PcyM_0516300 38 LIFAKEK|IN 0.064 . PcyM_0516300 43 EKINPNK|VR 0.061 . PcyM_0516300 45 INPNKVR|PY 0.147 . PcyM_0516300 63 DMDDGSR|FN 0.071 . PcyM_0516300 69 RFNWFVK|TK 0.077 . PcyM_0516300 71 NWFVKTK|GH 0.074 . PcyM_0516300 76 TKGHENK|PV 0.097 . PcyM_0516300 85 FLYYLGK|GG 0.063 . PcyM_0516300 91 KGGYIEK|YV 0.069 . PcyM_0516300 94 YIEKYVK|LF 0.060 . PcyM_0516300 102 FDMIVQR|VD 0.078 . PcyM_0516300 113 IFSCSNR|GC 0.217 . PcyM_0516300 129 SEEQFYK|DA 0.083 . PcyM_0516300 139 VPLNYLK|QK 0.063 . PcyM_0516300 141 LNYLKQK|HT 0.075 . PcyM_0516300 144 LKQKHTK|QL 0.092 . PcyM_0516300 164 ALETASR|HQ 0.099 . PcyM_0516300 167 TASRHQK|DI 0.368 . PcyM_0516300 182 NPFLSIK|KM 0.064 . PcyM_0516300 183 PFLSIKK|MS 0.102 . PcyM_0516300 204 SFEILIR|SK 0.111 . PcyM_0516300 206 EILIRSK|MD 0.056 . PcyM_0516300 212 KMDNTEK|IK 0.061 . PcyM_0516300 214 DNTEKIK|RI 0.061 . PcyM_0516300 215 NTEKIKR|IH 0.126 . PcyM_0516300 227 LINTSER|DE 0.105 . PcyM_0516300 237 VPPEHSR|IL 0.096 . PcyM_0516300 246 FELCPSK|YK 0.059 . PcyM_0516300 248 LCPSKYK|FR 0.063 . PcyM_0516300 250 PSKYKFR|YI 0.209 . PcyM_0516300 254 KFRYISK|KG 0.058 . PcyM_0516300 255 FRYISKK|GT 0.159 . PcyM_0516300 263 THNNIIK|VD 0.075 . PcyM_0516300 274 SYHASLK|KF 0.060 . PcyM_0516300 275 YHASLKK|FV 0.164 . PcyM_0516300 284 QTAINIR|ER 0.079 . PcyM_0516300 286 AINIRER|NA 0.126 . ____________________________^_________________

  • Fasta :-

    >PcyM_0516300 ATGAAGTTACTCAAGTTTTTGTGGATCCCCGTGGTTACGGTCTTACTCCTCGTGTTGGTG TTGAATGGCTACATTTATTTCAACCAAGACAATCTTATCTTTGCAAAAGAAAAGATCAAT CCGAATAAAGTCCGTCCTTATGGCAGTCACTTCGAGGATGTATACCTAGATATGGACGAC GGAAGCAGATTTAACTGGTTTGTAAAAACGAAAGGTCACGAAAACAAACCTGTGTTCCTT TACTACCTCGGAAAGGGTGGATACATCGAGAAGTATGTCAAATTGTTCGACATGATTGTG CAAAGGGTGGACGTCAGCATATTCTCCTGCTCCAACAGGGGCTGCGGAACGAACGAAGGA ACTCCGTCTGAGGAGCAGTTTTACAAGGATGCCCTGGTGCCCCTCAACTACTTGAAGCAG AAACATACCAAGCAATTGTTCATTTTCGGAAACTCTATGGGAGGCGCAGTGGCCCTCGAA ACGGCATCGAGGCACCAAAAGGACATTTACGGTGTGATCGTAGAAAACCCATTTCTCAGC ATTAAGAAAATGTCGGAGCAGAATTACCCCTTTTTAAATTTCTTCCTCTTGAGTTTTGAA ATTTTGATTAGAAGCAAAATGGACAATACAGAGAAAATAAAAAGAATACACGTCCCTCTG TTGATTAACACATCGGAAAGGGACGAAATGGTCCCCCCTGAACACTCGAGGATATTATTT GAGCTCTGCCCGAGCAAGTACAAGTTTAGGTACATCTCGAAGAAAGGGACGCACAACAAC ATAATAAAGGTCGACGACGGTTCGTATCACGCTTCGTTAAAGAAGTTCGTCCAGACAGCA ATCAATATACGTGAGAGGAATGCAGAACCACAGGCAGTGCCACCCCTCCCAGCAGCGGCG TAG
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  • Fasta :-

    MKLLKFLWIPVVTVLLLVLVLNGYIYFNQDNLIFAKEKINPNKVRPYGSHFEDVYLDMDD GSRFNWFVKTKGHENKPVFLYYLGKGGYIEKYVKLFDMIVQRVDVSIFSCSNRGCGTNEG TPSEEQFYKDALVPLNYLKQKHTKQLFIFGNSMGGAVALETASRHQKDIYGVIVENPFLS IKKMSEQNYPFLNFFLLSFEILIRSKMDNTEKIKRIHVPLLINTSERDEMVPPEHSRILF ELCPSKYKFRYISKKGTHNNIIKVDDGSYHASLKKFVQTAINIRERNAEPQAVPPLPAAA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_051630055 YFEDVYLDMD0.991unspPcyM_0516300253 SFRYISKKGT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India