PcyM_0521800 | ubiquitin carboxyl-terminal hydrolase 13, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_0521800OTHER0.9992860.0004710.000242
No Results

  • Fasta :-

    >PcyM_0521800 MADIKSVVASISASIREPSKDDVIYLDECSVTGYKDIFEDGVFVDLVSFESFSLKCLKYN YNRAHQGSGQNPGDNTGRFYLNIKKKKKLLDKIEKSEIKNLTLNVEGGFKESKVYEYQFE YALYDLETNMYISLDQIEDERVKNICNSIISHKNEIKKESPNKWVNEIKESKYAKDLVQL PNITIKNENLECAVCKAKKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALKHYYESGK KYPLVVKLGTITKEGEADVFSYADDENDSVIDPYIDVHLKNLGINITNLNKTEVTTLEKE IKENQNINFSSILDKDTQVVCKEGKVGFLNLGNTCYMNCALQVFLSIKEISYRYIGNQLD FLLTLDRKNKTHYDMFIQYAKLCSMIFKEEYINKKKNYIKNFKEECEMRSVDVTYDSDVD EEKCVSINPSMFRACLNQKGNPFCNNNQQDIFEFLSYLLNELIENENVIFQRLLNGNNSI KRKINQLENIEQGGEIEKEEKFKKSNDIMSQADGANTQGDNQHKSEKSLFNLFTFEMEQT IVSGENDVSRSSFHNNILSLDIPLDNAVLKKLEGETSPTASSAPTASAPPSTSSPPTASA PPTASSPPHVTLLDCLNNFIKKDHIDEYYSEEKKTKMLAQKDIKFKSFPPYLFIHIKRFY ADENWSAKKINIPVQTDEYINLEFMRSEKRPVGGDSNSGYGEEGQGKNCVDGSHTGKKNS EEYIMQQHKDLFDSLLDLGFEKEKVLEAIRKVKVKNVNNCISYIYGEDSVELDLQEISQG TDVNSENLNSIVSMGVNKDVAMASLLINKNDLQKSIDYIFSNLDVLTETKCAAIVNRNKC EDGLANYELVASIVHMGSNANSGHYICYIKDDSQWYVYNDNKIGLVDTNKGKDTAYIHLY KRI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0521800.fa Sequence name : PcyM_0521800 Sequence length : 903 VALUES OF COMPUTED PARAMETERS Coef20 : 4.393 CoefTot : 0.655 ChDiff : -24 ZoneTo : 16 KR : 2 DE : 1 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.894 1.394 0.105 0.456 MesoH : -0.333 0.185 -0.359 0.140 MuHd_075 : 11.913 1.605 2.205 1.792 MuHd_095 : 16.996 17.642 6.440 5.230 MuHd_100 : 24.393 20.365 7.054 6.701 MuHd_105 : 26.822 19.573 6.364 7.016 Hmax_075 : 10.850 11.550 1.932 4.293 Hmax_095 : 5.900 17.600 1.933 5.620 Hmax_100 : 17.700 22.200 4.040 7.160 Hmax_105 : 16.012 18.725 3.431 6.107 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9836 0.0164 DFMC : 0.9816 0.0184
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 903 PcyM_0521800 MADIKSVVASISASIREPSKDDVIYLDECSVTGYKDIFEDGVFVDLVSFESFSLKCLKYNYNRAHQGSGQNPGDNTGRFY 80 LNIKKKKKLLDKIEKSEIKNLTLNVEGGFKESKVYEYQFEYALYDLETNMYISLDQIEDERVKNICNSIISHKNEIKKES 160 PNKWVNEIKESKYAKDLVQLPNITIKNENLECAVCKAKKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALKHYYESGK 240 KYPLVVKLGTITKEGEADVFSYADDENDSVIDPYIDVHLKNLGINITNLNKTEVTTLEKEIKENQNINFSSILDKDTQVV 320 CKEGKVGFLNLGNTCYMNCALQVFLSIKEISYRYIGNQLDFLLTLDRKNKTHYDMFIQYAKLCSMIFKEEYINKKKNYIK 400 NFKEECEMRSVDVTYDSDVDEEKCVSINPSMFRACLNQKGNPFCNNNQQDIFEFLSYLLNELIENENVIFQRLLNGNNSI 480 KRKINQLENIEQGGEIEKEEKFKKSNDIMSQADGANTQGDNQHKSEKSLFNLFTFEMEQTIVSGENDVSRSSFHNNILSL 560 DIPLDNAVLKKLEGETSPTASSAPTASAPPSTSSPPTASAPPTASSPPHVTLLDCLNNFIKKDHIDEYYSEEKKTKMLAQ 640 KDIKFKSFPPYLFIHIKRFYADENWSAKKINIPVQTDEYINLEFMRSEKRPVGGDSNSGYGEEGQGKNCVDGSHTGKKNS 720 EEYIMQQHKDLFDSLLDLGFEKEKVLEAIRKVKVKNVNNCISYIYGEDSVELDLQEISQGTDVNSENLNSIVSMGVNKDV 800 AMASLLINKNDLQKSIDYIFSNLDVLTETKCAAIVNRNKCEDGLANYELVASIVHMGSNANSGHYICYIKDDSQWYVYND 880 NKIGLVDTNKGKDTAYIHLYKRI 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ....................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0521800 5 --MADIK|SV 0.108 . PcyM_0521800 16 SISASIR|EP 0.104 . PcyM_0521800 20 SIREPSK|DD 0.070 . PcyM_0521800 35 CSVTGYK|DI 0.068 . PcyM_0521800 55 FESFSLK|CL 0.068 . PcyM_0521800 58 FSLKCLK|YN 0.064 . PcyM_0521800 63 LKYNYNR|AH 0.090 . PcyM_0521800 78 PGDNTGR|FY 0.085 . PcyM_0521800 84 RFYLNIK|KK 0.058 . PcyM_0521800 85 FYLNIKK|KK 0.063 . PcyM_0521800 86 YLNIKKK|KK 0.085 . PcyM_0521800 87 LNIKKKK|KL 0.125 . PcyM_0521800 88 NIKKKKK|LL 0.182 . PcyM_0521800 92 KKKLLDK|IE 0.060 . PcyM_0521800 95 LLDKIEK|SE 0.074 . PcyM_0521800 99 IEKSEIK|NL 0.061 . PcyM_0521800 110 NVEGGFK|ES 0.058 . PcyM_0521800 113 GGFKESK|VY 0.065 . PcyM_0521800 141 DQIEDER|VK 0.068 . PcyM_0521800 143 IEDERVK|NI 0.062 . PcyM_0521800 153 NSIISHK|NE 0.066 . PcyM_0521800 157 SHKNEIK|KE 0.065 . PcyM_0521800 158 HKNEIKK|ES 0.100 . PcyM_0521800 163 KKESPNK|WV 0.093 . PcyM_0521800 169 KWVNEIK|ES 0.063 . PcyM_0521800 172 NEIKESK|YA 0.070 . PcyM_0521800 175 KESKYAK|DL 0.105 . PcyM_0521800 186 LPNITIK|NE 0.062 . PcyM_0521800 196 LECAVCK|AK 0.069 . PcyM_0521800 198 CAVCKAK|KN 0.065 . PcyM_0521800 199 AVCKAKK|NI 0.100 . PcyM_0521800 214 GYIGCGR|KI 0.093 . PcyM_0521800 215 YIGCGRK|IF 0.077 . PcyM_0521800 233 EEGAALK|HY 0.062 . PcyM_0521800 240 HYYESGK|KY 0.062 . PcyM_0521800 241 YYESGKK|YP 0.071 . PcyM_0521800 247 KYPLVVK|LG 0.055 . PcyM_0521800 253 KLGTITK|EG 0.064 . PcyM_0521800 280 YIDVHLK|NL 0.071 . PcyM_0521800 291 NITNLNK|TE 0.053 . PcyM_0521800 299 EVTTLEK|EI 0.055 . PcyM_0521800 302 TLEKEIK|EN 0.071 . PcyM_0521800 315 FSSILDK|DT 0.092 . PcyM_0521800 322 DTQVVCK|EG 0.067 . PcyM_0521800 325 VVCKEGK|VG 0.059 . PcyM_0521800 348 QVFLSIK|EI 0.064 . PcyM_0521800 353 IKEISYR|YI 0.186 . PcyM_0521800 367 FLLTLDR|KN 0.077 . PcyM_0521800 368 LLTLDRK|NK 0.068 . PcyM_0521800 370 TLDRKNK|TH 0.152 . PcyM_0521800 381 MFIQYAK|LC 0.074 . PcyM_0521800 388 LCSMIFK|EE 0.067 . PcyM_0521800 394 KEEYINK|KK 0.061 . PcyM_0521800 395 EEYINKK|KN 0.087 . PcyM_0521800 396 EYINKKK|NY 0.101 . PcyM_0521800 400 KKKNYIK|NF 0.065 . PcyM_0521800 403 NYIKNFK|EE 0.059 . PcyM_0521800 409 KEECEMR|SV 0.216 . PcyM_0521800 423 SDVDEEK|CV 0.090 . PcyM_0521800 433 INPSMFR|AC 0.081 . PcyM_0521800 439 RACLNQK|GN 0.060 . PcyM_0521800 472 ENVIFQR|LL 0.089 . PcyM_0521800 481 NGNNSIK|RK 0.069 . PcyM_0521800 482 GNNSIKR|KI 0.271 . PcyM_0521800 483 NNSIKRK|IN 0.098 . PcyM_0521800 498 QGGEIEK|EE 0.053 . PcyM_0521800 501 EIEKEEK|FK 0.060 . PcyM_0521800 503 EKEEKFK|KS 0.082 . PcyM_0521800 504 KEEKFKK|SN 0.170 . PcyM_0521800 524 QGDNQHK|SE 0.072 . PcyM_0521800 527 NQHKSEK|SL 0.097 . PcyM_0521800 550 GENDVSR|SS 0.151 . PcyM_0521800 570 LDNAVLK|KL 0.076 . PcyM_0521800 571 DNAVLKK|LE 0.114 . PcyM_0521800 621 CLNNFIK|KD 0.070 . PcyM_0521800 622 LNNFIKK|DH 0.143 . PcyM_0521800 633 EYYSEEK|KT 0.052 . PcyM_0521800 634 YYSEEKK|TK 0.097 . PcyM_0521800 636 SEEKKTK|ML 0.078 . PcyM_0521800 641 TKMLAQK|DI 0.078 . PcyM_0521800 644 LAQKDIK|FK 0.063 . PcyM_0521800 646 QKDIKFK|SF 0.102 . PcyM_0521800 657 YLFIHIK|RF 0.073 . PcyM_0521800 658 LFIHIKR|FY 0.249 . PcyM_0521800 668 DENWSAK|KI 0.071 . PcyM_0521800 669 ENWSAKK|IN 0.114 . PcyM_0521800 686 INLEFMR|SE 0.108 . PcyM_0521800 689 EFMRSEK|RP 0.094 . PcyM_0521800 690 FMRSEKR|PV 0.254 . PcyM_0521800 707 GEEGQGK|NC 0.069 . PcyM_0521800 717 DGSHTGK|KN 0.078 . PcyM_0521800 718 GSHTGKK|NS 0.174 . PcyM_0521800 729 YIMQQHK|DL 0.090 . PcyM_0521800 742 LDLGFEK|EK 0.052 . PcyM_0521800 744 LGFEKEK|VL 0.070 . PcyM_0521800 750 KVLEAIR|KV 0.075 . PcyM_0521800 751 VLEAIRK|VK 0.072 . PcyM_0521800 753 EAIRKVK|VK 0.108 . PcyM_0521800 755 IRKVKVK|NV 0.108 . PcyM_0521800 798 VSMGVNK|DV 0.084 . PcyM_0521800 809 ASLLINK|ND 0.052 . PcyM_0521800 814 NKNDLQK|SI 0.104 . PcyM_0521800 830 DVLTETK|CA 0.061 . PcyM_0521800 837 CAAIVNR|NK 0.100 . PcyM_0521800 839 AIVNRNK|CE 0.059 . PcyM_0521800 870 HYICYIK|DD 0.067 . PcyM_0521800 882 YVYNDNK|IG 0.053 . PcyM_0521800 890 GLVDTNK|GK 0.073 . PcyM_0521800 892 VDTNKGK|DT 0.069 . PcyM_0521800 901 AYIHLYK|RI 0.065 . PcyM_0521800 902 YIHLYKR|I- 0.168 . ____________________________^_________________

  • Fasta :-

    >PcyM_0521800 ATGGCCGATATTAAAAGCGTTGTGGCCTCCATTTCGGCGAGCATCCGCGAGCCGTCGAAG GATGACGTTATATACCTGGACGAGTGCAGCGTGACCGGTTACAAGGACATCTTCGAGGAC GGCGTGTTCGTGGACCTAGTTTCCTTCGAGAGCTTCAGCCTGAAGTGCCTTAAGTACAAC TACAATCGAGCGCACCAAGGCAGCGGCCAGAACCCAGGAGACAACACAGGAAGGTTCTAT CTAAATATCAAGAAAAAAAAAAAATTACTCGACAAGATAGAAAAAAGCGAAATAAAAAAT CTGACTCTGAACGTGGAAGGAGGTTTCAAGGAGAGTAAGGTATACGAGTACCAGTTCGAA TATGCACTATACGACTTGGAGACAAACATGTACATTAGTTTAGATCAAATCGAAGACGAG CGTGTAAAAAATATATGCAACAGTATAATCAGTCACAAAAATGAGATAAAGAAGGAGAGT CCCAACAAATGGGTGAACGAAATAAAGGAAAGCAAGTACGCAAAGGATCTTGTACAGCTA CCAAATATTACAATAAAAAATGAAAATCTTGAATGTGCAGTTTGCAAAGCGAAGAAGAAT ATATGGTTGAACTTATCCGATGGGTACATAGGGTGTGGAAGAAAAATTTTTAATTATGGA GGGGGGTGTCTGAACAATGAAGAAGGAGCAGCATTAAAGCATTATTACGAGAGTGGAAAG AAATACCCCTTAGTTGTGAAACTAGGAACCATCACCAAGGAGGGAGAAGCAGATGTATTT TCCTACGCAGATGACGAAAATGACAGTGTAATAGATCCATACATAGATGTACATCTGAAA AATCTAGGAATTAATATAACAAATTTGAATAAAACAGAAGTTACCACTTTGGAGAAAGAA ATAAAGGAAAATCAAAACATAAATTTTTCTTCCATACTTGATAAGGATACGCAGGTTGTA TGTAAGGAGGGAAAGGTTGGCTTCCTCAACTTAGGAAATACATGCTACATGAATTGCGCC CTGCAAGTCTTCCTCTCCATAAAAGAGATCAGCTACAGGTATATAGGCAATCAGTTGGAC TTCCTACTAACCCTAGACAGGAAAAATAAAACGCACTACGATATGTTCATTCAGTATGCA AAACTCTGCTCCATGATTTTTAAAGAAGAATATATTAACAAGAAAAAAAATTATATAAAA AATTTTAAAGAAGAATGTGAGATGAGAAGTGTGGATGTAACTTACGATAGCGATGTAGAT GAAGAAAAATGTGTGAGTATCAATCCGTCTATGTTTCGAGCATGTCTAAATCAAAAGGGA AACCCTTTCTGTAATAACAACCAGCAGGACATCTTCGAGTTTTTAAGCTACCTTCTGAAT GAACTGATCGAAAATGAAAATGTTATTTTTCAGAGACTCCTAAACGGGAACAATTCCATT AAGAGGAAAATCAACCAGCTGGAGAATATCGAACAGGGAGGGGAAATCGAAAAGGAGGAG AAATTTAAGAAGAGCAACGATATCATGTCCCAAGCGGATGGTGCAAACACACAAGGGGAT AATCAACACAAAAGCGAAAAGTCCCTCTTCAACCTCTTCACCTTCGAAATGGAACAAACC ATTGTAAGTGGTGAGAATGACGTAAGTAGGAGCTCCTTCCATAATAACATCCTCTCGTTG GACATCCCCCTGGATAATGCTGTGTTGAAGAAATTGGAAGGAGAGACTTCCCCGACTGCT TCTTCTGCTCCGACTGCTTCTGCTCCGCCCAGTACTTCTTCCCCTCCCACTGCTTCTGCT CCCCCCACTGCTTCTTCCCCCCCTCATGTAACGCTACTAGACTGCCTGAACAATTTCATA AAAAAGGACCACATCGATGAATACTACAGTGAGGAGAAAAAAACGAAAATGTTGGCCCAG AAGGACATCAAATTTAAGAGCTTCCCACCGTACCTTTTTATTCACATTAAAAGATTTTAC GCGGATGAAAATTGGAGCGCAAAGAAGATCAACATTCCCGTTCAGACAGATGAGTACATT AACTTAGAGTTTATGCGATCGGAGAAGAGGCCTGTTGGGGGGGATAGCAATAGTGGGTAT GGGGAAGAAGGACAAGGAAAGAACTGCGTGGATGGTTCCCATACAGGGAAAAAAAACAGC GAGGAGTATATCATGCAGCAGCATAAGGATCTGTTCGACTCCCTTTTAGACCTCGGATTT GAAAAGGAAAAAGTTTTGGAGGCCATCAGAAAAGTGAAGGTCAAAAATGTGAACAACTGC ATCTCGTATATTTATGGAGAAGATTCGGTGGAACTGGACCTGCAGGAAATTAGCCAAGGA ACGGATGTCAACTCGGAAAATTTAAATTCCATTGTCAGCATGGGTGTGAACAAGGACGTG GCTATGGCTTCCCTCCTCATAAATAAAAACGACTTGCAAAAATCTATCGATTATATTTTC TCCAATTTGGACGTCCTCACGGAGACCAAGTGCGCCGCGATTGTGAACAGGAACAAGTGC GAGGACGGCTTGGCCAACTACGAACTAGTCGCTTCCATCGTGCACATGGGAAGCAACGCC AACTCGGGCCACTACATCTGCTACATAAAGGACGATTCTCAGTGGTACGTATACAACGAC AATAAGATTGGCCTGGTCGACACGAACAAGGGCAAGGACACGGCATATATCCATTTGTAC AAGAGGATCTGA
  • Download Fasta

  • Fasta :-

    MADIKSVVASISASIREPSKDDVIYLDECSVTGYKDIFEDGVFVDLVSFESFSLKCLKYN YNRAHQGSGQNPGDNTGRFYLNIKKKKKLLDKIEKSEIKNLTLNVEGGFKESKVYEYQFE YALYDLETNMYISLDQIEDERVKNICNSIISHKNEIKKESPNKWVNEIKESKYAKDLVQL PNITIKNENLECAVCKAKKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALKHYYESGK KYPLVVKLGTITKEGEADVFSYADDENDSVIDPYIDVHLKNLGINITNLNKTEVTTLEKE IKENQNINFSSILDKDTQVVCKEGKVGFLNLGNTCYMNCALQVFLSIKEISYRYIGNQLD FLLTLDRKNKTHYDMFIQYAKLCSMIFKEEYINKKKNYIKNFKEECEMRSVDVTYDSDVD EEKCVSINPSMFRACLNQKGNPFCNNNQQDIFEFLSYLLNELIENENVIFQRLLNGNNSI KRKINQLENIEQGGEIEKEEKFKKSNDIMSQADGANTQGDNQHKSEKSLFNLFTFEMEQT IVSGENDVSRSSFHNNILSLDIPLDNAVLKKLEGETSPTASSAPTASAPPSTSSPPTASA PPTASSPPHVTLLDCLNNFIKKDHIDEYYSEEKKTKMLAQKDIKFKSFPPYLFIHIKRFY ADENWSAKKINIPVQTDEYINLEFMRSEKRPVGGDSNSGYGEEGQGKNCVDGSHTGKKNS EEYIMQQHKDLFDSLLDLGFEKEKVLEAIRKVKVKNVNNCISYIYGEDSVELDLQEISQG TDVNSENLNSIVSMGVNKDVAMASLLINKNDLQKSIDYIFSNLDVLTETKCAAIVNRNKC EDGLANYELVASIVHMGSNANSGHYICYIKDDSQWYVYNDNKIGLVDTNKGKDTAYIHLY KRI

  • title: Active Site
  • coordinates: N330,C335,H864,D880
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0521800269 SDENDSVIDP0.996unspPcyM_0521800269 SDENDSVIDP0.996unspPcyM_0521800269 SDENDSVIDP0.996unspPcyM_0521800417 SVTYDSDVDE0.995unspPcyM_0521800552 SVSRSSFHNN0.993unspPcyM_052180014 SSISASIREP0.993unspPcyM_052180019 SIREPSKDDV0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India