PcyM_0602500 | enoyl-CoA hydratase-related protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0602500OTHER0.7239680.0163120.259720
No Results

  • Fasta :-

    >PcyM_0602500 MVAPHCCPVLLPHIVAPHCRSTLSLHTVSPQCRPTMRRLKCNHLVKDPHLKHLTTCANAY CRPYMPVKGRPTWSTDRKRIRTSIFKDDDIYMDPLQIHNEEPNKTNYLNRASPDECVYTR NNVGMNAVLINKKYMDLKCINQLYKELLNGEINFTKRFTFITSISNESFNYGFNLLDMLK IVEVYQKGKNNKHADVLKKILYNINELSYLIFSYRKPLIVYCNGSVRGSGGFIPFLANNS ASYFHSSYAYTNLKYSFLPYGGISYVLANLRGSIGFYLALTGQVIQSADLMWCGLTKRWL AEDCLELMELTSESQLEVSEQDANLLLEEHFLKVPKIYTLKCYEEIIHDHFKYPSLMQIM AKLDASRKRTHSDERVRLWAEKTYQQICSQPPIAAHLTFEILHLLRTHKMDLLKKAQVTK KLYNQMIQNSYKVVPTTKEEVSLAELKLTIDSELLIKALNIETNAIANFISCPDLLNGIT SYLVKDTDHSFKCTYLNNSLLETKKDIIHYFLFYKNDYEFTVHDRPDISFSSLSVLDRCN QPYGSRDRHFYAEQSKRWSDDYLKDQLNEINKLAL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0602500.fa Sequence name : PcyM_0602500 Sequence length : 575 VALUES OF COMPUTED PARAMETERS Coef20 : 3.614 CoefTot : -3.082 ChDiff : 11 ZoneTo : 75 KR : 10 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.194 1.318 0.146 0.532 MesoH : 0.349 0.437 -0.137 0.332 MuHd_075 : 46.514 26.966 11.261 9.734 MuHd_095 : 33.694 23.270 10.257 7.151 MuHd_100 : 33.867 23.519 10.189 7.584 MuHd_105 : 37.946 23.401 10.399 7.466 Hmax_075 : 1.000 9.917 -2.215 2.450 Hmax_095 : 15.400 14.700 3.707 2.503 Hmax_100 : 15.400 14.700 3.707 4.730 Hmax_105 : 13.800 14.933 3.342 4.590 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1946 0.8054 DFMC : 0.1267 0.8733 This protein is probably imported in mitochondria. f(Ser) = 0.0533 f(Arg) = 0.0800 CMi = 0.29304 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 575 PcyM_0602500 MVAPHCCPVLLPHIVAPHCRSTLSLHTVSPQCRPTMRRLKCNHLVKDPHLKHLTTCANAYCRPYMPVKGRPTWSTDRKRI 80 RTSIFKDDDIYMDPLQIHNEEPNKTNYLNRASPDECVYTRNNVGMNAVLINKKYMDLKCINQLYKELLNGEINFTKRFTF 160 ITSISNESFNYGFNLLDMLKIVEVYQKGKNNKHADVLKKILYNINELSYLIFSYRKPLIVYCNGSVRGSGGFIPFLANNS 240 ASYFHSSYAYTNLKYSFLPYGGISYVLANLRGSIGFYLALTGQVIQSADLMWCGLTKRWLAEDCLELMELTSESQLEVSE 320 QDANLLLEEHFLKVPKIYTLKCYEEIIHDHFKYPSLMQIMAKLDASRKRTHSDERVRLWAEKTYQQICSQPPIAAHLTFE 400 ILHLLRTHKMDLLKKAQVTKKLYNQMIQNSYKVVPTTKEEVSLAELKLTIDSELLIKALNIETNAIANFISCPDLLNGIT 480 SYLVKDTDHSFKCTYLNNSLLETKKDIIHYFLFYKNDYEFTVHDRPDISFSSLSVLDRCNQPYGSRDRHFYAEQSKRWSD 560 DYLKDQLNEINKLAL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0602500 20 IVAPHCR|ST 0.137 . PcyM_0602500 33 TVSPQCR|PT 0.124 . PcyM_0602500 37 QCRPTMR|RL 0.083 . PcyM_0602500 38 CRPTMRR|LK 0.127 . PcyM_0602500 40 PTMRRLK|CN 0.113 . PcyM_0602500 46 KCNHLVK|DP 0.073 . PcyM_0602500 51 VKDPHLK|HL 0.069 . PcyM_0602500 62 CANAYCR|PY 0.098 . PcyM_0602500 68 RPYMPVK|GR 0.062 . PcyM_0602500 70 YMPVKGR|PT 0.093 . PcyM_0602500 77 PTWSTDR|KR 0.061 . PcyM_0602500 78 TWSTDRK|RI 0.116 . PcyM_0602500 79 WSTDRKR|IR 0.152 . PcyM_0602500 81 TDRKRIR|TS 0.109 . PcyM_0602500 86 IRTSIFK|DD 0.074 . PcyM_0602500 104 HNEEPNK|TN 0.060 . PcyM_0602500 110 KTNYLNR|AS 0.104 . PcyM_0602500 120 DECVYTR|NN 0.076 . PcyM_0602500 132 NAVLINK|KY 0.054 . PcyM_0602500 133 AVLINKK|YM 0.077 . PcyM_0602500 138 KKYMDLK|CI 0.070 . PcyM_0602500 145 CINQLYK|EL 0.070 . PcyM_0602500 156 GEINFTK|RF 0.061 . PcyM_0602500 157 EINFTKR|FT 0.201 . PcyM_0602500 180 NLLDMLK|IV 0.072 . PcyM_0602500 187 IVEVYQK|GK 0.063 . PcyM_0602500 189 EVYQKGK|NN 0.064 . PcyM_0602500 192 QKGKNNK|HA 0.084 . PcyM_0602500 198 KHADVLK|KI 0.067 . PcyM_0602500 199 HADVLKK|IL 0.106 . PcyM_0602500 215 YLIFSYR|KP 0.077 . PcyM_0602500 216 LIFSYRK|PL 0.073 . PcyM_0602500 227 YCNGSVR|GS 0.127 . PcyM_0602500 254 YAYTNLK|YS 0.058 . PcyM_0602500 271 YVLANLR|GS 0.070 . PcyM_0602500 297 MWCGLTK|RW 0.061 . PcyM_0602500 298 WCGLTKR|WL 0.118 . PcyM_0602500 333 LEEHFLK|VP 0.054 . PcyM_0602500 336 HFLKVPK|IY 0.059 . PcyM_0602500 341 PKIYTLK|CY 0.073 . PcyM_0602500 352 IIHDHFK|YP 0.081 . PcyM_0602500 362 LMQIMAK|LD 0.064 . PcyM_0602500 367 AKLDASR|KR 0.074 . PcyM_0602500 368 KLDASRK|RT 0.082 . PcyM_0602500 369 LDASRKR|TH 0.258 . PcyM_0602500 375 RTHSDER|VR 0.087 . PcyM_0602500 377 HSDERVR|LW 0.085 . PcyM_0602500 382 VRLWAEK|TY 0.068 . PcyM_0602500 406 EILHLLR|TH 0.062 . PcyM_0602500 409 HLLRTHK|MD 0.099 . PcyM_0602500 414 HKMDLLK|KA 0.065 . PcyM_0602500 415 KMDLLKK|AQ 0.075 . PcyM_0602500 420 KKAQVTK|KL 0.079 . PcyM_0602500 421 KAQVTKK|LY 0.123 . PcyM_0602500 432 MIQNSYK|VV 0.077 . PcyM_0602500 438 KVVPTTK|EE 0.053 . PcyM_0602500 447 VSLAELK|LT 0.064 . PcyM_0602500 457 DSELLIK|AL 0.062 . PcyM_0602500 485 ITSYLVK|DT 0.106 . PcyM_0602500 492 DTDHSFK|CT 0.062 . PcyM_0602500 504 NSLLETK|KD 0.057 . PcyM_0602500 505 SLLETKK|DI 0.118 . PcyM_0602500 515 HYFLFYK|ND 0.058 . PcyM_0602500 525 EFTVHDR|PD 0.069 . PcyM_0602500 538 SLSVLDR|CN 0.117 . PcyM_0602500 546 NQPYGSR|DR 0.079 . PcyM_0602500 548 PYGSRDR|HF 0.088 . PcyM_0602500 556 FYAEQSK|RW 0.060 . PcyM_0602500 557 YAEQSKR|WS 0.302 . PcyM_0602500 564 WSDDYLK|DQ 0.059 . PcyM_0602500 572 QLNEINK|LA 0.063 . ____________________________^_________________

  • Fasta :-

    >PcyM_0602500 ATGGTTGCCCCGCATTGTTGCCCCGTATTGTTGCCCCACATTGTCGCCCCACACTGTCGC TCCACACTGTCGCTCCACACGGTCTCTCCACAATGCCGCCCCACAATGCGGCGCCTTAAG TGTAACCACCTGGTGAAGGACCCCCACCTTAAACACCTCACCACATGCGCCAATGCGTAC TGCCGCCCATATATGCCCGTCAAGGGACGCCCCACATGGAGCACAGACAGAAAGCGAATC CGAACGTCCATCTTCAAAGATGATGACATATACATGGACCCTCTCCAAATTCACAACGAA GAACCGAACAAAACAAACTACCTGAACAGAGCATCACCAGACGAGTGTGTATACACCCGG AACAACGTAGGAATGAACGCAGTCCTCATAAACAAAAAATACATGGACCTAAAGTGTATT AACCAGTTGTATAAGGAGCTACTAAATGGAGAGATCAATTTCACAAAAAGGTTTACCTTC ATAACATCGATCAGTAACGAGTCGTTTAATTACGGTTTCAATTTATTGGACATGCTCAAA ATCGTGGAAGTGTATCAAAAAGGGAAAAACAACAAGCATGCAGATGTTTTGAAAAAAATT CTGTACAACATTAATGAGTTAAGTTATCTCATCTTTTCATATAGGAAGCCACTCATAGTG TACTGTAACGGTAGCGTTCGAGGCTCCGGAGGGTTCATACCCTTCCTTGCTAATAACAGC GCTTCATATTTTCATTCCTCATATGCCTACACCAATTTGAAGTACTCCTTTTTGCCCTAT GGTGGCATCTCCTACGTGCTAGCCAATTTGAGAGGATCTATTGGATTCTACTTAGCCCTA ACAGGCCAGGTAATCCAATCTGCGGACCTTATGTGGTGCGGTTTGACAAAAAGGTGGCTA GCAGAAGACTGTCTAGAGCTAATGGAACTCACATCAGAATCGCAACTAGAGGTGTCCGAA CAAGATGCCAACCTCCTTTTGGAAGAACATTTTTTGAAAGTCCCAAAAATCTATACCTTA AAATGTTACGAAGAAATAATTCACGACCATTTTAAGTACCCCTCTCTGATGCAAATTATG GCTAAGCTAGATGCATCTAGGAAAAGAACCCATTCTGATGAACGGGTTCGCCTCTGGGCA GAAAAAACATACCAACAGATCTGTTCGCAGCCACCTATAGCGGCACATCTAACATTTGAA ATTCTCCACCTACTTAGAACCCACAAAATGGACCTACTCAAAAAAGCCCAAGTCACAAAA AAGCTATATAATCAGATGATACAAAATAGTTACAAGGTAGTTCCAACCACAAAGGAAGAA GTAAGCTTAGCTGAACTCAAGCTTACCATCGATTCGGAGCTCCTCATAAAAGCATTAAAT ATTGAAACCAATGCCATAGCGAATTTCATTTCCTGTCCGGATCTCCTTAATGGAATCACC TCCTACTTGGTTAAAGACACGGATCACTCCTTCAAATGTACCTACCTGAATAACTCCCTT CTTGAGACGAAGAAGGATATAATCCATTATTTCCTTTTTTACAAAAATGATTACGAGTTT ACTGTACATGACAGACCCGACATAAGTTTCTCCAGTTTGAGTGTCCTCGATCGATGTAAT CAGCCCTATGGTTCACGCGACCGACACTTTTACGCAGAGCAGAGCAAACGATGGAGCGAC GACTATCTGAAGGACCAACTGAACGAGATTAACAAACTCGCCCTATGA
  • Download Fasta

  • Fasta :-

    MVAPHCCPVLLPHIVAPHCRSTLSLHTVSPQCRPTMRRLKCNHLVKDPHLKHLTTCANAY CRPYMPVKGRPTWSTDRKRIRTSIFKDDDIYMDPLQIHNEEPNKTNYLNRASPDECVYTR NNVGMNAVLINKKYMDLKCINQLYKELLNGEINFTKRFTFITSISNESFNYGFNLLDMLK IVEVYQKGKNNKHADVLKKILYNINELSYLIFSYRKPLIVYCNGSVRGSGGFIPFLANNS ASYFHSSYAYTNLKYSFLPYGGISYVLANLRGSIGFYLALTGQVIQSADLMWCGLTKRWL AEDCLELMELTSESQLEVSEQDANLLLEEHFLKVPKIYTLKCYEEIIHDHFKYPSLMQIM AKLDASRKRTHSDERVRLWAEKTYQQICSQPPIAAHLTFEILHLLRTHKMDLLKKAQVTK KLYNQMIQNSYKVVPTTKEEVSLAELKLTIDSELLIKALNIETNAIANFISCPDLLNGIT SYLVKDTDHSFKCTYLNNSLLETKKDIIHYFLFYKNDYEFTVHDRPDISFSSLSVLDRCN QPYGSRDRHFYAEQSKRWSDDYLKDQLNEINKLAL

  • title: oxyanion hole (OAH) forming residues
  • coordinates: F173,G230
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0602500372 SKRTHSDERV0.998unspPcyM_0602500372 SKRTHSDERV0.998unspPcyM_0602500372 SKRTHSDERV0.998unspPcyM_0602500490 SDTDHSFKCT0.995unspPcyM_0602500112 SLNRASPDEC0.992unspPcyM_0602500366 SKLDASRKRT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India