PcyM_0705300 | ATP-dependent protease ATPase subunit ClpY, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_0705300OTHER0.9993170.0000330.000651
No Results

  • Fasta :-

    >PcyM_0705300 MKNLDAHKYIKLVNFLNKKKKYPQFNFKYVKGEDGCDLQLANYVNTKKGIIRNDALRYTN DSAVSKILRSNVTELGNESAVSSTQSKGVERKLFSSNGTKGKKNNSNLGRGSQTNEDLTI QIGYANGEENLRKGTIAPLTGCKMKQTGWRKVDILPHDDGLGQVSRHKKEDQVNSKVMRM NCNGASYEGVNPIERRSNLHRNDEMNKLDFLQKRESPRDGYNMEGGQIHTRGRITHLGVN HRGGRYTVSNGDEGSYETGEKNRDVNTIQTDEGTQRELSSEENFAKVKITKENIIIMDNL KEEGRKGKKTKKMTMTEEKENMDDDVEMVGTTERSDGQEKCFKVEGTQGGEETGGSTDGG KIDEVTGDKQKKLYGDNPNEQEKGKENENEKGSVNFQMKNAKANKKCLYPHEIVEYLNKY IIGQTEAKKVVANALRQRWRRIQVDEDMKKDIIPKNILMIGPTGVGKTEIARRISMFVDA PFIKVEATKFTEVGFHGKDVDQIIKDLVEIAVKRQKTKFEIEIREQAEETVENIILYSLL GNIKEEEKNIWRKYLKDGSLDDKTVSIDIPNYVNNNMFSNDSVENAVKEALSNHQNIKSV KIIHQNINKQNDKKTMTIREAKQKLLQLEIDSSMNQDVILKTAISSVEEEGIVFIDEIDK ICSKSNSSYNGPDASAEGVQRDLLPLIEGCVINTKYGNINTNYILFIASGAFQRVKPNDM LNELQGRLPVHVNLSSLTIKDFIEILTKTHNNLLQQNIALLKTEGIDLQFTDDAIETIAN AAHDMNFYVENIGVRRLHTIIEKIMEDINYDVYNYVNKTIVIDKEKVKKSLEGFIKQFDL KKYII
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0705300.fa Sequence name : PcyM_0705300 Sequence length : 845 VALUES OF COMPUTED PARAMETERS Coef20 : 3.513 CoefTot : -2.652 ChDiff : 3 ZoneTo : 32 KR : 9 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.629 1.041 -0.100 0.462 MesoH : -0.862 0.219 -0.436 0.178 MuHd_075 : 20.386 14.414 7.449 4.660 MuHd_095 : 19.132 16.310 7.311 4.606 MuHd_100 : 27.436 17.501 8.850 6.330 MuHd_105 : 32.264 22.201 11.580 7.332 Hmax_075 : -2.567 4.900 -2.905 2.660 Hmax_095 : -2.100 8.700 -3.095 2.740 Hmax_100 : -1.000 4.600 -3.237 2.440 Hmax_105 : -1.100 10.617 -1.771 2.800 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9085 0.0915 DFMC : 0.8784 0.1216
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 845 PcyM_0705300 MKNLDAHKYIKLVNFLNKKKKYPQFNFKYVKGEDGCDLQLANYVNTKKGIIRNDALRYTNDSAVSKILRSNVTELGNESA 80 VSSTQSKGVERKLFSSNGTKGKKNNSNLGRGSQTNEDLTIQIGYANGEENLRKGTIAPLTGCKMKQTGWRKVDILPHDDG 160 LGQVSRHKKEDQVNSKVMRMNCNGASYEGVNPIERRSNLHRNDEMNKLDFLQKRESPRDGYNMEGGQIHTRGRITHLGVN 240 HRGGRYTVSNGDEGSYETGEKNRDVNTIQTDEGTQRELSSEENFAKVKITKENIIIMDNLKEEGRKGKKTKKMTMTEEKE 320 NMDDDVEMVGTTERSDGQEKCFKVEGTQGGEETGGSTDGGKIDEVTGDKQKKLYGDNPNEQEKGKENENEKGSVNFQMKN 400 AKANKKCLYPHEIVEYLNKYIIGQTEAKKVVANALRQRWRRIQVDEDMKKDIIPKNILMIGPTGVGKTEIARRISMFVDA 480 PFIKVEATKFTEVGFHGKDVDQIIKDLVEIAVKRQKTKFEIEIREQAEETVENIILYSLLGNIKEEEKNIWRKYLKDGSL 560 DDKTVSIDIPNYVNNNMFSNDSVENAVKEALSNHQNIKSVKIIHQNINKQNDKKTMTIREAKQKLLQLEIDSSMNQDVIL 640 KTAISSVEEEGIVFIDEIDKICSKSNSSYNGPDASAEGVQRDLLPLIEGCVINTKYGNINTNYILFIASGAFQRVKPNDM 720 LNELQGRLPVHVNLSSLTIKDFIEILTKTHNNLLQQNIALLKTEGIDLQFTDDAIETIANAAHDMNFYVENIGVRRLHTI 800 IEKIMEDINYDVYNYVNKTIVIDKEKVKKSLEGFIKQFDLKKYII 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ............................................. 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0705300 2 -----MK|NL 0.070 . PcyM_0705300 8 KNLDAHK|YI 0.063 . PcyM_0705300 11 DAHKYIK|LV 0.069 . PcyM_0705300 18 LVNFLNK|KK 0.064 . PcyM_0705300 19 VNFLNKK|KK 0.088 . PcyM_0705300 20 NFLNKKK|KY 0.078 . PcyM_0705300 21 FLNKKKK|YP 0.137 . PcyM_0705300 28 YPQFNFK|YV 0.097 . PcyM_0705300 31 FNFKYVK|GE 0.068 . PcyM_0705300 47 ANYVNTK|KG 0.062 . PcyM_0705300 48 NYVNTKK|GI 0.091 . PcyM_0705300 52 TKKGIIR|ND 0.075 . PcyM_0705300 57 IRNDALR|YT 0.130 . PcyM_0705300 66 NDSAVSK|IL 0.074 . PcyM_0705300 69 AVSKILR|SN 0.152 . PcyM_0705300 87 VSSTQSK|GV 0.141 . PcyM_0705300 91 QSKGVER|KL 0.104 . PcyM_0705300 92 SKGVERK|LF 0.101 . PcyM_0705300 100 FSSNGTK|GK 0.061 . PcyM_0705300 102 SNGTKGK|KN 0.073 . PcyM_0705300 103 NGTKGKK|NN 0.091 . PcyM_0705300 110 NNSNLGR|GS 0.163 . PcyM_0705300 132 NGEENLR|KG 0.070 . PcyM_0705300 133 GEENLRK|GT 0.108 . PcyM_0705300 143 APLTGCK|MK 0.061 . PcyM_0705300 145 LTGCKMK|QT 0.086 . PcyM_0705300 150 MKQTGWR|KV 0.163 . PcyM_0705300 151 KQTGWRK|VD 0.061 . PcyM_0705300 166 GLGQVSR|HK 0.092 . PcyM_0705300 168 GQVSRHK|KE 0.064 . PcyM_0705300 169 QVSRHKK|ED 0.341 . PcyM_0705300 176 EDQVNSK|VM 0.059 . PcyM_0705300 179 VNSKVMR|MN 0.159 . PcyM_0705300 195 GVNPIER|RS 0.075 . PcyM_0705300 196 VNPIERR|SN 0.168 . PcyM_0705300 201 RRSNLHR|ND 0.130 . PcyM_0705300 207 RNDEMNK|LD 0.058 . PcyM_0705300 213 KLDFLQK|RE 0.059 . PcyM_0705300 214 LDFLQKR|ES 0.146 . PcyM_0705300 218 QKRESPR|DG 0.144 . PcyM_0705300 231 GGQIHTR|GR 0.102 . PcyM_0705300 233 QIHTRGR|IT 0.118 . PcyM_0705300 242 HLGVNHR|GG 0.090 . PcyM_0705300 245 VNHRGGR|YT 0.311 . PcyM_0705300 261 SYETGEK|NR 0.057 . PcyM_0705300 263 ETGEKNR|DV 0.243 . PcyM_0705300 276 TDEGTQR|EL 0.114 . PcyM_0705300 286 SEENFAK|VK 0.075 . PcyM_0705300 288 ENFAKVK|IT 0.066 . PcyM_0705300 291 AKVKITK|EN 0.072 . PcyM_0705300 301 IIMDNLK|EE 0.062 . PcyM_0705300 305 NLKEEGR|KG 0.076 . PcyM_0705300 306 LKEEGRK|GK 0.101 . PcyM_0705300 308 EEGRKGK|KT 0.208 . PcyM_0705300 309 EGRKGKK|TK 0.078 . PcyM_0705300 311 RKGKKTK|KM 0.083 . PcyM_0705300 312 KGKKTKK|MT 0.153 . PcyM_0705300 319 MTMTEEK|EN 0.064 . PcyM_0705300 334 MVGTTER|SD 0.148 . PcyM_0705300 340 RSDGQEK|CF 0.066 . PcyM_0705300 343 GQEKCFK|VE 0.071 . PcyM_0705300 361 GSTDGGK|ID 0.062 . PcyM_0705300 369 DEVTGDK|QK 0.054 . PcyM_0705300 371 VTGDKQK|KL 0.063 . PcyM_0705300 372 TGDKQKK|LY 0.147 . PcyM_0705300 383 NPNEQEK|GK 0.077 . PcyM_0705300 385 NEQEKGK|EN 0.078 . PcyM_0705300 391 KENENEK|GS 0.061 . PcyM_0705300 399 SVNFQMK|NA 0.083 . PcyM_0705300 402 FQMKNAK|AN 0.071 . PcyM_0705300 405 KNAKANK|KC 0.056 . PcyM_0705300 406 NAKANKK|CL 0.121 . PcyM_0705300 419 IVEYLNK|YI 0.070 . PcyM_0705300 428 IGQTEAK|KV 0.076 . PcyM_0705300 429 GQTEAKK|VV 0.120 . PcyM_0705300 436 VVANALR|QR 0.072 . PcyM_0705300 438 ANALRQR|WR 0.093 . PcyM_0705300 440 ALRQRWR|RI 0.117 . PcyM_0705300 441 LRQRWRR|IQ 0.498 . PcyM_0705300 449 QVDEDMK|KD 0.053 . PcyM_0705300 450 VDEDMKK|DI 0.121 . PcyM_0705300 455 KKDIIPK|NI 0.072 . PcyM_0705300 467 GPTGVGK|TE 0.062 . PcyM_0705300 472 GKTEIAR|RI 0.092 . PcyM_0705300 473 KTEIARR|IS 0.127 . PcyM_0705300 484 VDAPFIK|VE 0.061 . PcyM_0705300 489 IKVEATK|FT 0.103 . PcyM_0705300 498 EVGFHGK|DV 0.148 . PcyM_0705300 505 DVDQIIK|DL 0.057 . PcyM_0705300 513 LVEIAVK|RQ 0.057 . PcyM_0705300 514 VEIAVKR|QK 0.183 . PcyM_0705300 516 IAVKRQK|TK 0.067 . PcyM_0705300 518 VKRQKTK|FE 0.090 . PcyM_0705300 524 KFEIEIR|EQ 0.072 . PcyM_0705300 544 SLLGNIK|EE 0.059 . PcyM_0705300 548 NIKEEEK|NI 0.058 . PcyM_0705300 552 EEKNIWR|KY 0.071 . PcyM_0705300 553 EKNIWRK|YL 0.116 . PcyM_0705300 556 IWRKYLK|DG 0.075 . PcyM_0705300 563 DGSLDDK|TV 0.084 . PcyM_0705300 588 SVENAVK|EA 0.058 . PcyM_0705300 598 SNHQNIK|SV 0.148 . PcyM_0705300 601 QNIKSVK|II 0.083 . PcyM_0705300 609 IHQNINK|QN 0.075 . PcyM_0705300 613 INKQNDK|KT 0.071 . PcyM_0705300 614 NKQNDKK|TM 0.095 . PcyM_0705300 619 KKTMTIR|EA 0.138 . PcyM_0705300 622 MTIREAK|QK 0.121 . PcyM_0705300 624 IREAKQK|LL 0.076 . PcyM_0705300 641 NQDVILK|TA 0.061 . PcyM_0705300 660 FIDEIDK|IC 0.059 . PcyM_0705300 664 IDKICSK|SN 0.072 . PcyM_0705300 681 SAEGVQR|DL 0.110 . PcyM_0705300 695 GCVINTK|YG 0.062 . PcyM_0705300 714 ASGAFQR|VK 0.073 . PcyM_0705300 716 GAFQRVK|PN 0.064 . PcyM_0705300 727 LNELQGR|LP 0.076 . PcyM_0705300 740 LSSLTIK|DF 0.100 . PcyM_0705300 748 FIEILTK|TH 0.057 . PcyM_0705300 762 QNIALLK|TE 0.062 . PcyM_0705300 795 VENIGVR|RL 0.087 . PcyM_0705300 796 ENIGVRR|LH 0.134 . PcyM_0705300 803 LHTIIEK|IM 0.062 . PcyM_0705300 818 VYNYVNK|TI 0.062 . PcyM_0705300 824 KTIVIDK|EK 0.058 . PcyM_0705300 826 IVIDKEK|VK 0.059 . PcyM_0705300 828 IDKEKVK|KS 0.063 . PcyM_0705300 829 DKEKVKK|SL 0.232 . PcyM_0705300 836 SLEGFIK|QF 0.066 . PcyM_0705300 841 IKQFDLK|KY 0.067 . PcyM_0705300 842 KQFDLKK|YI 0.112 . ____________________________^_________________

  • Fasta :-

    >PcyM_0705300 ATGAAAAACCTCGATGCGCACAAGTACATTAAATTGGTGAATTTTCTAAACAAGAAGAAA AAGTACCCCCAGTTTAATTTTAAATATGTCAAAGGCGAAGACGGATGTGACCTTCAGCTA GCCAATTATGTAAATACAAAGAAAGGAATAATACGAAATGATGCCTTAAGATACACAAAT GACAGTGCAGTCTCGAAGATACTACGTTCCAATGTGACCGAGCTTGGAAATGAGTCGGCG GTTTCTTCCACGCAAAGCAAAGGGGTGGAAAGGAAACTCTTTTCATCGAATGGAACTAAA GGGAAGAAGAATAATAGCAACCTGGGCAGGGGTTCCCAAACGAATGAAGATTTAACGATA CAGATCGGTTATGCCAATGGGGAGGAGAACCTCCGAAAGGGTACCATTGCACCGTTAACA GGTTGCAAAATGAAACAGACAGGATGGAGAAAGGTAGATATACTACCACACGATGATGGA CTAGGCCAAGTTAGTCGACACAAGAAGGAAGACCAGGTCAATTCCAAAGTGATGCGAATG AATTGTAATGGAGCATCATACGAAGGTGTTAATCCGATTGAGAGGAGAAGCAATCTACAC AGAAATGACGAAATGAACAAATTAGATTTTTTGCAAAAGAGGGAATCCCCTCGAGATGGG TATAACATGGAAGGAGGACAAATACACACCAGGGGGAGAATCACCCATTTAGGGGTTAAC CATCGAGGGGGTCGTTACACCGTTAGTAATGGTGATGAAGGAAGCTACGAAACGGGGGAG AAGAACCGAGATGTCAATACCATCCAAACAGATGAAGGAACACAAAGAGAGTTAAGTAGC GAAGAAAATTTTGCCAAGGTGAAAATTACAAAGGAAAATATTATAATAATGGATAATTTG AAGGAAGAAGGACGAAAGGGAAAAAAAACGAAAAAAATGACCATGACGGAGGAGAAGGAA AATATGGATGACGATGTAGAGATGGTAGGGACCACCGAGAGAAGTGATGGGCAAGAAAAA TGCTTCAAGGTAGAAGGGACACAAGGGGGAGAAGAAACAGGTGGTAGTACTGATGGAGGA AAAATCGATGAAGTGACAGGAGATAAGCAGAAGAAATTATACGGTGATAATCCAAATGAG CAAGAAAAAGGAAAAGAAAATGAAAATGAAAAAGGTAGTGTAAATTTCCAAATGAAGAAT GCCAAGGCGAATAAGAAGTGCCTGTACCCACATGAAATAGTGGAGTATTTGAATAAATAT ATTATAGGACAAACAGAAGCAAAGAAAGTCGTAGCTAATGCATTGAGACAGAGATGGAGA AGGATACAAGTAGATGAAGACATGAAGAAAGATATCATTCCAAAGAATATATTAATGATA GGACCAACTGGAGTTGGCAAAACGGAGATAGCAAGAAGAATTTCCATGTTTGTGGATGCA CCATTTATCAAAGTGGAAGCGACCAAGTTTACTGAAGTAGGTTTTCACGGTAAAGACGTT GATCAAATTATTAAAGATTTAGTCGAAATAGCGGTGAAGAGACAAAAAACAAAATTCGAA ATTGAGATAAGGGAACAAGCAGAAGAAACGGTAGAAAATATTATTTTGTATTCTCTATTG GGAAATATAAAAGAGGAGGAGAAAAATATTTGGAGAAAATATTTAAAAGATGGCTCTCTA GATGATAAGACTGTCAGTATCGATATTCCCAACTATGTAAATAATAACATGTTTTCGAAC GACTCAGTGGAGAATGCAGTTAAGGAAGCTCTAAGCAATCACCAAAATATTAAGAGCGTC AAAATTATCCACCAAAATATTAACAAACAGAATGATAAAAAAACGATGACTATACGAGAA GCGAAGCAGAAACTGTTGCAGTTAGAAATCGACTCCTCGATGAATCAGGACGTTATTCTA AAAACAGCTATCAGCTCCGTAGAAGAAGAAGGAATTGTGTTCATTGACGAAATTGATAAA ATTTGTTCCAAATCGAACTCCTCATACAACGGACCTGATGCAAGCGCGGAGGGGGTTCAA AGAGATTTACTGCCCCTCATAGAAGGATGTGTAATTAATACCAAGTATGGAAATATCAAC ACGAACTATATTCTGTTCATCGCTTCGGGGGCATTCCAACGAGTGAAGCCGAATGACATG CTCAACGAGCTACAGGGAAGATTGCCTGTCCATGTGAACCTCTCCAGTTTGACCATAAAA GATTTTATAGAAATTTTAACCAAGACACATAATAATTTGCTGCAACAAAATATTGCCCTG CTGAAAACGGAAGGCATCGATCTGCAGTTTACCGATGATGCCATTGAAACCATTGCCAAT GCTGCACATGACATGAACTTTTACGTTGAGAATATCGGCGTGCGAAGACTGCATACCATC ATAGAGAAGATCATGGAGGACATAAACTACGACGTTTATAATTATGTGAACAAAACAATT GTCATCGACAAGGAGAAGGTGAAGAAGTCCCTCGAGGGGTTCATTAAGCAGTTCGACTTG AAGAAGTACATCATTTGA
  • Download Fasta

  • Fasta :-

    MKNLDAHKYIKLVNFLNKKKKYPQFNFKYVKGEDGCDLQLANYVNTKKGIIRNDALRYTN DSAVSKILRSNVTELGNESAVSSTQSKGVERKLFSSNGTKGKKNNSNLGRGSQTNEDLTI QIGYANGEENLRKGTIAPLTGCKMKQTGWRKVDILPHDDGLGQVSRHKKEDQVNSKVMRM NCNGASYEGVNPIERRSNLHRNDEMNKLDFLQKRESPRDGYNMEGGQIHTRGRITHLGVN HRGGRYTVSNGDEGSYETGEKNRDVNTIQTDEGTQRELSSEENFAKVKITKENIIIMDNL KEEGRKGKKTKKMTMTEEKENMDDDVEMVGTTERSDGQEKCFKVEGTQGGEETGGSTDGG KIDEVTGDKQKKLYGDNPNEQEKGKENENEKGSVNFQMKNAKANKKCLYPHEIVEYLNKY IIGQTEAKKVVANALRQRWRRIQVDEDMKKDIIPKNILMIGPTGVGKTEIARRISMFVDA PFIKVEATKFTEVGFHGKDVDQIIKDLVEIAVKRQKTKFEIEIREQAEETVENIILYSLL GNIKEEEKNIWRKYLKDGSLDDKTVSIDIPNYVNNNMFSNDSVENAVKEALSNHQNIKSV KIIHQNINKQNDKKTMTIREAKQKLLQLEIDSSMNQDVILKTAISSVEEEGIVFIDEIDK ICSKSNSSYNGPDASAEGVQRDLLPLIEGCVINTKYGNINTNYILFIASGAFQRVKPNDM LNELQGRLPVHVNLSSLTIKDFIEILTKTHNNLLQQNIALLKTEGIDLQFTDDAIETIAN AAHDMNFYVENIGVRRLHTIIEKIMEDINYDVYNYVNKTIVIDKEKVKKSLEGFIKQFDL KKYII

  • title: ATP binding site
  • coordinates: P462,T463,G464,V465,G466,K467,T468,E469
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0705300582 SFSNDSVENA0.992unspPcyM_0705300582 SFSNDSVENA0.992unspPcyM_0705300582 SFSNDSVENA0.992unspPcyM_0705300646 STAISSVEEE0.993unspPcyM_0705300216 SQKRESPRDG0.998unspPcyM_0705300279 SQRELSSEEN0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India