PcyM_0805100 | DnaJ protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0805100OTHER0.5915600.3946630.013777
No Results

  • Fasta :-

    >PcyM_0805100 MNSGRKFIINKCIFLIFSKISPMLCGAEKRKLHDEIVEHVKSSKLINYPVDKTCINLFYI SKEIDKLISARSAFVSGGDQKRSHITLQSCLNLYYFLITSAKLKKITFLHRKVLEYVEQR IATSLQIKGVESADEKYIPYSIHIKNEKSVSHLVAELSTDCAAYLKKINGVKIRYLTIDR NQIKIDEEWKQKHQCAFNRKKLKIPISKHNYEFILNGVTEPALREKVLTLLNSPYENKGI NRDVIKILRKRYDVATKLGYRNWVHYSMSHFTSEKGKYEKLRDFFNLVKGKVDRDYARVS ANMGKLLSSSAEGVSQPSDRYGLHQDRRELRRDRISPLRDKPTMHDWSYYYNKSVNKLDE YFVNTFFPHGHVWKNFIEIVSRIYNFSYEEVQEKGVTKKWPKGSLVYRIERRSGNHCIGA NTHLNESLVRSRVGESPRREVPSGDSLLGYMYIVPYIEITIKDYFRVPSMNCLSNTCLIS TGHVVVDYKFIGTMPIEKKLFSCSEILTLFHEFGHAYHLLLLSRRYGLYQFSNMPLDYAE FFSHMNEHLVNNFSVLHALSNKADNNSKINEDIFKSIKFDSSRLANIYTHAVIDYEIHDL NPYDFFANHLDDNRGEVAHDRAYGDDSLVPFYNLIGSYLPYKIGSSYSIHSTSFPYHFSC YYAGSVLSYLLAEMRVLMNISTADLSIKRNSSLVAFQKKFYAIVAQDFIGSSGWPGSSVI DCALANRNLLA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0805100.fa Sequence name : PcyM_0805100 Sequence length : 731 VALUES OF COMPUTED PARAMETERS Coef20 : 4.486 CoefTot : -0.504 ChDiff : 25 ZoneTo : 27 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.059 1.506 0.180 0.575 MesoH : 0.067 0.553 -0.212 0.303 MuHd_075 : 38.196 19.893 11.497 7.812 MuHd_095 : 26.157 27.092 9.684 7.685 MuHd_100 : 20.872 22.439 6.970 6.746 MuHd_105 : 21.267 14.430 3.562 5.311 Hmax_075 : 16.800 15.500 4.364 5.520 Hmax_095 : 21.000 27.650 6.747 8.391 Hmax_100 : 22.300 26.500 6.449 8.540 Hmax_105 : 11.667 19.200 2.830 6.660 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1832 0.8168 DFMC : 0.4493 0.5507 This protein is probably imported in mitochondria. f(Ser) = 0.1111 f(Arg) = 0.0370 CMi = 0.91185 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 731 PcyM_0805100 MNSGRKFIINKCIFLIFSKISPMLCGAEKRKLHDEIVEHVKSSKLINYPVDKTCINLFYISKEIDKLISARSAFVSGGDQ 80 KRSHITLQSCLNLYYFLITSAKLKKITFLHRKVLEYVEQRIATSLQIKGVESADEKYIPYSIHIKNEKSVSHLVAELSTD 160 CAAYLKKINGVKIRYLTIDRNQIKIDEEWKQKHQCAFNRKKLKIPISKHNYEFILNGVTEPALREKVLTLLNSPYENKGI 240 NRDVIKILRKRYDVATKLGYRNWVHYSMSHFTSEKGKYEKLRDFFNLVKGKVDRDYARVSANMGKLLSSSAEGVSQPSDR 320 YGLHQDRRELRRDRISPLRDKPTMHDWSYYYNKSVNKLDEYFVNTFFPHGHVWKNFIEIVSRIYNFSYEEVQEKGVTKKW 400 PKGSLVYRIERRSGNHCIGANTHLNESLVRSRVGESPRREVPSGDSLLGYMYIVPYIEITIKDYFRVPSMNCLSNTCLIS 480 TGHVVVDYKFIGTMPIEKKLFSCSEILTLFHEFGHAYHLLLLSRRYGLYQFSNMPLDYAEFFSHMNEHLVNNFSVLHALS 560 NKADNNSKINEDIFKSIKFDSSRLANIYTHAVIDYEIHDLNPYDFFANHLDDNRGEVAHDRAYGDDSLVPFYNLIGSYLP 640 YKIGSSYSIHSTSFPYHFSCYYAGSVLSYLLAEMRVLMNISTADLSIKRNSSLVAFQKKFYAIVAQDFIGSSGWPGSSVI 720 DCALANRNLLA 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ........... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0805100 5 --MNSGR|KF 0.091 . PcyM_0805100 6 -MNSGRK|FI 0.083 . PcyM_0805100 11 RKFIINK|CI 0.068 . PcyM_0805100 19 IFLIFSK|IS 0.052 . PcyM_0805100 29 MLCGAEK|RK 0.059 . PcyM_0805100 30 LCGAEKR|KL 0.254 . PcyM_0805100 31 CGAEKRK|LH 0.095 . PcyM_0805100 41 EIVEHVK|SS 0.069 . PcyM_0805100 44 EHVKSSK|LI 0.062 . PcyM_0805100 52 INYPVDK|TC 0.061 . PcyM_0805100 62 NLFYISK|EI 0.065 . PcyM_0805100 66 ISKEIDK|LI 0.061 . PcyM_0805100 71 DKLISAR|SA 0.220 . PcyM_0805100 81 VSGGDQK|RS 0.063 . PcyM_0805100 82 SGGDQKR|SH 0.324 . PcyM_0805100 102 FLITSAK|LK 0.058 . PcyM_0805100 104 ITSAKLK|KI 0.068 . PcyM_0805100 105 TSAKLKK|IT 0.120 . PcyM_0805100 111 KITFLHR|KV 0.103 . PcyM_0805100 112 ITFLHRK|VL 0.096 . PcyM_0805100 120 LEYVEQR|IA 0.089 . PcyM_0805100 128 ATSLQIK|GV 0.096 . PcyM_0805100 136 VESADEK|YI 0.071 . PcyM_0805100 145 PYSIHIK|NE 0.061 . PcyM_0805100 148 IHIKNEK|SV 0.114 . PcyM_0805100 166 DCAAYLK|KI 0.060 . PcyM_0805100 167 CAAYLKK|IN 0.127 . PcyM_0805100 172 KKINGVK|IR 0.056 . PcyM_0805100 174 INGVKIR|YL 0.153 . PcyM_0805100 180 RYLTIDR|NQ 0.067 . PcyM_0805100 184 IDRNQIK|ID 0.068 . PcyM_0805100 190 KIDEEWK|QK 0.064 . PcyM_0805100 192 DEEWKQK|HQ 0.062 . PcyM_0805100 199 HQCAFNR|KK 0.103 . PcyM_0805100 200 QCAFNRK|KL 0.077 . PcyM_0805100 201 CAFNRKK|LK 0.096 . PcyM_0805100 203 FNRKKLK|IP 0.069 . PcyM_0805100 208 LKIPISK|HN 0.065 . PcyM_0805100 224 VTEPALR|EK 0.062 . PcyM_0805100 226 EPALREK|VL 0.060 . PcyM_0805100 238 NSPYENK|GI 0.063 . PcyM_0805100 242 ENKGINR|DV 0.199 . PcyM_0805100 246 INRDVIK|IL 0.071 . PcyM_0805100 249 DVIKILR|KR 0.070 . PcyM_0805100 250 VIKILRK|RY 0.074 . PcyM_0805100 251 IKILRKR|YD 0.145 . PcyM_0805100 257 RYDVATK|LG 0.057 . PcyM_0805100 261 ATKLGYR|NW 0.070 . PcyM_0805100 275 SHFTSEK|GK 0.073 . PcyM_0805100 277 FTSEKGK|YE 0.070 . PcyM_0805100 280 EKGKYEK|LR 0.057 . PcyM_0805100 282 GKYEKLR|DF 0.160 . PcyM_0805100 289 DFFNLVK|GK 0.056 . PcyM_0805100 291 FNLVKGK|VD 0.062 . PcyM_0805100 294 VKGKVDR|DY 0.122 . PcyM_0805100 298 VDRDYAR|VS 0.087 . PcyM_0805100 305 VSANMGK|LL 0.073 . PcyM_0805100 320 VSQPSDR|YG 0.110 . PcyM_0805100 327 YGLHQDR|RE 0.062 . PcyM_0805100 328 GLHQDRR|EL 0.149 . PcyM_0805100 331 QDRRELR|RD 0.182 . PcyM_0805100 332 DRRELRR|DR 0.164 . PcyM_0805100 334 RELRRDR|IS 0.121 . PcyM_0805100 339 DRISPLR|DK 0.100 . PcyM_0805100 341 ISPLRDK|PT 0.058 . PcyM_0805100 353 WSYYYNK|SV 0.121 . PcyM_0805100 357 YNKSVNK|LD 0.064 . PcyM_0805100 374 PHGHVWK|NF 0.070 . PcyM_0805100 382 FIEIVSR|IY 0.077 . PcyM_0805100 394 YEEVQEK|GV 0.085 . PcyM_0805100 398 QEKGVTK|KW 0.066 . PcyM_0805100 399 EKGVTKK|WP 0.118 . PcyM_0805100 402 VTKKWPK|GS 0.062 . PcyM_0805100 408 KGSLVYR|IE 0.114 . PcyM_0805100 411 LVYRIER|RS 0.170 . PcyM_0805100 412 VYRIERR|SG 0.175 . PcyM_0805100 430 LNESLVR|SR 0.087 . PcyM_0805100 432 ESLVRSR|VG 0.071 . PcyM_0805100 438 RVGESPR|RE 0.090 . PcyM_0805100 439 VGESPRR|EV 0.129 . PcyM_0805100 462 YIEITIK|DY 0.075 . PcyM_0805100 466 TIKDYFR|VP 0.076 . PcyM_0805100 489 HVVVDYK|FI 0.081 . PcyM_0805100 498 GTMPIEK|KL 0.058 . PcyM_0805100 499 TMPIEKK|LF 0.112 . PcyM_0805100 524 HLLLLSR|RY 0.085 . PcyM_0805100 525 LLLLSRR|YG 0.115 . PcyM_0805100 562 LHALSNK|AD 0.063 . PcyM_0805100 568 KADNNSK|IN 0.074 . PcyM_0805100 575 INEDIFK|SI 0.070 . PcyM_0805100 578 DIFKSIK|FD 0.066 . PcyM_0805100 583 IKFDSSR|LA 0.111 . PcyM_0805100 614 NHLDDNR|GE 0.069 . PcyM_0805100 621 GEVAHDR|AY 0.100 . PcyM_0805100 642 GSYLPYK|IG 0.064 . PcyM_0805100 675 YLLAEMR|VL 0.073 . PcyM_0805100 688 TADLSIK|RN 0.062 . PcyM_0805100 689 ADLSIKR|NS 0.127 . PcyM_0805100 698 SLVAFQK|KF 0.076 . PcyM_0805100 699 LVAFQKK|FY 0.135 . PcyM_0805100 727 DCALANR|NL 0.077 . ____________________________^_________________

  • Fasta :-

    >PcyM_0805100 ATGAACTCAGGAAGGAAGTTCATTATAAATAAATGCATTTTTCTCATTTTTTCGAAAATA TCGCCTATGTTATGTGGGGCGGAAAAAAGAAAACTGCATGACGAAATTGTGGAGCACGTA AAGAGTTCCAAGCTGATCAACTATCCTGTAGACAAAACATGCATAAATTTATTTTACATA TCGAAAGAAATTGACAAGCTGATCAGTGCGCGAAGTGCATTCGTATCGGGGGGTGACCAG AAAAGAAGCCACATCACTCTGCAGAGCTGCTTAAATTTGTATTACTTCCTAATCACATCT GCAAAGTTGAAGAAGATCACTTTTTTGCACAGGAAAGTTCTTGAATATGTGGAGCAAAGA ATTGCCACGAGTCTACAAATCAAGGGGGTCGAAAGTGCGGATGAGAAATACATTCCGTAT AGTATCCACATAAAAAATGAGAAATCGGTTAGCCACTTGGTGGCCGAGCTGAGCACAGAC TGCGCTGCGTATTTGAAGAAAATCAACGGCGTTAAGATAAGATACCTAACAATAGACAGA AACCAAATAAAGATAGACGAAGAATGGAAGCAGAAACACCAGTGCGCATTTAACAGAAAG AAGCTAAAAATTCCGATAAGTAAGCACAACTATGAATTTATTTTAAACGGAGTAACAGAA CCGGCGTTAAGGGAAAAGGTGTTGACTCTTCTTAACAGCCCTTATGAAAATAAAGGCATA AATAGAGACGTAATAAAAATTCTGAGGAAGAGGTACGATGTAGCGACGAAGCTTGGGTAT AGAAACTGGGTACACTATTCAATGTCTCATTTCACAAGTGAGAAAGGGAAGTACGAAAAA TTAAGGGACTTCTTTAATTTAGTCAAGGGGAAGGTGGATAGAGATTATGCACGTGTGAGT GCTAACATGGGGAAGTTACTCAGTTCGTCAGCTGAGGGGGTCAGTCAGCCGAGCGATCGA TATGGCCTGCACCAGGACAGACGCGAATTGCGACGTGATAGAATCTCCCCTCTTCGTGAT AAACCCACCATGCACGACTGGAGCTACTACTACAACAAAAGTGTGAACAAGTTAGACGAA TATTTCGTGAATACCTTCTTCCCTCACGGGCACGTATGGAAGAACTTCATCGAAATAGTT TCGCGCATTTACAATTTCTCCTATGAGGAGGTGCAGGAGAAGGGTGTCACGAAGAAGTGG CCCAAGGGGAGTCTCGTGTATAGGATTGAGCGGAGGAGTGGTAACCATTGCATCGGTGCC AATACACACTTAAACGAATCACTAGTACGAAGTCGAGTTGGAGAGAGTCCCAGAAGGGAA GTCCCCTCCGGTGATAGTCTGCTAGGCTATATGTACATAGTACCCTACATAGAAATAACG ATTAAGGATTATTTTAGAGTCCCCTCAATGAACTGCCTATCGAACACCTGCCTGATATCT ACAGGGCATGTAGTGGTGGATTATAAATTTATTGGGACTATGCCAATAGAAAAAAAACTG TTCAGTTGTTCAGAAATTCTAACCCTATTTCATGAATTTGGACATGCTTATCATTTGTTA TTATTATCAAGGAGATATGGTTTATATCAGTTTTCGAACATGCCATTGGATTATGCGGAG TTTTTTTCTCACATGAATGAACACCTGGTGAATAACTTCAGTGTGTTACACGCTTTATCA AATAAGGCAGATAATAATTCCAAAATAAATGAAGACATATTCAAGTCGATTAAATTTGAC TCTTCTCGGTTGGCTAACATTTACACGCATGCAGTGATAGATTACGAGATCCATGATTTA AACCCTTACGATTTTTTTGCCAACCATTTGGATGACAATCGTGGTGAAGTTGCACATGAC CGTGCATATGGCGATGATTCGTTAGTCCCTTTTTACAACCTCATTGGAAGTTACCTTCCG TACAAAATTGGATCTAGCTATTCCATACACTCGACAAGCTTCCCGTATCATTTTTCTTGT TATTATGCGGGCTCTGTTTTGAGCTACTTATTGGCTGAGATGCGGGTCCTCATGAACATA TCGACTGCTGACTTGTCCATCAAGCGGAACAGTTCTCTGGTTGCTTTTCAGAAAAAGTTT TACGCCATTGTGGCACAGGATTTTATTGGCTCGTCCGGTTGGCCTGGCTCCTCCGTGATC GACTGCGCGCTGGCCAACAGGAATTTGCTGGCCTGA
  • Download Fasta

  • Fasta :-

    MNSGRKFIINKCIFLIFSKISPMLCGAEKRKLHDEIVEHVKSSKLINYPVDKTCINLFYI SKEIDKLISARSAFVSGGDQKRSHITLQSCLNLYYFLITSAKLKKITFLHRKVLEYVEQR IATSLQIKGVESADEKYIPYSIHIKNEKSVSHLVAELSTDCAAYLKKINGVKIRYLTIDR NQIKIDEEWKQKHQCAFNRKKLKIPISKHNYEFILNGVTEPALREKVLTLLNSPYENKGI NRDVIKILRKRYDVATKLGYRNWVHYSMSHFTSEKGKYEKLRDFFNLVKGKVDRDYARVS ANMGKLLSSSAEGVSQPSDRYGLHQDRRELRRDRISPLRDKPTMHDWSYYYNKSVNKLDE YFVNTFFPHGHVWKNFIEIVSRIYNFSYEEVQEKGVTKKWPKGSLVYRIERRSGNHCIGA NTHLNESLVRSRVGESPRREVPSGDSLLGYMYIVPYIEITIKDYFRVPSMNCLSNTCLIS TGHVVVDYKFIGTMPIEKKLFSCSEILTLFHEFGHAYHLLLLSRRYGLYQFSNMPLDYAE FFSHMNEHLVNNFSVLHALSNKADNNSKINEDIFKSIKFDSSRLANIYTHAVIDYEIHDL NPYDFFANHLDDNRGEVAHDRAYGDDSLVPFYNLIGSYLPYKIGSSYSIHSTSFPYHFSC YYAGSVLSYLLAEMRVLMNISTADLSIKRNSSLVAFQKKFYAIVAQDFIGSSGWPGSSVI DCALANRNLLA

  • title: Zn binding site
  • coordinates: H511,H515,E540
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0805100436 SRVGESPRRE0.997unspPcyM_0805100436 SRVGESPRRE0.997unspPcyM_0805100436 SRVGESPRRE0.997unspPcyM_0805100686 STADLSIKRN0.994unspPcyM_080510076 SSAFVSGGDQ0.995unspPcyM_0805100336 SRDRISPLRD0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India