PcyM_0816000 | methionine aminopeptidase 1b, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_0816000OTHER0.9997590.0001020.000140
No Results

  • Fasta :-

    >PcyM_0816000 MVHEKRECEVEDRDDEDRGDDHNQVNIKQNAENEDICNGCGKELAKKLSCPICLKKKIYS YFCTQECFKNSWKEHVEKVHEKWEKKEKEEKGNHHIQRVNNEEEEKKKKLMEIIKKKLSP EHFDPTNRKYWIYDRHLKNFVNFVFTGNLRPWPITEINAVPAHIERPDYAFTSIPESELK YKRKSDIYVNSQDEIEKIREACILGRKTLDYAHSLVAPGVTTDEIDKKVHKFIIEHNAYP STLNYYKFPKSCCTSVNEIVCHGIPDLRPLQNGDIINIDISVFLKGVHADLNETFFVGDV DQVSKEAKELVQTCYFSLMESIKKCKPGMLYKNIGNIIDSYVSKKGFSVVRTYSGHGVGK LFHSNPTIPHFKKNKAVGIMKAGHVFTIEPMINQGHYCDVLWPDKWTSATSDGKLSAQFE HTLLITDKGVEILTKRLTDSPSLGFDTRDDLYEV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0816000.fa Sequence name : PcyM_0816000 Sequence length : 454 VALUES OF COMPUTED PARAMETERS Coef20 : 2.618 CoefTot : -0.239 ChDiff : -2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.659 1.165 -0.006 0.501 MesoH : -0.761 0.195 -0.450 0.169 MuHd_075 : 12.932 8.113 1.707 3.448 MuHd_095 : 9.416 3.978 2.256 2.271 MuHd_100 : 9.696 5.453 2.812 1.821 MuHd_105 : 4.243 3.661 2.086 0.890 Hmax_075 : -33.200 -9.683 -9.152 -2.290 Hmax_095 : -36.925 -8.400 -9.990 -3.090 Hmax_100 : -26.400 -5.800 -7.520 -1.850 Hmax_105 : -27.400 -5.800 -7.381 -2.010 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9978 0.0022 DFMC : 0.9966 0.0034
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 454 PcyM_0816000 MVHEKRECEVEDRDDEDRGDDHNQVNIKQNAENEDICNGCGKELAKKLSCPICLKKKIYSYFCTQECFKNSWKEHVEKVH 80 EKWEKKEKEEKGNHHIQRVNNEEEEKKKKLMEIIKKKLSPEHFDPTNRKYWIYDRHLKNFVNFVFTGNLRPWPITEINAV 160 PAHIERPDYAFTSIPESELKYKRKSDIYVNSQDEIEKIREACILGRKTLDYAHSLVAPGVTTDEIDKKVHKFIIEHNAYP 240 STLNYYKFPKSCCTSVNEIVCHGIPDLRPLQNGDIINIDISVFLKGVHADLNETFFVGDVDQVSKEAKELVQTCYFSLME 320 SIKKCKPGMLYKNIGNIIDSYVSKKGFSVVRTYSGHGVGKLFHSNPTIPHFKKNKAVGIMKAGHVFTIEPMINQGHYCDV 400 LWPDKWTSATSDGKLSAQFEHTLLITDKGVEILTKRLTDSPSLGFDTRDDLYEV 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0816000 5 --MVHEK|RE 0.066 . PcyM_0816000 6 -MVHEKR|EC 0.178 . PcyM_0816000 13 ECEVEDR|DD 0.109 . PcyM_0816000 18 DRDDEDR|GD 0.104 . PcyM_0816000 28 HNQVNIK|QN 0.074 . PcyM_0816000 42 ICNGCGK|EL 0.077 . PcyM_0816000 46 CGKELAK|KL 0.063 . PcyM_0816000 47 GKELAKK|LS 0.086 . PcyM_0816000 55 SCPICLK|KK 0.055 . PcyM_0816000 56 CPICLKK|KI 0.106 . PcyM_0816000 57 PICLKKK|IY 0.104 . PcyM_0816000 69 CTQECFK|NS 0.060 . PcyM_0816000 73 CFKNSWK|EH 0.059 . PcyM_0816000 78 WKEHVEK|VH 0.073 . PcyM_0816000 82 VEKVHEK|WE 0.066 . PcyM_0816000 85 VHEKWEK|KE 0.061 . PcyM_0816000 86 HEKWEKK|EK 0.132 . PcyM_0816000 88 KWEKKEK|EE 0.064 . PcyM_0816000 91 KKEKEEK|GN 0.076 . PcyM_0816000 98 GNHHIQR|VN 0.135 . PcyM_0816000 106 NNEEEEK|KK 0.056 . PcyM_0816000 107 NEEEEKK|KK 0.075 . PcyM_0816000 108 EEEEKKK|KL 0.122 . PcyM_0816000 109 EEEKKKK|LM 0.101 . PcyM_0816000 115 KLMEIIK|KK 0.058 . PcyM_0816000 116 LMEIIKK|KL 0.113 . PcyM_0816000 117 MEIIKKK|LS 0.099 . PcyM_0816000 128 HFDPTNR|KY 0.081 . PcyM_0816000 129 FDPTNRK|YW 0.084 . PcyM_0816000 135 KYWIYDR|HL 0.077 . PcyM_0816000 138 IYDRHLK|NF 0.099 . PcyM_0816000 150 VFTGNLR|PW 0.072 . PcyM_0816000 166 VPAHIER|PD 0.090 . PcyM_0816000 180 IPESELK|YK 0.065 . PcyM_0816000 182 ESELKYK|RK 0.078 . PcyM_0816000 183 SELKYKR|KS 0.177 . PcyM_0816000 184 ELKYKRK|SD 0.149 . PcyM_0816000 197 SQDEIEK|IR 0.062 . PcyM_0816000 199 DEIEKIR|EA 0.097 . PcyM_0816000 206 EACILGR|KT 0.095 . PcyM_0816000 207 ACILGRK|TL 0.068 . PcyM_0816000 227 TTDEIDK|KV 0.069 . PcyM_0816000 228 TDEIDKK|VH 0.096 . PcyM_0816000 231 IDKKVHK|FI 0.079 . PcyM_0816000 247 STLNYYK|FP 0.059 . PcyM_0816000 250 NYYKFPK|SC 0.100 . PcyM_0816000 268 HGIPDLR|PL 0.076 . PcyM_0816000 285 DISVFLK|GV 0.112 . PcyM_0816000 305 DVDQVSK|EA 0.061 . PcyM_0816000 308 QVSKEAK|EL 0.075 . PcyM_0816000 323 SLMESIK|KC 0.069 . PcyM_0816000 324 LMESIKK|CK 0.077 . PcyM_0816000 326 ESIKKCK|PG 0.063 . PcyM_0816000 332 KPGMLYK|NI 0.091 . PcyM_0816000 344 IDSYVSK|KG 0.079 . PcyM_0816000 345 DSYVSKK|GF 0.157 . PcyM_0816000 351 KGFSVVR|TY 0.107 . PcyM_0816000 360 SGHGVGK|LF 0.071 . PcyM_0816000 372 PTIPHFK|KN 0.071 . PcyM_0816000 373 TIPHFKK|NK 0.115 . PcyM_0816000 375 PHFKKNK|AV 0.108 . PcyM_0816000 381 KAVGIMK|AG 0.060 . PcyM_0816000 405 DVLWPDK|WT 0.061 . PcyM_0816000 414 SATSDGK|LS 0.066 . PcyM_0816000 428 TLLITDK|GV 0.088 . PcyM_0816000 435 GVEILTK|RL 0.063 . PcyM_0816000 436 VEILTKR|LT 0.113 . PcyM_0816000 448 SLGFDTR|DD 0.095 . ____________________________^_________________

  • Fasta :-

    >PcyM_0816000 ATGGTACATGAGAAACGCGAGTGCGAGGTGGAGGACAGAGACGATGAAGACCGAGGGGAT GACCACAACCAGGTCAATATCAAACAGAATGCAGAAAACGAAGACATATGCAATGGGTGT GGGAAAGAGCTAGCCAAAAAATTGAGCTGCCCAATATGCTTGAAAAAAAAAATTTACAGC TATTTTTGCACACAGGAATGTTTCAAAAATTCGTGGAAAGAACATGTGGAAAAAGTACAT GAAAAGTGGGAAAAAAAGGAGAAAGAGGAAAAAGGAAATCATCATATCCAAAGGGTCAAT AACGAAGAGGAAGAAAAAAAAAAAAAGTTAATGGAAATCATAAAAAAAAAATTATCACCT GAACATTTTGATCCAACGAACAGAAAATATTGGATTTATGACAGGCATTTGAAAAATTTC GTCAATTTTGTATTTACGGGGAATTTGAGACCTTGGCCAATAACAGAAATCAATGCCGTG CCGGCACATATAGAAAGGCCAGATTATGCATTCACATCCATCCCCGAATCGGAGTTAAAG TATAAAAGGAAAAGCGATATATATGTGAATAGCCAAGACGAAATTGAAAAAATAAGGGAG GCATGTATTTTGGGAAGGAAAACATTGGACTATGCCCATTCGTTAGTAGCACCAGGAGTA ACTACTGATGAGATTGACAAAAAAGTTCACAAATTTATTATAGAGCATAATGCTTATCCT TCAACTTTAAATTATTATAAATTCCCCAAATCGTGTTGCACATCTGTAAACGAAATTGTA TGTCATGGAATTCCTGACTTGAGACCATTACAAAATGGGGACATAATCAATATCGATATC AGTGTCTTTTTAAAAGGAGTGCATGCAGATTTGAATGAAACGTTTTTTGTTGGTGATGTG GATCAGGTGTCAAAGGAGGCTAAGGAACTTGTACAGACATGCTACTTTTCCCTAATGGAA TCGATAAAAAAATGCAAACCAGGGATGTTATATAAAAATATTGGGAATATCATAGATTCC TATGTTTCCAAAAAGGGTTTTTCTGTGGTACGTACTTACTCGGGTCATGGAGTTGGGAAA TTATTTCATTCCAATCCTACTATTCCTCATTTTAAAAAAAATAAAGCCGTTGGAATTATG AAGGCTGGTCATGTGTTCACCATTGAGCCGATGATAAATCAGGGACACTACTGTGATGTC TTGTGGCCTGACAAGTGGACCAGTGCCACGTCTGATGGGAAATTATCTGCCCAGTTTGAG CACACTTTGTTAATTACCGACAAGGGCGTCGAAATTTTGACCAAGCGGCTGACGGACTCG CCGAGTTTGGGATTCGACACGAGGGATGATTTGTACGAGGTGTAA
  • Download Fasta

  • Fasta :-

    MVHEKRECEVEDRDDEDRGDDHNQVNIKQNAENEDICNGCGKELAKKLSCPICLKKKIYS YFCTQECFKNSWKEHVEKVHEKWEKKEKEEKGNHHIQRVNNEEEEKKKKLMEIIKKKLSP EHFDPTNRKYWIYDRHLKNFVNFVFTGNLRPWPITEINAVPAHIERPDYAFTSIPESELK YKRKSDIYVNSQDEIEKIREACILGRKTLDYAHSLVAPGVTTDEIDKKVHKFIIEHNAYP STLNYYKFPKSCCTSVNEIVCHGIPDLRPLQNGDIINIDISVFLKGVHADLNETFFVGDV DQVSKEAKELVQTCYFSLMESIKKCKPGMLYKNIGNIIDSYVSKKGFSVVRTYSGHGVGK LFHSNPTIPHFKKNKAVGIMKAGHVFTIEPMINQGHYCDVLWPDKWTSATSDGKLSAQFE HTLLITDKGVEILTKRLTDSPSLGFDTRDDLYEV

  • title: active site
  • coordinates: H262,D279,D290,H356,E389,E420
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0816000343 SDSYVSKKGF0.994unspPcyM_0816000343 SDSYVSKKGF0.994unspPcyM_0816000343 SDSYVSKKGF0.994unspPcyM_0816000348 SKKGFSVVRT0.99unspPcyM_081600071 SCFKNSWKEH0.996unspPcyM_0816000119 SKKKLSPEHF0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India