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Computed_GO_Component_IDs:
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Computed_GO_Components:
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Computed_GO_Function_IDs:
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Computed_GO_Functions:
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Computed_GO_Process_IDs:
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Computed_GO_Processes:
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Curated_GO_Component_IDs:
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Curated_GO_Components:
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Curated_GO_Function_IDs:
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Curated_GO_Functions:
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Curated_GO_Processes:
No Results
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Fasta :-
>PcyM_0828000
MRLRLALPLHTGALRRGKQRALPYVQTRTHTNIPKVSTLKNMDMPSIRKSVQLSKKKNLK
SKIVWRNYLYVVILKLYNNQVSNYVDLMIILKLLSKQLSLEKKVLNFICEKLENHMYKLT
IRELSLLMLVLRKHNFDNLYFLNLLAKSILIKMNKNLSYKDLALITFSLSRSIALTEKVY
TNEIFHLSVVKIHNDLKNLNFHSLTLFFYSYSLYFLHHFEHFNSFFYMTKSFIQVIKKNL
YLFNPTDLMFTYLSAVHICGAFNNSVSSVKCESARHSLGGEVSRTNAALLRGGGPKNNHA
LTKYTETHDQITFVPSKTTPGEELTTRSVPAQVPHQVSYTNAKAEQQDGSAREEALSNFL
TQVRHAIVEKLKCFKVEEVTNVLFASIDRDFSINRRYFPFLQKERIHIEDYLHVYVKKGQ
RWEEEEEHPRRGGELTDCRVNSPAEDSSHVLPHPSNYIIRVSEATTHQEEFFINALSEEI
IYRNEFLTARQILLLLYALRGTNTPFIQLEKILLKRLVCLEKELTVSQAMFVYQYLYFRT
CLFHELRRYDPKVYKQDRQKKDVFLLYDGDNEMRETDQRGDHQPTLPSECKRDKDNQVYY
LHDDTSHLKKRRKRDKIKIFLYDHFIFKYPAQVSTKGEEKEITNLQEKKILKRFISLNKR
GGDSLEEVNRSTVTHDENNTPSGETQYQITCYNFYLDVYKIVCLKMVNSLKNEKLSTRTS
MHILEIFKKLNIRDYRIIRHLYKMEKDILFLDNISLEKILKVLLKFNLYNIMHYLGVHRI
LQFMNFNSVDECVSILGLLGMLSTRRKMEHYPGGREKAFFYLPNSCTENAVNYILKNLRD
LTSTHELEKLQITPVYNSLPLKYFKLFKNVRSVKGLAQLWFQQSGEKKNHLVWSGENDRK
KASNFVLHCVDDVNLGEVSLGLRGLGLRGVGSLDYGSRSCGGVSQRRQTPSATSQTNCLH
EYRDVQEEILQDLHTIFPRTVEVYKNVNVSNYTFPLAINLLTLGGAVPNETGVTGGVNTT
DWAGVTDWAGVTDWAGVGSADLAKTHSLGSQCQSDEPSRTQELDRKNTLLVDILYGHDFY
YSLSGTKEQQLKKHNIYVSYYGMHAKKANKKIVNYKKYIILKCVKKIGYNFICIDAKRYV
KNKKKNRDNHLNKKYLTSLILDLIKRKKRIPLCTNRRVSRKNSSATSRQGCKRRSLLRKK
RHTCSVEELDSHVGTNKHLLKIHAGGEKRVSLPGTNHLDKLRHMFQLG
- Download Fasta
-
MitoProt II - v1.101
File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0828000.fa
Sequence name : PcyM_0828000
Sequence length : 1248
VALUES OF COMPUTED PARAMETERS
Coef20 : 4.547
CoefTot : -1.725
ChDiff : 67
ZoneTo : 100
KR : 20
DE : 2
CleavSite : 50
HYDROPHOBIC SCALE USED
GES KD GVH1 ECS
H17 : 1.312 1.424 0.119 0.584
MesoH : 0.165 0.517 -0.303 0.314
MuHd_075 : 39.683 27.189 11.711 9.870
MuHd_095 : 37.214 25.135 11.338 8.829
MuHd_100 : 29.756 22.287 9.184 7.224
MuHd_105 : 30.595 17.507 8.526 6.366
Hmax_075 : 8.050 12.688 0.935 4.463
Hmax_095 : 3.937 14.300 -0.183 4.585
Hmax_100 : 9.100 14.300 -0.443 4.490
Hmax_105 : 4.083 20.000 2.221 4.667
CLASS NOT-MITO MITO(/CHLORO)
DFM : 0.0060 0.9940
DFMC : 0.0050 0.9950
This protein is probably imported in mitochondria.
f(Ser) = 0.0800 f(Arg) = 0.0800 CMi = 0.43956
CMi is the Chloroplast/Mitochondria Index
It has been proposed by Von Heijne et al
(Eur J Biochem,1989, 180: 535-545)
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Fasta :-
>PcyM_0828000
ATGCGGCTGCGGCTCGCGCTGCCCCTGCACACGGGCGCCCTGAGGAGGGGCAAGCAGAGG
GCCCTGCCCTACGTGCAGACGAGGACGCACACGAACATCCCAAAAGTCAGCACCCTGAAG
AACATGGATATGCCCAGCATCCGAAAAAGTGTCCAGTTGAGCAAAAAAAAAAATCTCAAG
TCGAAAATTGTATGGAGGAACTACCTCTACGTAGTTATCCTCAAACTGTACAACAACCAA
GTCAGCAATTATGTCGATCTTATGATTATATTAAAATTGTTAAGCAAGCAACTCTCTTTG
GAGAAAAAAGTATTGAATTTTATCTGTGAGAAGCTGGAGAATCACATGTACAAACTGACA
ATAAGGGAATTAAGTCTACTTATGTTGGTTCTCAGAAAACACAACTTCGATAATTTGTAC
TTCCTCAACTTGCTAGCGAAGTCTATACTAATAAAAATGAATAAAAATTTGTCGTACAAA
GATCTGGCATTGATCACCTTCAGTCTATCGAGAAGCATTGCCTTAACGGAGAAGGTCTAC
ACCAACGAAATTTTCCACCTAAGCGTTGTAAAAATACACAACGATTTGAAGAATCTAAAT
TTCCACTCCCTCACTTTGTTCTTCTACTCCTACAGTCTTTATTTTCTGCACCACTTTGAG
CATTTCAACTCCTTTTTTTACATGACCAAAAGTTTTATCCAAGTGATAAAAAAAAATTTG
TATCTCTTCAACCCCACCGATTTGATGTTCACCTATTTATCTGCTGTGCATATTTGCGGC
GCTTTTAATAACAGTGTGAGCAGTGTCAAATGTGAGAGCGCGAGGCATTCTTTAGGTGGG
GAAGTCTCACGCACTAATGCAGCCTTGCTCAGGGGAGGAGGGCCTAAGAATAATCATGCG
TTGACTAAGTACACGGAGACACACGATCAGATAACGTTTGTACCATCGAAGACAACTCCC
GGGGAAGAACTCACCACGAGGAGTGTTCCCGCACAGGTGCCTCATCAGGTGAGTTACACC
AATGCAAAAGCGGAGCAGCAGGATGGGTCAGCCCGCGAAGAGGCACTCTCCAATTTTCTA
ACCCAAGTGAGACACGCAATTGTAGAGAAGCTAAAATGCTTCAAAGTGGAAGAAGTGACA
AATGTGTTGTTTGCCTCCATAGATAGAGACTTTAGCATTAACAGGAGGTACTTCCCCTTT
CTGCAAAAGGAAAGGATACATATTGAGGATTATCTACATGTGTACGTAAAGAAGGGACAG
AGGTGGGAGGAGGAAGAGGAACACCCTAGAAGGGGAGGAGAACTCACGGACTGTCGCGTC
AATTCCCCTGCGGAAGACTCCTCACATGTGCTCCCCCATCCGTCGAACTACATCATCAGA
GTTAGCGAAGCCACCACTCACCAGGAGGAATTTTTCATTAACGCACTTTCGGAGGAAATA
ATTTATCGTAACGAATTCCTGACCGCGCGGCAAATACTTTTACTATTGTACGCTCTGAGG
GGAACTAACACCCCATTTATACAACTGGAGAAAATTCTGTTGAAGCGATTGGTGTGTTTG
GAAAAGGAACTAACGGTTAGCCAAGCCATGTTCGTCTATCAGTACCTCTACTTCAGGACG
TGCCTGTTTCACGAGTTAAGGAGGTATGACCCAAAAGTGTATAAACAGGACAGGCAAAAA
AAAGATGTGTTCCTCCTGTACGATGGGGACAATGAAATGAGGGAAACTGACCAACGGGGA
GACCATCAACCTACCCTGCCAAGTGAATGCAAAAGGGACAAAGACAATCAGGTGTATTAC
CTCCACGATGATACATCTCACTTGAAGAAAAGGAGAAAAAGGGACAAAATAAAAATCTTT
CTCTATGATCATTTTATTTTTAAGTACCCTGCACAGGTTAGTACAAAAGGGGAAGAAAAA
GAAATCACAAATTTACAGGAAAAAAAAATATTAAAACGTTTCATTAGTCTGAACAAAAGG
GGAGGAGACTCCTTGGAGGAAGTAAATCGGTCAACCGTGACACATGACGAGAATAACACA
CCCAGTGGAGAGACCCAGTACCAAATCACGTGTTACAATTTCTACCTGGATGTATACAAA
ATCGTTTGCCTAAAAATGGTAAACTCTCTAAAAAATGAAAAACTAAGCACTCGTACTAGT
ATGCACATTTTAGAAATATTCAAAAAATTAAACATAAGGGACTATAGAATTATCAGACAT
TTGTATAAAATGGAGAAAGACATTTTATTTTTGGATAACATCAGCCTGGAAAAGATTTTA
AAAGTCCTTCTTAAATTTAACCTCTATAACATTATGCATTATTTGGGGGTGCATAGAATT
CTACAATTTATGAACTTCAACTCGGTGGATGAATGCGTATCCATTTTGGGTCTCCTTGGC
ATGCTCTCCACTCGGAGGAAGATGGAGCATTACCCTGGGGGGAGGGAGAAGGCATTCTTC
TACTTGCCCAACTCATGCACTGAAAATGCTGTCAATTATATTTTAAAAAATCTAAGAGAT
TTGACAAGTACTCATGAGTTAGAGAAGCTTCAGATAACGCCCGTGTACAATTCCCTACCC
CTAAAATATTTCAAGCTGTTCAAAAATGTGCGCTCTGTGAAAGGATTGGCTCAACTTTGG
TTTCAACAGAGTGGGGAGAAAAAAAATCACCTTGTTTGGTCAGGTGAAAATGATCGAAAG
AAGGCGAGCAACTTTGTGTTGCATTGTGTGGATGATGTCAACCTGGGGGAAGTGTCGCTT
GGGTTGCGCGGTTTGGGGTTGCGCGGTGTCGGGTCGCTCGACTACGGGTCACGCAGCTGC
GGGGGTGTCAGTCAAAGGAGACAAACTCCAAGCGCCACTTCTCAGACGAACTGCCTCCAC
GAGTACAGAGATGTCCAGGAGGAAATACTTCAAGACCTGCACACAATTTTTCCTCGGACG
GTTGAAGTTTATAAAAACGTGAACGTGTCGAATTACACATTTCCGCTGGCTATTAATTTG
CTAACGCTGGGGGGTGCAGTGCCTAACGAGACTGGCGTTACTGGCGGGGTTAACACAACT
GACTGGGCTGGCGTTACTGACTGGGCTGGCGTTACTGACTGGGCTGGCGTGGGGAGTGCC
GACTTGGCCAAGACACACTCGCTTGGAAGTCAGTGCCAAAGCGATGAACCCAGCCGGACA
CAAGAACTGGACAGAAAAAACACCCTCCTTGTGGATATCCTGTACGGTCACGACTTTTAC
TACTCCCTGAGTGGAACCAAAGAACAACAGCTGAAGAAGCATAACATTTACGTGTCCTAC
TATGGCATGCATGCGAAGAAGGCAAATAAAAAAATAGTTAATTATAAAAAGTACATCATA
TTGAAGTGCGTCAAAAAAATTGGGTATAATTTCATTTGCATTGATGCAAAGAGGTATGTA
AAAAACAAAAAAAAAAACAGAGACAATCACCTGAACAAAAAATACCTAACTAGTTTAATC
CTCGATTTGATTAAGAGGAAGAAAAGAATTCCCCTGTGCACAAACAGAAGGGTTAGTAGA
AAAAACAGCTCAGCTACATCGCGACAAGGGTGCAAAAGAAGGTCACTTTTGCGAAAGAAA
AGGCACACGTGCAGCGTTGAAGAGTTGGACTCCCATGTGGGGACAAACAAACACCTCCTC
AAGATACACGCTGGGGGAGAAAAAAGGGTGAGCCTCCCAGGGACCAACCATCTGGACAAG
TTGCGGCACATGTTCCAGCTTGGGTAG
- Download Fasta
|
ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method | ID | Site | Peptide | Score | Method |
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PcyM_0828000 | 277 S | SARHSLGGE | 0.994 | unsp | PcyM_0828000 | 277 S | SARHSLGGE | 0.994 | unsp | PcyM_0828000 | 277 S | SARHSLGGE | 0.994 | unsp | PcyM_0828000 | 442 S | CRVNSPAED | 0.995 | unsp | PcyM_0828000 | 949 T | QRRQTPSAT | 0.995 | unsp | PcyM_0828000 | 1179 S | NRRVSRKNS | 0.998 | unsp | PcyM_0828000 | 1205 S | RHTCSVEEL | 0.994 | unsp | PcyM_0828000 | 54 S | SVQLSKKKN | 0.993 | unsp | PcyM_0828000 | 158 S | NKNLSYKDL | 0.998 | unsp |