PcyM_0917600 | cysteine proteinase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0917600OTHER0.9993010.0006900.000010
No Results

  • Fasta :-

    >PcyM_0917600 MEYHMEYSNDKSHKPEKELFVEKSFCGRNDKGKKSLLVALSVSAICLLAGSAFYFTRTGK GNDGLLYGNAHDESSSDDFIITTLLKSPGGKKFIVSKLQELLASYDQRINSGRAKEEEAS PSKEGPTDEARSTSLTTVSRQKQGNLKVSKKIDINFANSRFLMINLEKVNAFYLFVKEHG KKYKTTEEMQQRYLAFTDNLERINSHNGKANVLYKKGTNQYSDISFEEFRKTMLTLRFDL NKKLANSPHVSNYDDALKKYKPADAVVDNEKYDWREHNAVSEVKNQNLCGSCWAFGAVGV VESQYAIRKNQHILISEQELVDCSGKNFGCYGGLASLAFDDMIDLGFLCSESEYPYVGFK PHSCDMKKCKEKYTIKSYVKIPEDKYKEAIQFIGPLTLGITVNDDFYDYKEGIFNSECTE EPNHEVMIVGYGVQEIFNSEINASEKHYYYIIKNSWGEEWGEKGFMKIETDELGLKKTNN MTEAYIPLLD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0917600.fa Sequence name : PcyM_0917600 Sequence length : 490 VALUES OF COMPUTED PARAMETERS Coef20 : 2.539 CoefTot : 0.000 ChDiff : -7 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.024 2.282 0.483 0.701 MesoH : -0.499 0.299 -0.291 0.228 MuHd_075 : 8.204 5.661 1.232 0.926 MuHd_095 : 38.232 13.443 9.304 4.134 MuHd_100 : 34.964 13.512 8.327 4.027 MuHd_105 : 24.375 10.259 5.999 2.942 Hmax_075 : -18.900 -10.150 -8.637 -2.030 Hmax_095 : -3.400 -6.100 -5.048 -0.100 Hmax_100 : -3.400 -6.100 -4.847 -0.100 Hmax_105 : -5.200 -6.400 -4.847 -0.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9987 0.0013 DFMC : 0.9971 0.0029
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 490 PcyM_0917600 MEYHMEYSNDKSHKPEKELFVEKSFCGRNDKGKKSLLVALSVSAICLLAGSAFYFTRTGKGNDGLLYGNAHDESSSDDFI 80 ITTLLKSPGGKKFIVSKLQELLASYDQRINSGRAKEEEASPSKEGPTDEARSTSLTTVSRQKQGNLKVSKKIDINFANSR 160 FLMINLEKVNAFYLFVKEHGKKYKTTEEMQQRYLAFTDNLERINSHNGKANVLYKKGTNQYSDISFEEFRKTMLTLRFDL 240 NKKLANSPHVSNYDDALKKYKPADAVVDNEKYDWREHNAVSEVKNQNLCGSCWAFGAVGVVESQYAIRKNQHILISEQEL 320 VDCSGKNFGCYGGLASLAFDDMIDLGFLCSESEYPYVGFKPHSCDMKKCKEKYTIKSYVKIPEDKYKEAIQFIGPLTLGI 400 TVNDDFYDYKEGIFNSECTEEPNHEVMIVGYGVQEIFNSEINASEKHYYYIIKNSWGEEWGEKGFMKIETDELGLKKTNN 480 MTEAYIPLLD 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0917600 11 MEYSNDK|SH 0.073 . PcyM_0917600 14 SNDKSHK|PE 0.069 . PcyM_0917600 17 KSHKPEK|EL 0.075 . PcyM_0917600 23 KELFVEK|SF 0.072 . PcyM_0917600 28 EKSFCGR|ND 0.089 . PcyM_0917600 31 FCGRNDK|GK 0.110 . PcyM_0917600 33 GRNDKGK|KS 0.074 . PcyM_0917600 34 RNDKGKK|SL 0.143 . PcyM_0917600 57 SAFYFTR|TG 0.083 . PcyM_0917600 60 YFTRTGK|GN 0.133 . PcyM_0917600 86 IITTLLK|SP 0.072 . PcyM_0917600 91 LKSPGGK|KF 0.071 . PcyM_0917600 92 KSPGGKK|FI 0.102 . PcyM_0917600 97 KKFIVSK|LQ 0.059 . PcyM_0917600 108 LASYDQR|IN 0.120 . PcyM_0917600 113 QRINSGR|AK 0.123 . PcyM_0917600 115 INSGRAK|EE 0.087 . PcyM_0917600 123 EEASPSK|EG 0.057 . PcyM_0917600 131 GPTDEAR|ST 0.138 . PcyM_0917600 140 SLTTVSR|QK 0.088 . PcyM_0917600 142 TTVSRQK|QG 0.058 . PcyM_0917600 147 QKQGNLK|VS 0.061 . PcyM_0917600 150 GNLKVSK|KI 0.074 . PcyM_0917600 151 NLKVSKK|ID 0.091 . PcyM_0917600 160 INFANSR|FL 0.105 . PcyM_0917600 168 LMINLEK|VN 0.058 . PcyM_0917600 177 AFYLFVK|EH 0.071 . PcyM_0917600 181 FVKEHGK|KY 0.066 . PcyM_0917600 182 VKEHGKK|YK 0.134 . PcyM_0917600 184 EHGKKYK|TT 0.087 . PcyM_0917600 192 TEEMQQR|YL 0.093 . PcyM_0917600 202 FTDNLER|IN 0.078 . PcyM_0917600 209 INSHNGK|AN 0.073 . PcyM_0917600 215 KANVLYK|KG 0.068 . PcyM_0917600 216 ANVLYKK|GT 0.113 . PcyM_0917600 230 ISFEEFR|KT 0.082 . PcyM_0917600 231 SFEEFRK|TM 0.068 . PcyM_0917600 237 KTMLTLR|FD 0.073 . PcyM_0917600 242 LRFDLNK|KL 0.068 . PcyM_0917600 243 RFDLNKK|LA 0.074 . PcyM_0917600 258 NYDDALK|KY 0.056 . PcyM_0917600 259 YDDALKK|YK 0.078 . PcyM_0917600 261 DALKKYK|PA 0.088 . PcyM_0917600 271 AVVDNEK|YD 0.062 . PcyM_0917600 275 NEKYDWR|EH 0.082 . PcyM_0917600 284 NAVSEVK|NQ 0.061 . PcyM_0917600 308 ESQYAIR|KN 0.099 . PcyM_0917600 309 SQYAIRK|NQ 0.081 . PcyM_0917600 326 LVDCSGK|NF 0.065 . PcyM_0917600 360 YPYVGFK|PH 0.060 . PcyM_0917600 367 PHSCDMK|KC 0.070 . PcyM_0917600 368 HSCDMKK|CK 0.116 . PcyM_0917600 370 CDMKKCK|EK 0.080 . PcyM_0917600 372 MKKCKEK|YT 0.085 . PcyM_0917600 376 KEKYTIK|SY 0.081 . PcyM_0917600 380 TIKSYVK|IP 0.063 . PcyM_0917600 385 VKIPEDK|YK 0.080 . PcyM_0917600 387 IPEDKYK|EA 0.091 . PcyM_0917600 410 DDFYDYK|EG 0.058 . PcyM_0917600 446 EINASEK|HY 0.073 . PcyM_0917600 453 HYYYIIK|NS 0.074 . PcyM_0917600 463 GEEWGEK|GF 0.080 . PcyM_0917600 467 GEKGFMK|IE 0.076 . PcyM_0917600 476 TDELGLK|KT 0.058 . PcyM_0917600 477 DELGLKK|TN 0.081 . ____________________________^_________________

  • Fasta :-

    >PcyM_0917600 ATGGAATATCACATGGAGTACTCGAACGACAAGTCGCATAAACCGGAGAAGGAACTTTTT GTGGAAAAATCGTTCTGTGGCAGAAATGACAAGGGGAAGAAGAGCCTCCTCGTGGCTCTG TCCGTGTCGGCCATATGCCTTCTAGCTGGATCTGCATTTTACTTTACCCGCACGGGGAAG GGGAATGATGGCCTCCTGTACGGTAACGCACATGACGAGAGCAGCAGCGATGATTTTATC ATCACCACTTTGTTGAAAAGCCCAGGTGGAAAGAAATTCATTGTATCCAAGTTGCAAGAG TTGTTAGCTTCGTACGATCAGCGCATCAACTCGGGTAGAGCAAAGGAGGAAGAAGCTTCC CCTTCGAAGGAGGGACCAACTGATGAAGCGCGTAGTACATCCCTTACTACGGTCAGTAGA CAAAAGCAGGGAAACTTGAAAGTGTCCAAAAAAATTGACATCAACTTTGCCAATTCCAGA TTTTTGATGATCAACTTGGAGAAGGTGAACGCATTTTACCTCTTTGTGAAGGAGCACGGG AAGAAATACAAAACAACAGAGGAGATGCAGCAGAGGTACCTTGCCTTCACGGACAATTTG GAAAGGATAAACTCGCATAACGGTAAGGCAAATGTTCTTTACAAGAAGGGAACAAACCAG TACAGTGACATAAGCTTTGAGGAATTCCGAAAGACCATGCTAACTTTGCGGTTTGACTTG AACAAAAAATTGGCCAATTCACCCCATGTTAGTAACTACGATGACGCGTTAAAGAAATAC AAACCAGCAGATGCCGTGGTGGACAATGAGAAGTATGATTGGAGAGAACACAACGCAGTG AGTGAAGTAAAAAATCAAAATTTATGTGGCTCATGTTGGGCGTTTGGAGCTGTAGGTGTT GTAGAATCTCAATATGCCATCCGAAAAAATCAACATATATTAATAAGTGAACAAGAATTG GTCGACTGTTCTGGTAAAAACTTTGGCTGCTATGGTGGTTTAGCTTCCCTCGCTTTTGAC GATATGATCGACTTAGGGTTCCTGTGCTCGGAAAGTGAATACCCCTATGTTGGATTCAAA CCACACAGTTGTGATATGAAGAAATGTAAAGAAAAATATACCATCAAAAGTTACGTTAAA ATTCCGGAGGATAAATATAAAGAAGCTATTCAGTTCATTGGACCTCTGACTTTGGGAATT ACTGTCAATGATGATTTTTACGATTACAAGGAGGGTATCTTCAACTCTGAGTGTACAGAA GAACCTAACCACGAAGTTATGATTGTTGGGTATGGTGTGCAAGAAATTTTCAACAGCGAA ATAAATGCTAGTGAGAAACACTACTACTACATTATCAAGAACTCTTGGGGGGAGGAATGG GGTGAAAAGGGATTCATGAAAATTGAGACGGACGAATTGGGTTTGAAGAAGACCAACAAC ATGACTGAGGCTTATATCCCTCTGCTTGACTAG
  • Download Fasta

  • Fasta :-

    MEYHMEYSNDKSHKPEKELFVEKSFCGRNDKGKKSLLVALSVSAICLLAGSAFYFTRTGK GNDGLLYGNAHDESSSDDFIITTLLKSPGGKKFIVSKLQELLASYDQRINSGRAKEEEAS PSKEGPTDEARSTSLTTVSRQKQGNLKVSKKIDINFANSRFLMINLEKVNAFYLFVKEHG KKYKTTEEMQQRYLAFTDNLERINSHNGKANVLYKKGTNQYSDISFEEFRKTMLTLRFDL NKKLANSPHVSNYDDALKKYKPADAVVDNEKYDWREHNAVSEVKNQNLCGSCWAFGAVGV VESQYAIRKNQHILISEQELVDCSGKNFGCYGGLASLAFDDMIDLGFLCSESEYPYVGFK PHSCDMKKCKEKYTIKSYVKIPEDKYKEAIQFIGPLTLGITVNDDFYDYKEGIFNSECTE EPNHEVMIVGYGVQEIFNSEINASEKHYYYIIKNSWGEEWGEKGFMKIETDELGLKKTNN MTEAYIPLLD

  • title: active site
  • coordinates: Q286,C292,H424,N454
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_091760012 SSNDKSHKPE0.992unspPcyM_0917600225 SYSDISFEEF0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India