PcyM_0917700 | cysteine proteinase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0917700OTHER0.9998860.0000720.000042
No Results

  • Fasta :-

    >PcyM_0917700 MEYHMQYNPQDPINAEKKAFMGQGYIDKAVLKKKKNYLILLSVSAICIFVCSAFYFTRPA KRDGSFTYQITDKVDDDYIINYLLKSKNGKKFIASKVQELISTYDQKDNNSPSLHGSTYK RFAKRDKCTGNKCSVSPYRKNADEVEIVSQANIVNPLIDTKFLMTNLETVNSFYLFVKEY GKEYKTADEMQQRYQSFVENLAKIKAHNSKENVLYRKGMNRFGDLSFEEFKKKYLTLKSL DFKADGTKSPRVSNYDDIIHKYKPKDGTFDYVKHDWRELNAVTRVKDQQNCGACWAFSTV GVVESQYAIRKKELVALSEQEMVDCSFKNHGCDGGFIPNAFDDLIDFGGVCKEKDYPYVD LIPELCDINKCKNKYTITTYVEIPQVRFKEAIKFLGPISVSINANDDFAYYEGGLFDGSC GFFPNHAVILVGYGMEEIYDAMTRKNEKRYYYWLKNSWGEKWGEKGYMKIQTDEFGLMKT CSLGEQAYIALIDEV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0917700.fa Sequence name : PcyM_0917700 Sequence length : 495 VALUES OF COMPUTED PARAMETERS Coef20 : 2.660 CoefTot : 0.000 ChDiff : 4 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.312 2.653 0.639 0.787 MesoH : -0.668 0.213 -0.382 0.248 MuHd_075 : 21.248 8.621 4.315 1.870 MuHd_095 : 21.317 11.973 5.192 3.992 MuHd_100 : 18.983 11.424 4.924 3.757 MuHd_105 : 12.623 8.186 4.689 2.904 Hmax_075 : -0.817 -3.500 -4.333 0.455 Hmax_095 : -5.688 -4.462 -5.493 0.875 Hmax_100 : -5.000 -1.900 -4.543 1.440 Hmax_105 : -5.000 -4.600 -4.793 0.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9980 0.0020 DFMC : 0.9975 0.0025
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 495 PcyM_0917700 MEYHMQYNPQDPINAEKKAFMGQGYIDKAVLKKKKNYLILLSVSAICIFVCSAFYFTRPAKRDGSFTYQITDKVDDDYII 80 NYLLKSKNGKKFIASKVQELISTYDQKDNNSPSLHGSTYKRFAKRDKCTGNKCSVSPYRKNADEVEIVSQANIVNPLIDT 160 KFLMTNLETVNSFYLFVKEYGKEYKTADEMQQRYQSFVENLAKIKAHNSKENVLYRKGMNRFGDLSFEEFKKKYLTLKSL 240 DFKADGTKSPRVSNYDDIIHKYKPKDGTFDYVKHDWRELNAVTRVKDQQNCGACWAFSTVGVVESQYAIRKKELVALSEQ 320 EMVDCSFKNHGCDGGFIPNAFDDLIDFGGVCKEKDYPYVDLIPELCDINKCKNKYTITTYVEIPQVRFKEAIKFLGPISV 400 SINANDDFAYYEGGLFDGSCGFFPNHAVILVGYGMEEIYDAMTRKNEKRYYYWLKNSWGEKWGEKGYMKIQTDEFGLMKT 480 CSLGEQAYIALIDEV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0917700 17 DPINAEK|KA 0.078 . PcyM_0917700 18 PINAEKK|AF 0.132 . PcyM_0917700 28 GQGYIDK|AV 0.075 . PcyM_0917700 32 IDKAVLK|KK 0.060 . PcyM_0917700 33 DKAVLKK|KK 0.087 . PcyM_0917700 34 KAVLKKK|KN 0.109 . PcyM_0917700 35 AVLKKKK|NY 0.094 . PcyM_0917700 58 SAFYFTR|PA 0.102 . PcyM_0917700 61 YFTRPAK|RD 0.112 . PcyM_0917700 62 FTRPAKR|DG 0.201 . PcyM_0917700 73 TYQITDK|VD 0.066 . PcyM_0917700 85 IINYLLK|SK 0.080 . PcyM_0917700 87 NYLLKSK|NG 0.055 . PcyM_0917700 90 LKSKNGK|KF 0.086 . PcyM_0917700 91 KSKNGKK|FI 0.114 . PcyM_0917700 96 KKFIASK|VQ 0.059 . PcyM_0917700 107 ISTYDQK|DN 0.065 . PcyM_0917700 120 LHGSTYK|RF 0.060 . PcyM_0917700 121 HGSTYKR|FA 0.275 . PcyM_0917700 124 TYKRFAK|RD 0.115 . PcyM_0917700 125 YKRFAKR|DK 0.426 . PcyM_0917700 127 RFAKRDK|CT 0.078 . PcyM_0917700 132 DKCTGNK|CS 0.052 . PcyM_0917700 139 CSVSPYR|KN 0.097 . PcyM_0917700 140 SVSPYRK|NA 0.149 . PcyM_0917700 161 NPLIDTK|FL 0.075 . PcyM_0917700 178 SFYLFVK|EY 0.077 . PcyM_0917700 182 FVKEYGK|EY 0.060 . PcyM_0917700 185 EYGKEYK|TA 0.076 . PcyM_0917700 193 ADEMQQR|YQ 0.116 . PcyM_0917700 203 FVENLAK|IK 0.058 . PcyM_0917700 205 ENLAKIK|AH 0.066 . PcyM_0917700 210 IKAHNSK|EN 0.070 . PcyM_0917700 216 KENVLYR|KG 0.094 . PcyM_0917700 217 ENVLYRK|GM 0.079 . PcyM_0917700 221 YRKGMNR|FG 0.109 . PcyM_0917700 231 LSFEEFK|KK 0.060 . PcyM_0917700 232 SFEEFKK|KY 0.077 . PcyM_0917700 233 FEEFKKK|YL 0.102 . PcyM_0917700 238 KKYLTLK|SL 0.093 . PcyM_0917700 243 LKSLDFK|AD 0.082 . PcyM_0917700 248 FKADGTK|SP 0.073 . PcyM_0917700 251 DGTKSPR|VS 0.070 . PcyM_0917700 261 YDDIIHK|YK 0.058 . PcyM_0917700 263 DIIHKYK|PK 0.077 . PcyM_0917700 265 IHKYKPK|DG 0.070 . PcyM_0917700 273 GTFDYVK|HD 0.064 . PcyM_0917700 277 YVKHDWR|EL 0.092 . PcyM_0917700 284 ELNAVTR|VK 0.116 . PcyM_0917700 286 NAVTRVK|DQ 0.070 . PcyM_0917700 310 ESQYAIR|KK 0.087 . PcyM_0917700 311 SQYAIRK|KE 0.074 . PcyM_0917700 312 QYAIRKK|EL 0.105 . PcyM_0917700 328 MVDCSFK|NH 0.062 . PcyM_0917700 352 DFGGVCK|EK 0.058 . PcyM_0917700 354 GGVCKEK|DY 0.070 . PcyM_0917700 370 ELCDINK|CK 0.062 . PcyM_0917700 372 CDINKCK|NK 0.077 . PcyM_0917700 374 INKCKNK|YT 0.079 . PcyM_0917700 387 VEIPQVR|FK 0.112 . PcyM_0917700 389 IPQVRFK|EA 0.088 . PcyM_0917700 393 RFKEAIK|FL 0.081 . PcyM_0917700 444 IYDAMTR|KN 0.076 . PcyM_0917700 445 YDAMTRK|NE 0.078 . PcyM_0917700 448 MTRKNEK|RY 0.064 . PcyM_0917700 449 TRKNEKR|YY 0.285 . PcyM_0917700 455 RYYYWLK|NS 0.069 . PcyM_0917700 461 KNSWGEK|WG 0.080 . PcyM_0917700 465 GEKWGEK|GY 0.078 . PcyM_0917700 469 GEKGYMK|IQ 0.069 . PcyM_0917700 479 DEFGLMK|TC 0.066 . ____________________________^_________________

  • Fasta :-

    >PcyM_0917700 ATGGAATACCACATGCAGTACAACCCCCAGGACCCTATAAACGCCGAAAAGAAGGCGTTC ATGGGTCAGGGCTACATTGACAAGGCCGTTTTGAAGAAAAAGAAAAACTACCTCATCCTC CTGTCCGTCTCAGCCATCTGCATATTCGTGTGCTCCGCATTTTACTTCACGAGACCCGCA AAAAGGGATGGATCATTTACGTACCAAATTACGGACAAAGTAGACGATGATTACATAATA AATTATTTGCTAAAGAGTAAAAATGGAAAAAAATTTATCGCATCCAAAGTACAGGAGTTA ATATCGACGTATGACCAGAAGGACAACAACTCCCCCTCTCTACATGGATCCACATATAAA CGTTTTGCAAAGAGGGACAAATGCACAGGAAATAAATGCAGTGTTAGTCCGTATAGGAAG AATGCAGATGAGGTAGAGATTGTATCCCAAGCGAATATAGTGAACCCTCTCATTGACACC AAATTTTTGATGACCAACTTGGAGACTGTGAATTCCTTTTACCTCTTTGTGAAGGAGTAC GGGAAGGAATACAAAACGGCAGATGAAATGCAACAGAGGTATCAATCCTTTGTAGAAAAC TTGGCCAAAATAAAGGCACACAATAGTAAGGAGAATGTCCTATACAGAAAAGGGATGAAC CGATTTGGAGACCTCTCTTTTGAAGAATTTAAGAAAAAATATTTGACCCTGAAAAGTTTG GACTTTAAGGCAGATGGTACGAAATCACCACGAGTGAGCAATTATGACGATATTATACAT AAGTACAAACCGAAAGATGGGACATTCGATTACGTGAAGCATGACTGGAGAGAGTTAAAT GCGGTAACACGTGTGAAGGACCAACAGAATTGTGGTGCGTGTTGGGCGTTTAGCACAGTA GGTGTTGTAGAGTCCCAGTACGCAATTAGAAAAAAAGAGTTAGTGGCCCTAAGTGAACAA GAAATGGTAGACTGCTCTTTCAAAAACCATGGCTGTGATGGAGGTTTCATCCCAAACGCC TTTGATGACCTAATCGATTTCGGAGGAGTATGCAAAGAAAAGGATTACCCCTATGTCGAT TTAATTCCAGAACTGTGCGACATTAACAAATGCAAAAATAAGTATACAATTACGACCTAC GTGGAGATTCCCCAAGTTCGATTTAAGGAGGCAATAAAATTTTTAGGACCCATCAGTGTG AGCATTAATGCAAATGACGATTTTGCTTACTACGAGGGAGGTCTCTTTGATGGCTCCTGT GGGTTCTTCCCCAACCATGCTGTCATCCTTGTTGGCTACGGTATGGAAGAAATATATGAT GCCATGACCCGAAAGAATGAAAAACGCTACTACTATTGGCTGAAGAATTCTTGGGGAGAG AAATGGGGAGAAAAGGGATATATGAAGATTCAAACGGATGAGTTCGGATTAATGAAGACG TGCTCTCTGGGTGAACAGGCCTACATTGCTTTAATTGATGAAGTTTGA
  • Download Fasta

  • Fasta :-

    MEYHMQYNPQDPINAEKKAFMGQGYIDKAVLKKKKNYLILLSVSAICIFVCSAFYFTRPA KRDGSFTYQITDKVDDDYIINYLLKSKNGKKFIASKVQELISTYDQKDNNSPSLHGSTYK RFAKRDKCTGNKCSVSPYRKNADEVEIVSQANIVNPLIDTKFLMTNLETVNSFYLFVKEY GKEYKTADEMQQRYQSFVENLAKIKAHNSKENVLYRKGMNRFGDLSFEEFKKKYLTLKSL DFKADGTKSPRVSNYDDIIHKYKPKDGTFDYVKHDWRELNAVTRVKDQQNCGACWAFSTV GVVESQYAIRKKELVALSEQEMVDCSFKNHGCDGGFIPNAFDDLIDFGGVCKEKDYPYVD LIPELCDINKCKNKYTITTYVEIPQVRFKEAIKFLGPISVSINANDDFAYYEGGLFDGSC GFFPNHAVILVGYGMEEIYDAMTRKNEKRYYYWLKNSWGEKWGEKGYMKIQTDEFGLMKT CSLGEQAYIALIDEV

  • title: active site
  • coordinates: Q288,C294,H426,N456
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0917700253 SSPRVSNYDD0.998unspPcyM_0917700253 SSPRVSNYDD0.998unspPcyM_0917700253 SSPRVSNYDD0.998unspPcyM_0917700102 SQELISTYDQ0.994unspPcyM_0917700226 SFGDLSFEEF0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India