PcyM_0922300 | ATP-dependent zinc metalloprotease FTSH, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_0922300OTHER0.9190370.0014610.079503
No Results

  • Fasta :-

    >PcyM_0922300 MMNRTHMLLKTTRGIPNSGMMGRGGLVEEVLSCRRYLGMLLNVSHFGGAVEGSVVGSVVG SCPGGVVGSVRGGGPGSGMVSGSRKGARRLLHVLKKYMRICCREGGLKKGELPKLDEAAR RLLQMRGSTQVFPDEGKPRDEHFARKEASKAHIDEENLPSGDWRMRSSSHNSFPSHNVFF PPRKYEQLATGLQQNRRKFHQMVQMYLSKAPKGFENFEKKNKKEEGSASSSSSSSSSNSF KPDEEKNNKKFDNFFFFFFFMLLLFFFLFVDSNGLYNEVTQNDFFMNYLSKGYVDKIKLI NKDYVKAYLNVHGMTKYHQKYVSFRIGNSDAFERKVELIQRDMNIQRDQIIEVQYTNETN VLDEVKSYVPTILFFLLFAFIFQKITLKNVASSGMDRLFKMNRMNPINKQQLKTDVRFSS VAGMKQAKEEIMEFVDFLRSPSKYEALGAKMPKGALLCGAPGTGKTLLAKAVAGEANVPF FNISGSDFIEVFVGIGPSRVRELFAQARKHAPSIIFIDEIDAVGRKRSKGGFAGGGNDER ENTLNQMLVEMDGFHTSNDNVVVLAGTNRVDILDPAITRPGRFDRIVNISKPDINERSEI FQVHLKNLKLHHTLDIQSISYLLASLTPGFVGADIANVVNEGAIQCARRSNMVGVQVKDF ELAIERVIGGLPKSSSLISPLEKKIISYHETGHALIGWLLEYADPVLKVSILPRSNGALG YSQHLSEEIMLFSRDAILDKVAVILGGRAAEELFIGKITTGAIDDLNKVTQLSYSYVSQY GMNKEIGLVSFQPNSSSEYSFYRPHSECLAHLIDNEVRSLIETQYNRVKSILRKHEKHVH KLAELLFQKETISYQDIVQCIGERPFPVKSTYEKFVKANPYKLVGAGEGIGGEGIGGEGI GGEGVGGEGTGGKGVGGEGGNVVATVGVPPNGEAEKATQGTHSAQSTQSTLGEPKEALAE QHSTGKRGPAEEAAGENSDDGNKGNKVSHVGTTR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0922300.fa Sequence name : PcyM_0922300 Sequence length : 994 VALUES OF COMPUTED PARAMETERS Coef20 : 4.086 CoefTot : -1.240 ChDiff : 15 ZoneTo : 27 KR : 4 DE : 0 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 3.406 3.065 0.473 1.138 MesoH : 0.056 0.492 -0.117 0.278 MuHd_075 : 28.236 12.256 4.735 6.263 MuHd_095 : 27.766 15.932 9.396 5.900 MuHd_100 : 30.118 19.732 10.318 6.421 MuHd_105 : 39.961 23.464 11.973 8.225 Hmax_075 : 14.700 9.400 1.492 4.330 Hmax_095 : 13.700 8.000 1.884 4.000 Hmax_100 : 13.700 11.000 1.848 4.100 Hmax_105 : 15.500 14.500 2.863 4.630 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8178 0.1822 DFMC : 0.7233 0.2767
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 994 PcyM_0922300 MMNRTHMLLKTTRGIPNSGMMGRGGLVEEVLSCRRYLGMLLNVSHFGGAVEGSVVGSVVGSCPGGVVGSVRGGGPGSGMV 80 SGSRKGARRLLHVLKKYMRICCREGGLKKGELPKLDEAARRLLQMRGSTQVFPDEGKPRDEHFARKEASKAHIDEENLPS 160 GDWRMRSSSHNSFPSHNVFFPPRKYEQLATGLQQNRRKFHQMVQMYLSKAPKGFENFEKKNKKEEGSASSSSSSSSSNSF 240 KPDEEKNNKKFDNFFFFFFFMLLLFFFLFVDSNGLYNEVTQNDFFMNYLSKGYVDKIKLINKDYVKAYLNVHGMTKYHQK 320 YVSFRIGNSDAFERKVELIQRDMNIQRDQIIEVQYTNETNVLDEVKSYVPTILFFLLFAFIFQKITLKNVASSGMDRLFK 400 MNRMNPINKQQLKTDVRFSSVAGMKQAKEEIMEFVDFLRSPSKYEALGAKMPKGALLCGAPGTGKTLLAKAVAGEANVPF 480 FNISGSDFIEVFVGIGPSRVRELFAQARKHAPSIIFIDEIDAVGRKRSKGGFAGGGNDERENTLNQMLVEMDGFHTSNDN 560 VVVLAGTNRVDILDPAITRPGRFDRIVNISKPDINERSEIFQVHLKNLKLHHTLDIQSISYLLASLTPGFVGADIANVVN 640 EGAIQCARRSNMVGVQVKDFELAIERVIGGLPKSSSLISPLEKKIISYHETGHALIGWLLEYADPVLKVSILPRSNGALG 720 YSQHLSEEIMLFSRDAILDKVAVILGGRAAEELFIGKITTGAIDDLNKVTQLSYSYVSQYGMNKEIGLVSFQPNSSSEYS 800 FYRPHSECLAHLIDNEVRSLIETQYNRVKSILRKHEKHVHKLAELLFQKETISYQDIVQCIGERPFPVKSTYEKFVKANP 880 YKLVGAGEGIGGEGIGGEGIGGEGVGGEGTGGKGVGGEGGNVVATVGVPPNGEAEKATQGTHSAQSTQSTLGEPKEALAE 960 QHSTGKRGPAEEAAGENSDDGNKGNKVSHVGTTR 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................P....................................................... 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 .................................. 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_0922300 4 ---MMNR|TH 0.071 . PcyM_0922300 10 RTHMLLK|TT 0.075 . PcyM_0922300 13 MLLKTTR|GI 0.114 . PcyM_0922300 23 NSGMMGR|GG 0.102 . PcyM_0922300 34 EEVLSCR|RY 0.071 . PcyM_0922300 35 EVLSCRR|YL 0.121 . PcyM_0922300 71 GVVGSVR|GG 0.134 . PcyM_0922300 84 GMVSGSR|KG 0.069 . PcyM_0922300 85 MVSGSRK|GA 0.155 . PcyM_0922300 88 GSRKGAR|RL 0.120 . PcyM_0922300 89 SRKGARR|LL 0.159 . PcyM_0922300 95 RLLHVLK|KY 0.064 . PcyM_0922300 96 LLHVLKK|YM 0.113 . PcyM_0922300 99 VLKKYMR|IC 0.085 . PcyM_0922300 103 YMRICCR|EG 0.086 . PcyM_0922300 108 CREGGLK|KG 0.054 . PcyM_0922300 109 REGGLKK|GE 0.097 . PcyM_0922300 114 KKGELPK|LD 0.072 . PcyM_0922300 120 KLDEAAR|RL 0.086 . PcyM_0922300 121 LDEAARR|LL 0.128 . PcyM_0922300 126 RRLLQMR|GS 0.158 . PcyM_0922300 137 VFPDEGK|PR 0.056 . PcyM_0922300 139 PDEGKPR|DE 0.128 . PcyM_0922300 145 RDEHFAR|KE 0.091 . PcyM_0922300 146 DEHFARK|EA 0.127 . PcyM_0922300 150 ARKEASK|AH 0.081 . PcyM_0922300 164 LPSGDWR|MR 0.149 . PcyM_0922300 166 SGDWRMR|SS 0.133 . PcyM_0922300 183 NVFFPPR|KY 0.100 . PcyM_0922300 184 VFFPPRK|YE 0.072 . PcyM_0922300 196 TGLQQNR|RK 0.088 . PcyM_0922300 197 GLQQNRR|KF 0.185 . PcyM_0922300 198 LQQNRRK|FH 0.105 . PcyM_0922300 209 VQMYLSK|AP 0.062 . PcyM_0922300 212 YLSKAPK|GF 0.083 . PcyM_0922300 219 GFENFEK|KN 0.079 . PcyM_0922300 220 FENFEKK|NK 0.113 . PcyM_0922300 222 NFEKKNK|KE 0.063 . PcyM_0922300 223 FEKKNKK|EE 0.104 . PcyM_0922300 241 SSSNSFK|PD 0.088 . PcyM_0922300 246 FKPDEEK|NN 0.058 . PcyM_0922300 249 DEEKNNK|KF 0.059 . PcyM_0922300 250 EEKNNKK|FD 0.100 . PcyM_0922300 291 FMNYLSK|GY 0.071 . PcyM_0922300 296 SKGYVDK|IK 0.065 . PcyM_0922300 298 GYVDKIK|LI 0.065 . PcyM_0922300 302 KIKLINK|DY 0.066 . PcyM_0922300 306 INKDYVK|AY 0.062 . PcyM_0922300 316 NVHGMTK|YH 0.065 . PcyM_0922300 320 MTKYHQK|YV 0.111 . PcyM_0922300 325 QKYVSFR|IG 0.084 . PcyM_0922300 334 NSDAFER|KV 0.141 . PcyM_0922300 335 SDAFERK|VE 0.084 . PcyM_0922300 341 KVELIQR|DM 0.113 . PcyM_0922300 347 RDMNIQR|DQ 0.106 . PcyM_0922300 366 NVLDEVK|SY 0.068 . PcyM_0922300 384 FAFIFQK|IT 0.062 . PcyM_0922300 388 FQKITLK|NV 0.069 . PcyM_0922300 397 ASSGMDR|LF 0.095 . PcyM_0922300 400 GMDRLFK|MN 0.111 . PcyM_0922300 403 RLFKMNR|MN 0.088 . PcyM_0922300 409 RMNPINK|QQ 0.061 . PcyM_0922300 413 INKQQLK|TD 0.056 . PcyM_0922300 417 QLKTDVR|FS 0.114 . PcyM_0922300 425 SSVAGMK|QA 0.080 . PcyM_0922300 428 AGMKQAK|EE 0.070 . PcyM_0922300 439 EFVDFLR|SP 0.129 . PcyM_0922300 443 FLRSPSK|YE 0.067 . PcyM_0922300 450 YEALGAK|MP 0.065 . PcyM_0922300 453 LGAKMPK|GA 0.073 . PcyM_0922300 465 GAPGTGK|TL 0.057 . PcyM_0922300 470 GKTLLAK|AV 0.078 . PcyM_0922300 499 VGIGPSR|VR 0.069 . PcyM_0922300 501 IGPSRVR|EL 0.085 . PcyM_0922300 508 ELFAQAR|KH 0.087 . PcyM_0922300 509 LFAQARK|HA 0.087 . PcyM_0922300 525 EIDAVGR|KR 0.101 . PcyM_0922300 526 IDAVGRK|RS 0.083 . PcyM_0922300 527 DAVGRKR|SK 0.322 . PcyM_0922300 529 VGRKRSK|GG 0.075 . PcyM_0922300 540 GGGNDER|EN 0.077 . PcyM_0922300 569 VLAGTNR|VD 0.069 . PcyM_0922300 579 LDPAITR|PG 0.065 . PcyM_0922300 582 AITRPGR|FD 0.228 . PcyM_0922300 585 RPGRFDR|IV 0.579 *ProP* PcyM_0922300 591 RIVNISK|PD 0.060 . PcyM_0922300 597 KPDINER|SE 0.123 . PcyM_0922300 606 IFQVHLK|NL 0.057 . PcyM_0922300 609 VHLKNLK|LH 0.057 . PcyM_0922300 648 GAIQCAR|RS 0.093 . PcyM_0922300 649 AIQCARR|SN 0.268 . PcyM_0922300 658 MVGVQVK|DF 0.080 . PcyM_0922300 666 FELAIER|VI 0.082 . PcyM_0922300 673 VIGGLPK|SS 0.078 . PcyM_0922300 683 LISPLEK|KI 0.070 . PcyM_0922300 684 ISPLEKK|II 0.133 . PcyM_0922300 708 YADPVLK|VS 0.050 . PcyM_0922300 714 KVSILPR|SN 0.246 . PcyM_0922300 734 EIMLFSR|DA 0.093 . PcyM_0922300 740 RDAILDK|VA 0.063 . PcyM_0922300 748 AVILGGR|AA 0.086 . PcyM_0922300 757 EELFIGK|IT 0.064 . PcyM_0922300 768 AIDDLNK|VT 0.054 . PcyM_0922300 784 SQYGMNK|EI 0.071 . PcyM_0922300 803 SEYSFYR|PH 0.119 . PcyM_0922300 818 LIDNEVR|SL 0.115 . PcyM_0922300 827 IETQYNR|VK 0.077 . PcyM_0922300 829 TQYNRVK|SI 0.083 . PcyM_0922300 833 RVKSILR|KH 0.081 . PcyM_0922300 834 VKSILRK|HE 0.092 . PcyM_0922300 837 ILRKHEK|HV 0.101 . PcyM_0922300 841 HEKHVHK|LA 0.074 . PcyM_0922300 849 AELLFQK|ET 0.060 . PcyM_0922300 864 VQCIGER|PF 0.068 . PcyM_0922300 869 ERPFPVK|ST 0.100 . PcyM_0922300 874 VKSTYEK|FV 0.095 . PcyM_0922300 877 TYEKFVK|AN 0.068 . PcyM_0922300 882 VKANPYK|LV 0.138 . PcyM_0922300 913 GEGTGGK|GV 0.116 . PcyM_0922300 936 PNGEAEK|AT 0.064 . PcyM_0922300 955 STLGEPK|EA 0.073 . PcyM_0922300 966 EQHSTGK|RG 0.063 . PcyM_0922300 967 QHSTGKR|GP 0.181 . PcyM_0922300 983 NSDDGNK|GN 0.057 . PcyM_0922300 986 DGNKGNK|VS 0.064 . PcyM_0922300 994 SHVGTTR|-- 0.089 . ____________________________^_________________

  • Fasta :-

    >PcyM_0922300 ATGATGAACAGGACGCATATGCTGCTGAAAACCACGAGGGGTATTCCCAACAGTGGGATG ATGGGTCGTGGGGGCCTAGTGGAAGAGGTCCTATCGTGTAGGAGGTACTTGGGGATGCTT TTAAATGTGTCTCATTTTGGAGGGGCCGTGGAGGGGAGCGTCGTTGGAAGCGTCGTTGGA AGCTGCCCTGGAGGCGTCGTTGGAAGCGTCCGTGGAGGCGGCCCTGGAAGCGGCATGGTT AGTGGTAGCCGCAAAGGGGCGAGACGGCTGCTGCACGTTTTGAAGAAGTACATGAGGATC TGCTGCCGAGAGGGGGGTCTGAAAAAAGGGGAGCTGCCCAAACTGGATGAGGCAGCGCGG CGTTTGCTGCAGATGAGGGGGAGTACCCAGGTGTTCCCTGACGAGGGGAAACCCCGCGAT GAGCATTTCGCTAGGAAAGAGGCTTCGAAAGCACACATTGACGAAGAGAACCTCCCCAGT GGCGACTGGCGGATGAGGAGCAGCTCGCACAACTCGTTCCCTTCCCATAATGTATTTTTC CCCCCCCGAAAGTACGAGCAGTTAGCAACCGGTCTGCAACAAAACAGAAGGAAGTTCCAT CAGATGGTTCAAATGTACCTGTCCAAGGCACCGAAAGGGTTCGAAAATTTTGAGAAGAAA AATAAGAAGGAGGAAGGGTCTGCATCGTCATCATCATCGTCATCTTCGTCGAACTCGTTC AAACCCGATGAAGAAAAAAATAACAAAAAGTTCGACAATTTTTTTTTTTTTTTTTTCTTC ATGTTACTTTTATTCTTCTTCCTCTTCGTGGATTCGAATGGATTATACAACGAAGTTACA CAAAACGATTTTTTTATGAATTATTTGTCAAAGGGATATGTAGATAAAATTAAGCTTATC AATAAGGATTACGTAAAGGCCTACCTAAACGTTCATGGCATGACTAAGTATCACCAAAAG TATGTAAGTTTTCGGATAGGAAACAGTGATGCGTTTGAGCGTAAGGTGGAGCTTATCCAA AGAGATATGAACATACAAAGAGACCAGATAATAGAAGTACAATACACAAATGAAACGAAT GTATTGGATGAAGTAAAGAGTTACGTACCTACCATCTTGTTCTTCTTACTGTTCGCTTTT ATATTCCAAAAAATAACTCTAAAAAATGTAGCTAGTAGTGGTATGGATAGGTTATTCAAA ATGAACAGAATGAATCCAATAAATAAACAACAATTAAAAACAGATGTTAGATTCTCAAGC GTTGCTGGGATGAAACAAGCCAAAGAGGAAATTATGGAATTTGTAGATTTTTTGAGAAGT CCATCTAAGTATGAAGCGTTAGGAGCTAAGATGCCTAAGGGAGCTCTTCTATGTGGTGCC CCTGGGACAGGAAAAACGTTACTAGCTAAAGCTGTAGCAGGAGAAGCTAATGTACCTTTT TTTAACATAAGTGGTAGTGACTTTATCGAAGTTTTCGTTGGCATTGGTCCCTCTAGAGTC AGAGAATTATTTGCTCAAGCAAGAAAACATGCACCATCAATCATATTTATTGACGAAATA GATGCAGTAGGTAGAAAGAGATCTAAAGGTGGGTTCGCAGGAGGAGGAAATGATGAAAGA GAAAATACATTAAATCAAATGCTAGTAGAAATGGATGGGTTTCATACATCTAATGATAAT GTGGTAGTTTTGGCAGGAACTAATCGAGTTGATATTCTAGACCCAGCCATTACAAGACCG GGTAGATTTGATCGAATTGTTAATATAAGTAAGCCGGATATTAATGAAAGGTCTGAAATT TTTCAAGTTCATTTGAAGAACCTAAAATTACATCACACTTTGGATATACAAAGCATTAGC TACCTTTTAGCTTCTCTAACTCCAGGGTTTGTAGGTGCAGATATTGCAAATGTGGTGAAT GAAGGAGCCATTCAATGTGCTAGGAGATCGAACATGGTTGGGGTTCAGGTGAAAGACTTC GAATTAGCTATCGAAAGAGTAATTGGTGGATTACCCAAATCGTCTTCTCTTATCTCCCCA TTGGAAAAAAAAATTATTTCCTATCACGAAACAGGACATGCTCTCATCGGATGGCTACTC GAGTATGCTGACCCCGTTCTGAAGGTATCCATTTTACCAAGAAGTAATGGAGCCCTGGGT TACTCACAACATTTGTCAGAAGAAATTATGCTTTTTTCGAGAGATGCCATTTTGGATAAA GTAGCTGTGATTTTAGGAGGAAGGGCAGCTGAAGAATTATTTATCGGAAAAATCACCACA GGTGCTATTGACGATTTAAATAAAGTCACTCAGCTATCCTATTCCTACGTCTCTCAATAC GGAATGAACAAAGAAATCGGACTAGTATCGTTTCAGCCGAACTCCTCAAGTGAGTACAGC TTTTACAGACCCCACTCTGAGTGCCTAGCGCATCTCATAGACAACGAGGTGCGCAGTCTC ATTGAGACTCAGTACAACCGGGTGAAATCCATTTTGCGTAAGCATGAGAAACATGTGCAT AAGCTAGCTGAGTTGCTTTTCCAGAAGGAAACCATCTCCTACCAGGACATTGTGCAGTGC ATCGGGGAGCGCCCCTTCCCGGTTAAGTCCACCTACGAGAAGTTCGTTAAGGCGAACCCG TACAAGTTGGTCGGCGCAGGCGAGGGGATTGGCGGTGAGGGGATTGGCGGCGAGGGAATT GGCGGTGAGGGAGTCGGCGGTGAGGGAACTGGCGGCAAGGGAGTCGGCGGAGAGGGGGGT AACGTTGTAGCTACTGTAGGGGTACCCCCTAATGGGGAGGCCGAGAAAGCCACACAGGGC ACGCATAGTGCGCAGAGCACGCAGAGCACGCTGGGCGAACCAAAGGAAGCGCTCGCGGAA CAGCACAGCACGGGGAAAAGGGGGCCAGCCGAGGAGGCCGCCGGGGAAAACTCCGATGAT GGGAACAAGGGCAACAAGGTTTCTCACGTGGGCACCACACGCTGA
  • Download Fasta

  • Fasta :-

    MMNRTHMLLKTTRGIPNSGMMGRGGLVEEVLSCRRYLGMLLNVSHFGGAVEGSVVGSVVG SCPGGVVGSVRGGGPGSGMVSGSRKGARRLLHVLKKYMRICCREGGLKKGELPKLDEAAR RLLQMRGSTQVFPDEGKPRDEHFARKEASKAHIDEENLPSGDWRMRSSSHNSFPSHNVFF PPRKYEQLATGLQQNRRKFHQMVQMYLSKAPKGFENFEKKNKKEEGSASSSSSSSSSNSF KPDEEKNNKKFDNFFFFFFFMLLLFFFLFVDSNGLYNEVTQNDFFMNYLSKGYVDKIKLI NKDYVKAYLNVHGMTKYHQKYVSFRIGNSDAFERKVELIQRDMNIQRDQIIEVQYTNETN VLDEVKSYVPTILFFLLFAFIFQKITLKNVASSGMDRLFKMNRMNPINKQQLKTDVRFSS VAGMKQAKEEIMEFVDFLRSPSKYEALGAKMPKGALLCGAPGTGKTLLAKAVAGEANVPF FNISGSDFIEVFVGIGPSRVRELFAQARKHAPSIIFIDEIDAVGRKRSKGGFAGGGNDER ENTLNQMLVEMDGFHTSNDNVVVLAGTNRVDILDPAITRPGRFDRIVNISKPDINERSEI FQVHLKNLKLHHTLDIQSISYLLASLTPGFVGADIANVVNEGAIQCARRSNMVGVQVKDF ELAIERVIGGLPKSSSLISPLEKKIISYHETGHALIGWLLEYADPVLKVSILPRSNGALG YSQHLSEEIMLFSRDAILDKVAVILGGRAAEELFIGKITTGAIDDLNKVTQLSYSYVSQY GMNKEIGLVSFQPNSSSEYSFYRPHSECLAHLIDNEVRSLIETQYNRVKSILRKHEKHVH KLAELLFQKETISYQDIVQCIGERPFPVKSTYEKFVKANPYKLVGAGEGIGGEGIGGEGI GGEGVGGEGTGGKGVGGEGGNVVATVGVPPNGEAEKATQGTHSAQSTQSTLGEPKEALAE QHSTGKRGPAEEAAGENSDDGNKGNKVSHVGTTR

  • title: ATP binding site
  • coordinates: A460,P461,G462,T463,G464,K465,T466,L467,D518,N568
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0922300393 SNVASSGMDR0.993unspPcyM_0922300393 SNVASSGMDR0.993unspPcyM_0922300393 SNVASSGMDR0.993unspPcyM_0922300419 SDVRFSSVAG0.99unspPcyM_0922300442 SLRSPSKYEA0.996unspPcyM_0922300679 SSSLISPLEK0.991unspPcyM_0922300235 SSSSSSSSNS0.994unspPcyM_0922300239 SSSSNSFKPD0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India