PcyM_0933300 | GPI-anchor transamidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_0933300SP0.0254950.9724000.002104CS pos: 18-19. KHA-VA. Pr: 0.3353
No Results

  • Fasta :-

    >PcyM_0933300 MELKKAFLCCVLLAVKHAVAPSVYFSGLDIKNMKGKYKEIEERHAKQNVNDIFFRELKKS NYQVNSNIIVLSTSRHYFNYRHTSNLLTAYKYLKHVGDNMDRNILLMVPFDQACNCRNIV EGTIFNEYEKPPSEDLKKKKMKENLYSHLNIDYKNDNIRDEQIRRVIRHRYDALTPAKYR LYTNGNREKNLFIYMTGHGGVSFFKIQDFNIVSSAEFSLYIQELLIKNIYKYIFVIIDTC QGYSFYDKVLDFLKKNKINNVFLMSSSDKNENSYSLHSSKYLSVSTVDRFTFYFFSYLEN MNRIYTHEPHKNAKAFSLYTILNYLKTQHLISTPTINNSKFSASMFMHSKNILFYDSSGF YVSKDAEESALDGLGKHSYNVSQKADKTAIRSSCLGDLSACGHMKNEIYTHMGNLYSRSS FYNNVEVYFKEESHFTDYYFTSERFAGGYLLPAFLFLVVIALCLLFFLFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0933300.fa Sequence name : PcyM_0933300 Sequence length : 470 VALUES OF COMPUTED PARAMETERS Coef20 : 4.416 CoefTot : -0.073 ChDiff : 13 ZoneTo : 28 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.871 3.282 0.625 1.043 MesoH : -0.218 0.415 -0.321 0.288 MuHd_075 : 15.011 16.232 7.981 4.093 MuHd_095 : 27.289 20.301 7.873 6.478 MuHd_100 : 23.240 15.513 6.159 4.794 MuHd_105 : 16.188 13.457 4.146 3.463 Hmax_075 : 14.400 21.350 5.139 6.277 Hmax_095 : 17.063 22.137 4.859 6.239 Hmax_100 : 11.500 23.600 1.922 4.530 Hmax_105 : 11.550 17.033 3.361 5.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9810 0.0190 DFMC : 0.9892 0.0108
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 470 PcyM_0933300 MELKKAFLCCVLLAVKHAVAPSVYFSGLDIKNMKGKYKEIEERHAKQNVNDIFFRELKKSNYQVNSNIIVLSTSRHYFNY 80 RHTSNLLTAYKYLKHVGDNMDRNILLMVPFDQACNCRNIVEGTIFNEYEKPPSEDLKKKKMKENLYSHLNIDYKNDNIRD 160 EQIRRVIRHRYDALTPAKYRLYTNGNREKNLFIYMTGHGGVSFFKIQDFNIVSSAEFSLYIQELLIKNIYKYIFVIIDTC 240 QGYSFYDKVLDFLKKNKINNVFLMSSSDKNENSYSLHSSKYLSVSTVDRFTFYFFSYLENMNRIYTHEPHKNAKAFSLYT 320 ILNYLKTQHLISTPTINNSKFSASMFMHSKNILFYDSSGFYVSKDAEESALDGLGKHSYNVSQKADKTAIRSSCLGDLSA 400 CGHMKNEIYTHMGNLYSRSSFYNNVEVYFKEESHFTDYYFTSERFAGGYLLPAFLFLVVIALCLLFFLFT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0933300 4 ---MELK|KA 0.059 . PcyM_0933300 5 --MELKK|AF 0.080 . PcyM_0933300 16 CVLLAVK|HA 0.052 . PcyM_0933300 31 FSGLDIK|NM 0.058 . PcyM_0933300 34 LDIKNMK|GK 0.071 . PcyM_0933300 36 IKNMKGK|YK 0.126 . PcyM_0933300 38 NMKGKYK|EI 0.073 . PcyM_0933300 43 YKEIEER|HA 0.115 . PcyM_0933300 46 IEERHAK|QN 0.121 . PcyM_0933300 55 VNDIFFR|EL 0.101 . PcyM_0933300 58 IFFRELK|KS 0.103 . PcyM_0933300 59 FFRELKK|SN 0.138 . PcyM_0933300 75 IVLSTSR|HY 0.086 . PcyM_0933300 81 RHYFNYR|HT 0.122 . PcyM_0933300 91 NLLTAYK|YL 0.075 . PcyM_0933300 94 TAYKYLK|HV 0.102 . PcyM_0933300 102 VGDNMDR|NI 0.069 . PcyM_0933300 117 DQACNCR|NI 0.096 . PcyM_0933300 130 IFNEYEK|PP 0.062 . PcyM_0933300 137 PPSEDLK|KK 0.073 . PcyM_0933300 138 PSEDLKK|KK 0.094 . PcyM_0933300 139 SEDLKKK|KM 0.113 . PcyM_0933300 140 EDLKKKK|MK 0.124 . PcyM_0933300 142 LKKKKMK|EN 0.072 . PcyM_0933300 154 HLNIDYK|ND 0.065 . PcyM_0933300 159 YKNDNIR|DE 0.099 . PcyM_0933300 164 IRDEQIR|RV 0.122 . PcyM_0933300 165 RDEQIRR|VI 0.111 . PcyM_0933300 168 QIRRVIR|HR 0.274 . PcyM_0933300 170 RRVIRHR|YD 0.086 . PcyM_0933300 178 DALTPAK|YR 0.056 . PcyM_0933300 180 LTPAKYR|LY 0.090 . PcyM_0933300 187 LYTNGNR|EK 0.067 . PcyM_0933300 189 TNGNREK|NL 0.077 . PcyM_0933300 205 GGVSFFK|IQ 0.064 . PcyM_0933300 227 IQELLIK|NI 0.065 . PcyM_0933300 231 LIKNIYK|YI 0.092 . PcyM_0933300 248 GYSFYDK|VL 0.064 . PcyM_0933300 254 KVLDFLK|KN 0.054 . PcyM_0933300 255 VLDFLKK|NK 0.084 . PcyM_0933300 257 DFLKKNK|IN 0.066 . PcyM_0933300 269 LMSSSDK|NE 0.063 . PcyM_0933300 280 YSLHSSK|YL 0.078 . PcyM_0933300 289 SVSTVDR|FT 0.123 . PcyM_0933300 303 YLENMNR|IY 0.081 . PcyM_0933300 311 YTHEPHK|NA 0.062 . PcyM_0933300 314 EPHKNAK|AF 0.078 . PcyM_0933300 326 TILNYLK|TQ 0.053 . PcyM_0933300 340 PTINNSK|FS 0.065 . PcyM_0933300 350 SMFMHSK|NI 0.062 . PcyM_0933300 364 SGFYVSK|DA 0.092 . PcyM_0933300 376 ALDGLGK|HS 0.062 . PcyM_0933300 384 SYNVSQK|AD 0.083 . PcyM_0933300 387 VSQKADK|TA 0.067 . PcyM_0933300 391 ADKTAIR|SS 0.116 . PcyM_0933300 405 SACGHMK|NE 0.065 . PcyM_0933300 418 MGNLYSR|SS 0.125 . PcyM_0933300 430 NVEVYFK|EE 0.061 . PcyM_0933300 444 YYFTSER|FA 0.127 . ____________________________^_________________

  • Fasta :-

    >PcyM_0933300 ATGGAGCTGAAGAAGGCGTTCCTGTGCTGCGTGCTACTGGCAGTCAAACACGCAGTTGCG CCCTCAGTATACTTCTCCGGTTTGGACATAAAAAATATGAAAGGAAAATACAAAGAGATA GAAGAGAGGCATGCCAAACAAAATGTGAATGATATATTTTTTCGTGAATTAAAAAAATCG AATTATCAAGTGAACAGTAATATTATCGTACTGAGCACATCGAGACATTATTTCAACTAC AGACACACAAGCAATTTACTGACCGCATATAAATACTTGAAGCATGTTGGGGACAATATG GATAGAAACATACTGCTTATGGTACCATTTGACCAAGCTTGCAATTGTAGGAATATTGTA GAAGGCACCATTTTTAATGAGTATGAGAAGCCTCCAAGTGAAGATTTAAAAAAAAAAAAA ATGAAAGAAAATTTGTACAGCCATTTAAATATAGACTATAAAAATGACAATATACGAGAT GAACAAATAAGGAGAGTAATTAGACATCGATATGATGCCTTAACTCCAGCTAAATATAGG TTATACACAAATGGGAACAGAGAGAAAAATCTTTTTATATACATGACTGGCCATGGAGGA GTGTCATTTTTTAAAATTCAAGATTTCAACATTGTCAGCTCTGCTGAATTTAGCCTGTAC ATACAAGAGTTGCTCATAAAAAATATATACAAGTACATTTTTGTAATTATTGACACGTGT CAAGGGTACAGTTTTTACGATAAAGTGCTAGATTTTTTAAAAAAAAATAAAATAAATAAC GTCTTTTTAATGTCCTCTTCGGATAAGAACGAAAATAGTTACAGCTTACACTCGAGCAAA TATTTAAGTGTCTCGACGGTCGATCGATTTACGTTTTATTTTTTTTCCTACCTGGAAAAT ATGAACAGAATATACACACACGAACCGCATAAAAATGCCAAGGCCTTTTCCTTATATACC ATCTTGAATTATTTAAAAACACAACATTTGATATCAACTCCAACCATCAACAATTCGAAA TTTAGCGCATCCATGTTTATGCATAGTAAAAATATTCTTTTTTATGACTCCTCCGGTTTT TATGTAAGTAAAGACGCGGAGGAGAGTGCGTTGGATGGGCTGGGCAAGCACAGTTATAAT GTCAGCCAGAAGGCAGACAAAACTGCAATTCGAAGTTCATGTTTGGGCGACTTGAGCGCA TGTGGGCATATGAAAAATGAAATATACACCCACATGGGGAACCTGTACTCGCGCAGCAGC TTCTACAACAACGTCGAGGTTTACTTCAAGGAGGAGTCCCACTTCACGGACTACTACTTT ACCTCCGAGCGTTTTGCTGGGGGGTACTTGCTCCCTGCTTTCCTTTTTTTAGTGGTGATC GCGTTATGCTTGCTCTTTTTTCTGTTCACGTAG
  • Download Fasta

  • Fasta :-

    MELKKAFLCCVLLAVKHAVAPSVYFSGLDIKNMKGKYKEIEERHAKQNVNDIFFRELKKS NYQVNSNIIVLSTSRHYFNYRHTSNLLTAYKYLKHVGDNMDRNILLMVPFDQACNCRNIV EGTIFNEYEKPPSEDLKKKKMKENLYSHLNIDYKNDNIRDEQIRRVIRHRYDALTPAKYR LYTNGNREKNLFIYMTGHGGVSFFKIQDFNIVSSAEFSLYIQELLIKNIYKYIFVIIDTC QGYSFYDKVLDFLKKNKINNVFLMSSSDKNENSYSLHSSKYLSVSTVDRFTFYFFSYLEN MNRIYTHEPHKNAKAFSLYTILNYLKTQHLISTPTINNSKFSASMFMHSKNILFYDSSGF YVSKDAEESALDGLGKHSYNVSQKADKTAIRSSCLGDLSACGHMKNEIYTHMGNLYSRSS FYNNVEVYFKEESHFTDYYFTSERFAGGYLLPAFLFLVVIALCLLFFLFT

    No Results
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IDSitePeptideScoreMethod
PcyM_0933300420 SYSRSSFYNN0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India