PcyM_0935100 | 26S protease regulatory subunit 6a, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_0935100OTHER0.9999930.0000030.000004
No Results

  • Fasta :-

    >PcyM_0935100 MNVENIFPNNDVNVEEIEKLTNSEIRTRISLIDTEIKILKNEHTRLKNEYKSLQEKIKDN VEKIHLNKMLPYLVANVVESLDLDDDEDESNEPKDEYDLYVNNSKGNNDEGFRDIDDEKR GKCMVIKTSTRQTIFLPVPGLIEASELKPGDLVGVNKDSYLIIDKLPPEYDNRVKAMEVI EKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLAR ACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDS ELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPN EESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHE DFVEGITSVLSKKKSTLNYFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_0935100.fa Sequence name : PcyM_0935100 Sequence length : 441 VALUES OF COMPUTED PARAMETERS Coef20 : 3.021 CoefTot : -0.134 ChDiff : -19 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.829 1.012 -0.103 0.465 MesoH : -0.580 0.277 -0.410 0.197 MuHd_075 : 18.004 15.865 5.642 4.729 MuHd_095 : 10.901 10.414 2.978 2.524 MuHd_100 : 17.503 15.831 5.553 3.976 MuHd_105 : 21.020 17.449 6.668 4.475 Hmax_075 : 2.200 7.100 -1.587 3.400 Hmax_095 : -2.362 8.487 -2.281 3.412 Hmax_100 : 5.500 13.200 -0.165 4.680 Hmax_105 : 5.500 13.200 -0.165 4.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9747 0.0253 DFMC : 0.9669 0.0331
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 441 PcyM_0935100 MNVENIFPNNDVNVEEIEKLTNSEIRTRISLIDTEIKILKNEHTRLKNEYKSLQEKIKDNVEKIHLNKMLPYLVANVVES 80 LDLDDDEDESNEPKDEYDLYVNNSKGNNDEGFRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIEASELKPGDLVGVNKDSY 160 LIIDKLPPEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLAR 240 ACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLD 320 GFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKA 400 VCVEAGMIALRRGATEIDHEDFVEGITSVLSKKKSTLNYFT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ......................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_0935100 19 NVEEIEK|LT 0.058 . PcyM_0935100 26 LTNSEIR|TR 0.096 . PcyM_0935100 28 NSEIRTR|IS 0.073 . PcyM_0935100 37 LIDTEIK|IL 0.057 . PcyM_0935100 40 TEIKILK|NE 0.064 . PcyM_0935100 45 LKNEHTR|LK 0.087 . PcyM_0935100 47 NEHTRLK|NE 0.065 . PcyM_0935100 51 RLKNEYK|SL 0.102 . PcyM_0935100 56 YKSLQEK|IK 0.083 . PcyM_0935100 58 SLQEKIK|DN 0.087 . PcyM_0935100 63 IKDNVEK|IH 0.063 . PcyM_0935100 68 EKIHLNK|ML 0.062 . PcyM_0935100 94 DESNEPK|DE 0.071 . PcyM_0935100 105 LYVNNSK|GN 0.065 . PcyM_0935100 113 NNDEGFR|DI 0.120 . PcyM_0935100 119 RDIDDEK|RG 0.053 . PcyM_0935100 120 DIDDEKR|GK 0.176 . PcyM_0935100 122 DDEKRGK|CM 0.059 . PcyM_0935100 127 GKCMVIK|TS 0.070 . PcyM_0935100 131 VIKTSTR|QT 0.078 . PcyM_0935100 148 IEASELK|PG 0.062 . PcyM_0935100 157 DLVGVNK|DS 0.072 . PcyM_0935100 165 SYLIIDK|LP 0.051 . PcyM_0935100 173 PPEYDNR|VK 0.071 . PcyM_0935100 175 EYDNRVK|AM 0.069 . PcyM_0935100 182 AMEVIEK|PS 0.066 . PcyM_0935100 195 DIGGLDK|QI 0.070 . PcyM_0935100 211 VLPMLHK|EK 0.060 . PcyM_0935100 213 PMLHKEK|FE 0.066 . PcyM_0935100 216 HKEKFEK|IG 0.065 . PcyM_0935100 220 FEKIGIK|PP 0.070 . PcyM_0935100 223 IGIKPPK|GV 0.100 . PcyM_0935100 235 GPPGTGK|TL 0.059 . PcyM_0935100 240 GKTLLAR|AC 0.090 . PcyM_0935100 252 TNATFLK|LA 0.118 . PcyM_0935100 268 FIGDGAK|MV 0.085 . PcyM_0935100 271 DGAKMVR|DA 0.122 . PcyM_0935100 278 DAFNLAK|EK 0.067 . PcyM_0935100 280 FNLAKEK|AP 0.061 . PcyM_0935100 296 LDAIGTK|RF 0.062 . PcyM_0935100 297 DAIGTKR|FD 0.174 . PcyM_0935100 306 SELSGDR|EV 0.080 . PcyM_0935100 310 GDREVQR|TM 0.096 . PcyM_0935100 329 STDDTVK|VI 0.057 . PcyM_0935100 336 VIAATNR|PD 0.077 . PcyM_0935100 346 LDPALLR|SG 0.086 . PcyM_0935100 349 ALLRSGR|LD 0.220 . PcyM_0935100 352 RSGRLDR|KI 0.247 . PcyM_0935100 353 SGRLDRK|IE 0.071 . PcyM_0935100 364 HPNEESR|AR 0.108 . PcyM_0935100 366 NEESRAR|IL 0.090 . PcyM_0935100 373 ILQIHSR|KM 0.090 . PcyM_0935100 374 LQIHSRK|MN 0.092 . PcyM_0935100 379 RKMNVHK|DV 0.132 . PcyM_0935100 388 NFEELAR|ST 0.126 . PcyM_0935100 399 FNGAQLK|AV 0.088 . PcyM_0935100 411 AGMIALR|RG 0.095 . PcyM_0935100 412 GMIALRR|GA 0.209 . PcyM_0935100 432 ITSVLSK|KK 0.073 . PcyM_0935100 433 TSVLSKK|KS 0.096 . PcyM_0935100 434 SVLSKKK|ST 0.150 . ____________________________^_________________

  • Fasta :-

    >PcyM_0935100 ATGAACGTGGAGAATATCTTCCCCAACAATGACGTAAACGTGGAGGAAATCGAGAAGCTC ACGAATAGCGAAATCAGAACGAGGATCAGCTTGATCGACACGGAAATTAAAATATTAAAA AATGAGCACACGAGATTGAAGAATGAGTACAAGAGTCTACAAGAAAAGATAAAGGACAAT GTGGAAAAAATACATCTAAATAAGATGCTCCCGTACTTGGTTGCAAATGTAGTAGAATCG CTAGATCTGGATGATGATGAGGATGAATCAAATGAACCCAAAGATGAATATGATCTATAT GTGAATAATTCAAAAGGAAATAACGATGAAGGTTTTAGAGACATAGATGATGAAAAGAGA GGAAAATGTATGGTTATAAAAACATCAACCAGGCAAACTATTTTCTTACCTGTTCCTGGT TTGATAGAAGCATCAGAATTAAAACCAGGAGATCTGGTAGGAGTGAACAAGGACAGCTAT CTCATTATAGATAAACTACCTCCCGAATATGACAATAGAGTAAAAGCTATGGAAGTTATA GAAAAACCATCTGAAGATTATTCAGATATTGGAGGGTTAGATAAACAGATAGAGGACTTG GTGGAAGCAATTGTGTTACCTATGCTACATAAGGAGAAGTTTGAAAAAATTGGGATCAAG CCACCTAAAGGAGTTTTGATGCATGGTCCTCCAGGTACAGGGAAGACATTACTAGCTAGA GCTTGTGCTTCACAAACTAATGCCACTTTTTTAAAGCTAGCTGGTCCACAGCTTGTTCAG ATGTTTATTGGTGATGGAGCCAAAATGGTGAGAGATGCGTTTAACTTAGCTAAGGAAAAG GCACCTGCCATTATTTTCATCGATGAGTTAGATGCAATAGGAACCAAACGATTCGATAGT GAACTGTCTGGTGATAGGGAGGTCCAAAGAACCATGCTTGAGTTACTAAACCAGCTAGAC GGCTTCAGCACGGATGATACTGTTAAAGTTATTGCTGCGACGAATAGACCGGACACGCTA GATCCCGCTCTACTTCGATCCGGTAGACTAGACAGAAAAATCGAACTACCTCACCCTAAT GAAGAATCAAGAGCAAGAATTTTGCAAATTCATTCTCGAAAAATGAACGTCCACAAGGAT GTCAATTTTGAGGAGTTGGCTCGATCCACTGACGACTTTAATGGGGCCCAACTCAAGGCT GTTTGTGTGGAGGCAGGGATGATTGCCCTTAGGCGGGGCGCCACGGAGATCGACCACGAG GACTTCGTCGAGGGGATCACTTCCGTCCTCTCCAAGAAGAAGAGCACACTCAATTATTTC ACCTAG
  • Download Fasta

  • Fasta :-

    MNVENIFPNNDVNVEEIEKLTNSEIRTRISLIDTEIKILKNEHTRLKNEYKSLQEKIKDN VEKIHLNKMLPYLVANVVESLDLDDDEDESNEPKDEYDLYVNNSKGNNDEGFRDIDDEKR GKCMVIKTSTRQTIFLPVPGLIEASELKPGDLVGVNKDSYLIIDKLPPEYDNRVKAMEVI EKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLAR ACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDS ELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPN EESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHE DFVEGITSVLSKKKSTLNYFT

  • title: ATP binding site
  • coordinates: P230,P231,G232,T233,G234,K235,T236,L237,D288,N335
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_0935100431 STSVLSKKKS0.995unspPcyM_0935100431 STSVLSKKKS0.995unspPcyM_0935100431 STSVLSKKKS0.995unspPcyM_093510030 SRTRISLIDT0.998unspPcyM_0935100300 SKRFDSELSG0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India