PcyM_1008700 | mitochondrial processing peptidase alpha subunit, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1008700OTHER0.9930000.0000190.006981
No Results

  • Fasta :-

    >PcyM_1008700 MNGNVQKFKIVLCRNKPGKQLYSSEALKLKRNPNLEKLYSGEKQNLTKVTFKKEKIEDII KEVKFDYYYFNEGKKNTYRDIPLNIAVIKESELPAFKQVDEKLHFSVLENDLRIISTNKN NSVCSIGLYVKCGSRYEEINDQVNEQGMSVMLENMAFHSTAHLSHLRTIKSLEKIGANVS CNAFREHIVYTCECLKEYLPVVTNLLIGNVLFPRFLSWEMKNNVNRLNTMRTKLFENNEL YITELLHNTAWYNNTLGNKLYVCESSVENYTASNLRNFMLKHFSPKNMTLVGVNVDHEEL TKWTSRAFQDYVSVPYTSQKEVTPKYTGGFVSVEDKNVKKTNIAIAYETKGGWKTSDMIT LTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNNYNFIESCMAFSTQHSDTGLFGLYFTG EPANTMDIINAMALEFQKMNKVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILN RVLSGKQLCDAIDAVTKEDINRIVGHFLKTKPTVVVYGNINHSPHYDEICKILG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1008700.fa Sequence name : PcyM_1008700 Sequence length : 534 VALUES OF COMPUTED PARAMETERS Coef20 : 3.426 CoefTot : -1.471 ChDiff : 9 ZoneTo : 24 KR : 5 DE : 0 CleavSite : 16 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.688 1.347 0.160 0.531 MesoH : 0.237 0.333 -0.231 0.277 MuHd_075 : 23.055 13.231 7.004 5.665 MuHd_095 : 12.765 10.010 5.591 2.816 MuHd_100 : 12.836 9.880 3.924 3.189 MuHd_105 : 17.544 13.343 5.533 4.964 Hmax_075 : 9.200 5.000 2.060 3.270 Hmax_095 : -2.888 5.075 -1.454 1.269 Hmax_100 : 5.500 9.900 -1.733 3.580 Hmax_105 : 7.200 6.533 -0.517 4.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8730 0.1270 DFMC : 0.7651 0.2349
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 534 PcyM_1008700 MNGNVQKFKIVLCRNKPGKQLYSSEALKLKRNPNLEKLYSGEKQNLTKVTFKKEKIEDIIKEVKFDYYYFNEGKKNTYRD 80 IPLNIAVIKESELPAFKQVDEKLHFSVLENDLRIISTNKNNSVCSIGLYVKCGSRYEEINDQVNEQGMSVMLENMAFHST 160 AHLSHLRTIKSLEKIGANVSCNAFREHIVYTCECLKEYLPVVTNLLIGNVLFPRFLSWEMKNNVNRLNTMRTKLFENNEL 240 YITELLHNTAWYNNTLGNKLYVCESSVENYTASNLRNFMLKHFSPKNMTLVGVNVDHEELTKWTSRAFQDYVSVPYTSQK 320 EVTPKYTGGFVSVEDKNVKKTNIAIAYETKGGWKTSDMITLTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNNYNFIES 400 CMAFSTQHSDTGLFGLYFTGEPANTMDIINAMALEFQKMNKVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILN 480 RVLSGKQLCDAIDAVTKEDINRIVGHFLKTKPTVVVYGNINHSPHYDEICKILG 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1008700 7 MNGNVQK|FK 0.071 . PcyM_1008700 9 GNVQKFK|IV 0.075 . PcyM_1008700 14 FKIVLCR|NK 0.088 . PcyM_1008700 16 IVLCRNK|PG 0.057 . PcyM_1008700 19 CRNKPGK|QL 0.099 . PcyM_1008700 28 YSSEALK|LK 0.058 . PcyM_1008700 30 SEALKLK|RN 0.063 . PcyM_1008700 31 EALKLKR|NP 0.099 . PcyM_1008700 37 RNPNLEK|LY 0.066 . PcyM_1008700 43 KLYSGEK|QN 0.057 . PcyM_1008700 48 EKQNLTK|VT 0.079 . PcyM_1008700 52 LTKVTFK|KE 0.059 . PcyM_1008700 53 TKVTFKK|EK 0.106 . PcyM_1008700 55 VTFKKEK|IE 0.067 . PcyM_1008700 61 KIEDIIK|EV 0.060 . PcyM_1008700 64 DIIKEVK|FD 0.061 . PcyM_1008700 74 YYFNEGK|KN 0.054 . PcyM_1008700 75 YFNEGKK|NT 0.084 . PcyM_1008700 79 GKKNTYR|DI 0.114 . PcyM_1008700 89 LNIAVIK|ES 0.061 . PcyM_1008700 97 SELPAFK|QV 0.083 . PcyM_1008700 102 FKQVDEK|LH 0.065 . PcyM_1008700 113 VLENDLR|II 0.087 . PcyM_1008700 119 RIISTNK|NN 0.061 . PcyM_1008700 131 SIGLYVK|CG 0.062 . PcyM_1008700 135 YVKCGSR|YE 0.072 . PcyM_1008700 167 AHLSHLR|TI 0.079 . PcyM_1008700 170 SHLRTIK|SL 0.302 . PcyM_1008700 174 TIKSLEK|IG 0.056 . PcyM_1008700 185 VSCNAFR|EH 0.085 . PcyM_1008700 196 YTCECLK|EY 0.057 . PcyM_1008700 214 GNVLFPR|FL 0.124 . PcyM_1008700 221 FLSWEMK|NN 0.075 . PcyM_1008700 226 MKNNVNR|LN 0.096 . PcyM_1008700 231 NRLNTMR|TK 0.077 . PcyM_1008700 233 LNTMRTK|LF 0.067 . PcyM_1008700 259 NNTLGNK|LY 0.051 . PcyM_1008700 276 YTASNLR|NF 0.075 . PcyM_1008700 281 LRNFMLK|HF 0.110 . PcyM_1008700 286 LKHFSPK|NM 0.076 . PcyM_1008700 302 DHEELTK|WT 0.070 . PcyM_1008700 306 LTKWTSR|AF 0.097 . PcyM_1008700 320 VPYTSQK|EV 0.093 . PcyM_1008700 325 QKEVTPK|YT 0.094 . PcyM_1008700 336 FVSVEDK|NV 0.078 . PcyM_1008700 339 VEDKNVK|KT 0.063 . PcyM_1008700 340 EDKNVKK|TN 0.101 . PcyM_1008700 350 AIAYETK|GG 0.068 . PcyM_1008700 354 ETKGGWK|TS 0.061 . PcyM_1008700 381 STGGPGK|GM 0.067 . PcyM_1008700 386 GKGMYSR|LF 0.097 . PcyM_1008700 438 MALEFQK|MN 0.058 . PcyM_1008700 441 EFQKMNK|VT 0.070 . PcyM_1008700 449 TDEELNR|AK 0.072 . PcyM_1008700 451 EELNRAK|KS 0.064 . PcyM_1008700 452 ELNRAKK|SL 0.483 . PcyM_1008700 455 RAKKSLK|SF 0.078 . PcyM_1008700 465 WMSLEYK|SI 0.081 . PcyM_1008700 474 LMEDLAR|QM 0.080 . PcyM_1008700 481 QMMILNR|VL 0.098 . PcyM_1008700 486 NRVLSGK|QL 0.095 . PcyM_1008700 497 AIDAVTK|ED 0.059 . PcyM_1008700 502 TKEDINR|IV 0.185 . PcyM_1008700 509 IVGHFLK|TK 0.061 . PcyM_1008700 511 GHFLKTK|PT 0.070 . PcyM_1008700 531 HYDEICK|IL 0.065 . ____________________________^_________________

  • Fasta :-

    >PcyM_1008700 ATGAACGGAAACGTACAAAAGTTCAAAATAGTTCTGTGTAGGAACAAACCGGGGAAACAA CTATACAGTAGTGAAGCCCTAAAACTTAAGAGAAATCCCAACTTAGAAAAATTATACTCA GGGGAAAAACAGAATTTGACAAAAGTCACATTCAAGAAGGAGAAAATTGAAGACATCATT AAAGAAGTGAAATTTGATTACTACTATTTTAATGAAGGGAAGAAAAACACGTATAGAGAC ATCCCCCTCAACATTGCTGTCATAAAGGAGTCGGAGTTGCCTGCCTTCAAGCAGGTTGAT GAGAAGTTACATTTCTCAGTTTTGGAAAATGACCTCAGGATTATTTCCACTAACAAGAAC AACAGCGTTTGTTCAATAGGGCTGTACGTGAAGTGCGGGTCCAGGTACGAAGAAATAAAC GACCAGGTGAACGAGCAGGGAATGAGCGTGATGCTCGAAAACATGGCGTTCCACAGCACA GCGCACCTGTCCCACCTGAGGACGATCAAATCGCTGGAAAAAATAGGGGCGAACGTAAGC TGCAACGCGTTTCGTGAGCACATAGTGTACACCTGCGAATGCTTGAAGGAGTACCTACCC GTAGTGACAAACTTACTAATCGGAAACGTCTTATTTCCTCGCTTCCTATCATGGGAAATG AAAAATAATGTAAATCGACTCAACACCATGCGCACCAAGTTATTTGAAAACAACGAACTG TACATAACCGAACTTCTGCACAACACCGCATGGTATAATAACACCTTAGGAAATAAGCTG TATGTGTGTGAATCTAGTGTAGAGAATTACACTGCCAGTAATTTAAGAAATTTTATGCTC AAACATTTTTCTCCAAAAAATATGACCCTAGTTGGTGTCAATGTAGACCATGAGGAATTA ACCAAATGGACATCAAGAGCATTTCAAGATTATGTCTCCGTACCATATACAAGCCAGAAG GAAGTGACTCCAAAATATACAGGTGGATTTGTAAGCGTAGAAGATAAAAATGTTAAAAAA ACTAACATTGCTATAGCGTATGAAACGAAAGGTGGTTGGAAGACATCAGACATGATTACA CTAACTGTGTTGCAAACCCTCATGGGTGGAGGTGGTTCTTTTTCCACGGGAGGACCAGGA AAAGGAATGTACTCTAGATTATTCCTAAATGTTTTGAACAACTATAATTTTATAGAATCT TGTATGGCCTTTAGTACACAACATTCAGATACGGGTTTGTTTGGACTATACTTCACTGGG GAACCAGCCAACACGATGGACATAATAAATGCTATGGCTTTGGAGTTTCAGAAAATGAAT AAAGTTACCGATGAAGAATTAAATAGAGCAAAGAAAAGTTTGAAAAGCTTTATGTGGATG AGCTTAGAGTATAAGTCCATACTAATGGAAGACTTGGCTAGACAAATGATGATTCTAAAT CGGGTTCTCTCTGGAAAACAGCTATGTGATGCTATAGATGCAGTAACGAAGGAAGACATA AACCGGATCGTAGGGCACTTTTTGAAAACCAAGCCAACGGTTGTTGTCTATGGCAACATT AACCATTCTCCTCACTACGACGAAATATGCAAAATTTTGGGCTAA
  • Download Fasta

  • Fasta :-

    MNGNVQKFKIVLCRNKPGKQLYSSEALKLKRNPNLEKLYSGEKQNLTKVTFKKEKIEDII KEVKFDYYYFNEGKKNTYRDIPLNIAVIKESELPAFKQVDEKLHFSVLENDLRIISTNKN NSVCSIGLYVKCGSRYEEINDQVNEQGMSVMLENMAFHSTAHLSHLRTIKSLEKIGANVS CNAFREHIVYTCECLKEYLPVVTNLLIGNVLFPRFLSWEMKNNVNRLNTMRTKLFENNEL YITELLHNTAWYNNTLGNKLYVCESSVENYTASNLRNFMLKHFSPKNMTLVGVNVDHEEL TKWTSRAFQDYVSVPYTSQKEVTPKYTGGFVSVEDKNVKKTNIAIAYETKGGWKTSDMIT LTVLQTLMGGGGSFSTGGPGKGMYSRLFLNVLNNYNFIESCMAFSTQHSDTGLFGLYFTG EPANTMDIINAMALEFQKMNKVTDEELNRAKKSLKSFMWMSLEYKSILMEDLARQMMILN RVLSGKQLCDAIDAVTKEDINRIVGHFLKTKPTVVVYGNINHSPHYDEICKILG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1008700484 SNRVLSGKQL0.992unspPcyM_1008700484 SNRVLSGKQL0.992unspPcyM_1008700484 SNRVLSGKQL0.992unspPcyM_1008700284 SLKHFSPKNM0.991unspPcyM_1008700318 SVPYTSQKEV0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India