PcyM_1015800 | ubiquitin carboxyl-terminal hydrolase 2, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_1015800OTHER0.9998280.0001110.000060
No Results

  • Fasta :-

    >PcyM_1015800 MDSPLTSNSPSKNLTLDKIQILNLFKLFDNLPFDPKSENETWHIVNKEFIDSLRNYEEGK ASRYHTLINNKIFVEDPSNVTTRTRLLKDYENGNGVNFLLYPEKAIEVLEKHFHINLKIP RAVYPYKIPKRERIIYKVDIQPLKVVVYSKNPNEFSSPSKMKIVVLRNDTVEDVLKEIVT DFDPASFKKNLFYAEEMSGKREYNWERLYLHDSTEYPLKKKMHEYDIDERTCLLITSERA DIKCLTNESDYGYTRRESSFRRSEKEEDCMRGYSSGRTGGYGSSSSTAHAQGYTQGYTQG CTQGYTQGQTQGHSHESMVKQISYIFQHGGDRGLINLGNTCFLNSSLQCLAKIKKFSNYF LSGTFWNHINYSNPVGQHGRLAKAYYETLIELWKIDKRSEPYAPKALKQAISEKRDEFYG YQQHDSQELLAFLLDGLHEDLNLIQKKPYYEEKLQGGLDKPDIDVAEASWNRHKEINNSI IVDLFQGQYRSRLQCPKCKKVSIAFDPFMYLSIPLPPKKNHRIWFHVILNRDAPIGMRFS CAFNGSQEVLKLKIFFLTIIKNLKVKRKNILLHNKCIIKNSKESSPHEGRNNHINTTTSS SSSSSCGGGGNSSSNNAFNFHSKYMDDKNEFYEDNEDNCTNADIANYVRAIKNKSKITST LKEQEICTVHESICAMCNIQSIDELEINNLSFLYTKFKNLACNQFFQVLNNSDFVTEPHT RNGKGISHIFVFILPKLCSHLIDKNLDVKVGDECLEVLTNSTVTTNNTSLKDEEVHNGII NNSGSNNGGSNNSGSNNSGSNNSGSSSNNNSSNNNGGSVEKKALKGKNNHSSKIVKKRKG VLDSSNSNGSPVRKGEKTHPSGAEEDEDDEVTPVTSAPAGANGNTRGNANSNAADPHDEA MEESNDINMQETSSETPLNDSNGMSKNRTNCEQHISYSELFRDRILFTQDTDNLHDKYFS LLIVPLCKDEQLFYKMKNNDLPLLFNVPFNFTVNDLYGKVENAYRKNTGGSRPPRGTTPT STSNVQSNQGDHTDRYEQLCIHNGNAKSGGDDESAKKDNISSSDVTNSKVITSEYDGGLE DKGGLNKVDGGEEYNSKFTLYLPCYNLKEEWTPKENLGLELKRDETYLADYIKNSEEKRL IIIHLDSVAIDYELSLDIKTITFVDLEERYGIDTCLKLFSEEEHLDENNTWYCGNCKLHV QAYKKLDLFRMPIILILHLKRFNNTNRWLRTKIDSYVYYPHKENEHLNMSPYILEDGLKH MTKMDPHYSPLYELIGVNCHTGGLCGGHYFAYVKLNGQWYNFNDTFVTTIDESQVNTKNA YLLFYQLHTHKNETFTGVAEQRNLAEEEAIRMANASYYN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1015800.fa Sequence name : PcyM_1015800 Sequence length : 1359 VALUES OF COMPUTED PARAMETERS Coef20 : 3.596 CoefTot : -0.311 ChDiff : -17 ZoneTo : 16 KR : 1 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.118 1.659 0.098 0.597 MesoH : -0.536 0.284 -0.436 0.181 MuHd_075 : 40.513 21.393 11.238 6.936 MuHd_095 : 13.220 5.429 2.730 1.447 MuHd_100 : 9.137 5.125 1.115 0.939 MuHd_105 : 6.192 1.091 2.402 0.766 Hmax_075 : 13.067 7.583 0.892 3.337 Hmax_095 : -1.750 -0.200 -2.929 0.630 Hmax_100 : -2.800 0.600 -3.264 0.630 Hmax_105 : -4.550 -1.517 -2.939 0.093 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9835 0.0165 DFMC : 0.9676 0.0324
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1359 PcyM_1015800 MDSPLTSNSPSKNLTLDKIQILNLFKLFDNLPFDPKSENETWHIVNKEFIDSLRNYEEGKASRYHTLINNKIFVEDPSNV 80 TTRTRLLKDYENGNGVNFLLYPEKAIEVLEKHFHINLKIPRAVYPYKIPKRERIIYKVDIQPLKVVVYSKNPNEFSSPSK 160 MKIVVLRNDTVEDVLKEIVTDFDPASFKKNLFYAEEMSGKREYNWERLYLHDSTEYPLKKKMHEYDIDERTCLLITSERA 240 DIKCLTNESDYGYTRRESSFRRSEKEEDCMRGYSSGRTGGYGSSSSTAHAQGYTQGYTQGCTQGYTQGQTQGHSHESMVK 320 QISYIFQHGGDRGLINLGNTCFLNSSLQCLAKIKKFSNYFLSGTFWNHINYSNPVGQHGRLAKAYYETLIELWKIDKRSE 400 PYAPKALKQAISEKRDEFYGYQQHDSQELLAFLLDGLHEDLNLIQKKPYYEEKLQGGLDKPDIDVAEASWNRHKEINNSI 480 IVDLFQGQYRSRLQCPKCKKVSIAFDPFMYLSIPLPPKKNHRIWFHVILNRDAPIGMRFSCAFNGSQEVLKLKIFFLTII 560 KNLKVKRKNILLHNKCIIKNSKESSPHEGRNNHINTTTSSSSSSSCGGGGNSSSNNAFNFHSKYMDDKNEFYEDNEDNCT 640 NADIANYVRAIKNKSKITSTLKEQEICTVHESICAMCNIQSIDELEINNLSFLYTKFKNLACNQFFQVLNNSDFVTEPHT 720 RNGKGISHIFVFILPKLCSHLIDKNLDVKVGDECLEVLTNSTVTTNNTSLKDEEVHNGIINNSGSNNGGSNNSGSNNSGS 800 NNSGSSSNNNSSNNNGGSVEKKALKGKNNHSSKIVKKRKGVLDSSNSNGSPVRKGEKTHPSGAEEDEDDEVTPVTSAPAG 880 ANGNTRGNANSNAADPHDEAMEESNDINMQETSSETPLNDSNGMSKNRTNCEQHISYSELFRDRILFTQDTDNLHDKYFS 960 LLIVPLCKDEQLFYKMKNNDLPLLFNVPFNFTVNDLYGKVENAYRKNTGGSRPPRGTTPTSTSNVQSNQGDHTDRYEQLC 1040 IHNGNAKSGGDDESAKKDNISSSDVTNSKVITSEYDGGLEDKGGLNKVDGGEEYNSKFTLYLPCYNLKEEWTPKENLGLE 1120 LKRDETYLADYIKNSEEKRLIIIHLDSVAIDYELSLDIKTITFVDLEERYGIDTCLKLFSEEEHLDENNTWYCGNCKLHV 1200 QAYKKLDLFRMPIILILHLKRFNNTNRWLRTKIDSYVYYPHKENEHLNMSPYILEDGLKHMTKMDPHYSPLYELIGVNCH 1280 TGGLCGGHYFAYVKLNGQWYNFNDTFVTTIDESQVNTKNAYLLFYQLHTHKNETFTGVAEQRNLAEEEAIRMANASYYN 1360 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ................................................................................ 1120 ................................................................................ 1200 ................................................................................ 1280 ............................................................................... 1360 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >PcyM_1015800 ATGGATTCCCCACTCACGTCCAATTCGCCCAGCAAAAACTTAACCCTTGATAAGATCCAA ATTTTGAATTTGTTTAAGCTGTTTGATAACCTGCCCTTCGACCCAAAGAGCGAAAATGAG ACATGGCACATCGTGAACAAAGAATTCATAGACAGCCTGAGGAACTACGAAGAAGGGAAG GCCAGTCGGTACCACACTCTGATCAACAACAAAATATTTGTAGAGGATCCAAGTAACGTC ACCACGAGGACGAGGCTCCTCAAGGATTACGAAAATGGAAATGGAGTCAACTTCCTCCTC TACCCAGAGAAGGCCATAGAGGTGTTGGAAAAGCATTTTCATATTAACCTAAAAATTCCC AGGGCAGTTTACCCCTATAAGATTCCCAAGAGGGAGAGGATAATATACAAAGTAGACATC CAGCCTCTCAAAGTTGTGGTGTACTCGAAGAACCCGAACGAGTTTAGCAGCCCCTCCAAG ATGAAGATCGTCGTCCTGCGCAACGACACGGTGGAGGACGTGCTCAAGGAGATCGTGACC GACTTCGACCCCGCAAGCTTCAAGAAGAACCTATTCTACGCAGAAGAGATGAGCGGCAAA AGGGAATACAATTGGGAGCGGCTGTACCTGCACGATTCGACGGAGTACCCCCTGAAGAAA AAGATGCACGAATATGACATTGATGAGAGGACCTGTTTGTTAATAACAAGTGAGAGAGCG GATATAAAGTGCCTGACGAATGAGAGTGACTATGGGTATACGAGGCGGGAATCGAGTTTT AGGAGGTCCGAGAAGGAGGAGGATTGTATGAGGGGGTACTCCAGCGGACGCACAGGAGGG TACGGTAGCAGTAGTAGTACTGCCCACGCACAGGGGTACACACAGGGATACACACAGGGA TGTACACAGGGATATACACAAGGACAAACACAGGGACACTCCCACGAAAGCATGGTCAAG CAAATAAGCTACATATTCCAGCACGGGGGGGACCGAGGCCTGATCAACCTGGGGAACACC TGCTTCTTGAACTCCTCCCTGCAGTGTCTAGCCAAGATAAAAAAATTTTCCAACTATTTC TTAAGTGGAACTTTTTGGAATCACATAAATTACTCAAATCCAGTGGGTCAACATGGACGG TTAGCCAAAGCCTACTACGAAACCCTGATTGAGCTTTGGAAAATAGATAAGAGAAGTGAA CCCTATGCACCCAAGGCATTAAAACAAGCTATAAGTGAAAAAAGAGATGAATTCTACGGA TACCAACAACACGATTCACAAGAATTGTTAGCCTTCCTTCTAGATGGGCTACATGAAGAT CTGAATTTAATACAAAAAAAGCCATACTATGAAGAGAAACTACAAGGAGGGTTAGACAAA CCAGATATTGATGTTGCAGAAGCTTCCTGGAATAGACACAAAGAAATAAATAATTCTATT ATTGTGGATCTATTTCAGGGACAATACAGATCTCGTTTACAATGTCCTAAGTGTAAAAAA GTTAGCATAGCATTTGATCCTTTTATGTATCTATCGATCCCATTGCCACCTAAAAAGAAT CACCGAATTTGGTTTCATGTTATCCTAAATAGAGATGCCCCCATAGGCATGAGATTCTCC TGCGCCTTTAATGGATCACAAGAGGTCCTAAAATTGAAAATCTTCTTTCTCACCATAATA AAAAATTTAAAAGTGAAAAGAAAAAATATTCTACTACATAATAAATGTATAATTAAAAAT AGCAAAGAGTCCTCTCCTCATGAAGGAAGAAATAATCATATCAATACAACTACATCCAGT AGTAGTAGTAGCAGTTGTGGTGGTGGAGGAAACAGCAGTAGTAATAATGCCTTTAATTTC CATTCTAAATATATGGATGATAAAAATGAATTTTATGAAGATAATGAGGACAACTGCACC AATGCAGATATTGCAAATTACGTGAGGGCCATAAAAAATAAAAGTAAAATAACCAGCACA TTGAAGGAACAAGAAATCTGCACCGTCCATGAGAGCATCTGTGCCATGTGTAATATACAA TCGATAGACGAACTAGAGATTAACAACTTGAGCTTCCTCTATACCAAGTTTAAAAATCTT GCTTGTAATCAATTTTTTCAAGTTTTAAATAACTCTGATTTTGTCACCGAACCGCACACA AGAAATGGAAAAGGAATCAGCCACATTTTTGTTTTCATCCTCCCCAAGTTATGTTCCCAC CTTATAGATAAAAATTTGGACGTCAAAGTTGGGGATGAATGCTTGGAGGTGCTTACCAAC TCGACGGTCACCACCAACAACACCAGCCTCAAGGATGAAGAGGTGCACAACGGCATTATC AATAATAGCGGCAGCAATAATGGCGGTAGTAATAATAGCGGTAGCAACAATAGCGGTAGC AATAATAGCGGTAGCAGCAGCAACAACAACAGCAGTAACAACAATGGCGGTAGCGTGGAG AAGAAAGCGCTCAAGGGGAAGAACAACCACTCCAGCAAAATCGTTAAGAAGAGGAAGGGT GTGCTGGACTCCTCCAACAGCAACGGTAGCCCTGTTCGCAAGGGAGAAAAAACGCACCCC TCCGGGGCCGAGGAAGATGAAGACGATGAGGTCACTCCCGTGACATCAGCCCCAGCGGGA GCGAATGGAAACACTCGCGGAAATGCTAACAGCAACGCAGCAGACCCCCACGACGAAGCT ATGGAAGAGTCAAACGATATTAACATGCAGGAGACCTCCTCAGAAACTCCCCTAAATGAT TCCAATGGAATGAGCAAGAACAGAACCAACTGCGAGCAACACATTTCTTACAGTGAACTT TTTAGAGATCGAATTCTGTTCACACAAGATACAGATAATCTGCATGACAAGTACTTCTCC CTCCTCATAGTACCTCTGTGCAAAGATGAGCAACTTTTCTACAAAATGAAAAATAATGAT TTACCTCTCCTGTTTAATGTCCCCTTCAATTTTACTGTCAATGACCTGTACGGCAAGGTG GAAAATGCCTACCGGAAGAACACCGGGGGGAGTAGACCACCCAGGGGAACCACCCCTACC TCTACTTCCAATGTGCAGAGCAACCAAGGTGATCACACTGATCGGTATGAACAACTGTGC ATACATAACGGGAATGCAAAAAGTGGTGGAGATGATGAAAGTGCGAAGAAGGATAACATA TCTAGTAGCGATGTGACGAATAGTAAGGTTATCACAAGTGAGTACGACGGGGGGTTGGAG GATAAGGGAGGTCTAAACAAGGTTGACGGAGGGGAGGAGTACAACAGCAAGTTCACTCTC TACCTGCCGTGCTATAACCTGAAGGAGGAGTGGACTCCCAAGGAGAACCTAGGACTCGAA CTCAAAAGAGACGAAACCTACCTTGCAGATTACATAAAAAATTCAGAAGAAAAGCGACTC ATAATTATACACCTTGACAGCGTTGCCATAGATTATGAGTTGTCCCTTGACATAAAAACG ATAACATTTGTGGACTTAGAGGAACGCTATGGAATTGACACATGTTTGAAATTATTTTCC GAGGAGGAGCACCTGGACGAGAACAACACGTGGTACTGTGGAAATTGCAAGCTGCACGTA CAAGCTTACAAAAAGTTGGACCTATTCCGAATGCCAATTATTCTCATTCTTCACTTAAAA AGATTCAACAACACGAATAGGTGGCTAAGGACAAAAATCGATTCGTATGTTTACTACCCC CATAAAGAAAATGAGCATTTGAATATGTCACCATACATCCTGGAGGATGGTTTAAAGCAC ATGACAAAGATGGACCCTCATTACTCTCCTTTGTATGAGTTAATTGGAGTGAACTGTCAC ACGGGTGGCCTCTGTGGGGGGCACTACTTTGCGTATGTGAAGCTCAACGGTCAGTGGTAT AACTTCAACGATACCTTTGTGACCACCATTGACGAGTCGCAGGTCAACACCAAGAATGCG TACTTGCTGTTTTACCAGCTGCATACGCACAAGAACGAGACGTTCACGGGCGTGGCGGAG CAGAGGAACTTGGCAGAGGAGGAGGCCATTCGCATGGCCAACGCGAGCTACTACAACTAG
  • Download Fasta

  • Fasta :-

    MDSPLTSNSPSKNLTLDKIQILNLFKLFDNLPFDPKSENETWHIVNKEFIDSLRNYEEGK ASRYHTLINNKIFVEDPSNVTTRTRLLKDYENGNGVNFLLYPEKAIEVLEKHFHINLKIP RAVYPYKIPKRERIIYKVDIQPLKVVVYSKNPNEFSSPSKMKIVVLRNDTVEDVLKEIVT DFDPASFKKNLFYAEEMSGKREYNWERLYLHDSTEYPLKKKMHEYDIDERTCLLITSERA DIKCLTNESDYGYTRRESSFRRSEKEEDCMRGYSSGRTGGYGSSSSTAHAQGYTQGYTQG CTQGYTQGQTQGHSHESMVKQISYIFQHGGDRGLINLGNTCFLNSSLQCLAKIKKFSNYF LSGTFWNHINYSNPVGQHGRLAKAYYETLIELWKIDKRSEPYAPKALKQAISEKRDEFYG YQQHDSQELLAFLLDGLHEDLNLIQKKPYYEEKLQGGLDKPDIDVAEASWNRHKEINNSI IVDLFQGQYRSRLQCPKCKKVSIAFDPFMYLSIPLPPKKNHRIWFHVILNRDAPIGMRFS CAFNGSQEVLKLKIFFLTIIKNLKVKRKNILLHNKCIIKNSKESSPHEGRNNHINTTTSS SSSSSCGGGGNSSSNNAFNFHSKYMDDKNEFYEDNEDNCTNADIANYVRAIKNKSKITST LKEQEICTVHESICAMCNIQSIDELEINNLSFLYTKFKNLACNQFFQVLNNSDFVTEPHT RNGKGISHIFVFILPKLCSHLIDKNLDVKVGDECLEVLTNSTVTTNNTSLKDEEVHNGII NNSGSNNGGSNNSGSNNSGSNNSGSSSNNNSSNNNGGSVEKKALKGKNNHSSKIVKKRKG VLDSSNSNGSPVRKGEKTHPSGAEEDEDDEVTPVTSAPAGANGNTRGNANSNAADPHDEA MEESNDINMQETSSETPLNDSNGMSKNRTNCEQHISYSELFRDRILFTQDTDNLHDKYFS LLIVPLCKDEQLFYKMKNNDLPLLFNVPFNFTVNDLYGKVENAYRKNTGGSRPPRGTTPT STSNVQSNQGDHTDRYEQLCIHNGNAKSGGDDESAKKDNISSSDVTNSKVITSEYDGGLE DKGGLNKVDGGEEYNSKFTLYLPCYNLKEEWTPKENLGLELKRDETYLADYIKNSEEKRL IIIHLDSVAIDYELSLDIKTITFVDLEERYGIDTCLKLFSEEEHLDENNTWYCGNCKLHV QAYKKLDLFRMPIILILHLKRFNNTNRWLRTKIDSYVYYPHKENEHLNMSPYILEDGLKH MTKMDPHYSPLYELIGVNCHTGGLCGGHYFAYVKLNGQWYNFNDTFVTTIDESQVNTKNA YLLFYQLHTHKNETFTGVAEQRNLAEEEAIRMANASYYN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1015800263 SSFRRSEKEE0.998unspPcyM_1015800263 SSFRRSEKEE0.998unspPcyM_1015800263 SSFRRSEKEE0.998unspPcyM_1015800412 SKQAISEKRD0.994unspPcyM_1015800585 SSKESSPHEG0.997unspPcyM_1015800603 SSSSSSSSCG0.992unspPcyM_1015800769 STNNTSLKDE0.998unspPcyM_10158001073 SKVITSEYDG0.995unspPcyM_1015800258 STRRESSFRR0.994unspPcyM_1015800259 SRRESSFRRS0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India