PcyM_1026500 | subtilisin-like protease 1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1026500SP0.1770360.8166520.006313CS pos: 25-26. TLG-SD. Pr: 0.9635
No Results

  • Fasta :-

    >PcyM_1026500 MGLTRRIALLLCPWVVQLLIQRTLGSDILANEGKKEKDDVHKIISELRFLQKVETILESS NMSVSDVEADVNAYNPDRDAPREELEKLQDQQEEPEKEINHLRKNPQRRTEKKEASIKNK KALRLIVSENHATSPSFFEESLLQEDVMSFIQSKGKLANLKNLKSIIIDLNDDMTDEELA EYISMLERKGALIESDKLVGADDISLASIKDAVRRGESRLNLDKFHSTMLEVQDGEAKTS HPGSAIGGSDVSDVNGGSDVRGGDSSSDDDILLEGSIHTESYLPGRKTSNSYKFNDEYRN LQWGLDLARLDETQDLINTNRVSVTKICVIDSGIDYNHPDLKGNIDVNMKELYGRRGVDD DNNGVVDDVYGANFVNNSGDPMDDNYHGTHVSGIISAVGNNNIGIVGVDGHSKLIICKAL DQHKLGRLGDMFKCIDYCISRKAHMINGSFSFDEYSSIFNASVNHLRSLGILFFVSASNC AHDKLTEPDITKCDLAVNYRYPPILSKTHNNVIAVANLKRDLDDSYSLSVNSFYSNIYCQ LAAPGTNIYSTTPFNSYRKLNGTSMASPHVAAIASIIRSINPNLSYVQIVEIMKNAIVKL PSLTEKVSWGGYVDILLAVNLAIDSKSVPYIKSQSWFRWKQRAR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1026500.fa Sequence name : PcyM_1026500 Sequence length : 644 VALUES OF COMPUTED PARAMETERS Coef20 : 4.801 CoefTot : 0.449 ChDiff : -17 ZoneTo : 26 KR : 3 DE : 0 CleavSite : 32 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.041 1.529 0.068 0.636 MesoH : -0.116 0.579 -0.279 0.288 MuHd_075 : 29.929 25.462 6.634 9.324 MuHd_095 : 32.658 25.188 10.415 7.941 MuHd_100 : 25.200 17.632 7.346 5.987 MuHd_105 : 19.097 9.036 4.302 4.216 Hmax_075 : 17.900 23.900 4.442 7.380 Hmax_095 : 18.800 23.450 4.943 7.709 Hmax_100 : 17.500 21.200 4.928 6.560 Hmax_105 : 16.975 16.100 4.210 5.880 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0462 0.9538 DFMC : 0.1719 0.8281 This protein is probably imported in mitochondria. f(Ser) = 0.0385 f(Arg) = 0.1154 CMi = 0.16611 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 644 PcyM_1026500 MGLTRRIALLLCPWVVQLLIQRTLGSDILANEGKKEKDDVHKIISELRFLQKVETILESSNMSVSDVEADVNAYNPDRDA 80 PREELEKLQDQQEEPEKEINHLRKNPQRRTEKKEASIKNKKALRLIVSENHATSPSFFEESLLQEDVMSFIQSKGKLANL 160 KNLKSIIIDLNDDMTDEELAEYISMLERKGALIESDKLVGADDISLASIKDAVRRGESRLNLDKFHSTMLEVQDGEAKTS 240 HPGSAIGGSDVSDVNGGSDVRGGDSSSDDDILLEGSIHTESYLPGRKTSNSYKFNDEYRNLQWGLDLARLDETQDLINTN 320 RVSVTKICVIDSGIDYNHPDLKGNIDVNMKELYGRRGVDDDNNGVVDDVYGANFVNNSGDPMDDNYHGTHVSGIISAVGN 400 NNIGIVGVDGHSKLIICKALDQHKLGRLGDMFKCIDYCISRKAHMINGSFSFDEYSSIFNASVNHLRSLGILFFVSASNC 480 AHDKLTEPDITKCDLAVNYRYPPILSKTHNNVIAVANLKRDLDDSYSLSVNSFYSNIYCQLAAPGTNIYSTTPFNSYRKL 560 NGTSMASPHVAAIASIIRSINPNLSYVQIVEIMKNAIVKLPSLTEKVSWGGYVDILLAVNLAIDSKSVPYIKSQSWFRWK 640 QRAR 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1026500 5 --MGLTR|RI 0.072 . PcyM_1026500 6 -MGLTRR|IA 0.108 . PcyM_1026500 22 VQLLIQR|TL 0.072 . PcyM_1026500 34 ILANEGK|KE 0.064 . PcyM_1026500 35 LANEGKK|EK 0.110 . PcyM_1026500 37 NEGKKEK|DD 0.072 . PcyM_1026500 42 EKDDVHK|II 0.073 . PcyM_1026500 48 KIISELR|FL 0.121 . PcyM_1026500 52 ELRFLQK|VE 0.063 . PcyM_1026500 78 NAYNPDR|DA 0.121 . PcyM_1026500 82 PDRDAPR|EE 0.089 . PcyM_1026500 87 PREELEK|LQ 0.068 . PcyM_1026500 97 QQEEPEK|EI 0.065 . PcyM_1026500 103 KEINHLR|KN 0.089 . PcyM_1026500 104 EINHLRK|NP 0.080 . PcyM_1026500 108 LRKNPQR|RT 0.179 . PcyM_1026500 109 RKNPQRR|TE 0.190 . PcyM_1026500 112 PQRRTEK|KE 0.096 . PcyM_1026500 113 QRRTEKK|EA 0.193 . PcyM_1026500 118 KKEASIK|NK 0.061 . PcyM_1026500 120 EASIKNK|KA 0.083 . PcyM_1026500 121 ASIKNKK|AL 0.093 . PcyM_1026500 124 KNKKALR|LI 0.086 . PcyM_1026500 154 MSFIQSK|GK 0.072 . PcyM_1026500 156 FIQSKGK|LA 0.064 . PcyM_1026500 161 GKLANLK|NL 0.064 . PcyM_1026500 164 ANLKNLK|SI 0.078 . PcyM_1026500 188 YISMLER|KG 0.083 . PcyM_1026500 189 ISMLERK|GA 0.103 . PcyM_1026500 197 ALIESDK|LV 0.077 . PcyM_1026500 210 ISLASIK|DA 0.072 . PcyM_1026500 214 SIKDAVR|RG 0.070 . PcyM_1026500 215 IKDAVRR|GE 0.146 . PcyM_1026500 219 VRRGESR|LN 0.108 . PcyM_1026500 224 SRLNLDK|FH 0.075 . PcyM_1026500 238 VQDGEAK|TS 0.064 . PcyM_1026500 261 NGGSDVR|GG 0.075 . PcyM_1026500 286 ESYLPGR|KT 0.097 . PcyM_1026500 287 SYLPGRK|TS 0.059 . PcyM_1026500 293 KTSNSYK|FN 0.098 . PcyM_1026500 299 KFNDEYR|NL 0.117 . PcyM_1026500 309 WGLDLAR|LD 0.077 . PcyM_1026500 321 DLINTNR|VS 0.079 . PcyM_1026500 326 NRVSVTK|IC 0.061 . PcyM_1026500 342 YNHPDLK|GN 0.075 . PcyM_1026500 350 NIDVNMK|EL 0.058 . PcyM_1026500 355 MKELYGR|RG 0.077 . PcyM_1026500 356 KELYGRR|GV 0.197 . PcyM_1026500 413 GVDGHSK|LI 0.061 . PcyM_1026500 418 SKLIICK|AL 0.071 . PcyM_1026500 424 KALDQHK|LG 0.057 . PcyM_1026500 427 DQHKLGR|LG 0.082 . PcyM_1026500 433 RLGDMFK|CI 0.072 . PcyM_1026500 441 IDYCISR|KA 0.104 . PcyM_1026500 442 DYCISRK|AH 0.077 . PcyM_1026500 467 ASVNHLR|SL 0.176 . PcyM_1026500 484 SNCAHDK|LT 0.074 . PcyM_1026500 492 TEPDITK|CD 0.057 . PcyM_1026500 500 DLAVNYR|YP 0.081 . PcyM_1026500 507 YPPILSK|TH 0.058 . PcyM_1026500 519 IAVANLK|RD 0.052 . PcyM_1026500 520 AVANLKR|DL 0.332 . PcyM_1026500 558 TPFNSYR|KL 0.105 . PcyM_1026500 559 PFNSYRK|LN 0.091 . PcyM_1026500 578 AIASIIR|SI 0.140 . PcyM_1026500 594 QIVEIMK|NA 0.069 . PcyM_1026500 599 MKNAIVK|LP 0.071 . PcyM_1026500 606 LPSLTEK|VS 0.077 . PcyM_1026500 626 NLAIDSK|SV 0.097 . PcyM_1026500 632 KSVPYIK|SQ 0.080 . PcyM_1026500 638 KSQSWFR|WK 0.097 . PcyM_1026500 640 QSWFRWK|QR 0.064 . PcyM_1026500 642 WFRWKQR|AR 0.106 . PcyM_1026500 644 RWKQRAR|-- 0.115 . ____________________________^_________________

  • Fasta :-

    >PcyM_1026500 ATGGGTCTGACGCGAAGAATAGCATTGCTCCTCTGCCCATGGGTAGTCCAACTGCTAATC CAGCGAACCCTCGGAAGTGACATTTTGGCAAATGAAGGGAAGAAGGAGAAGGATGATGTG CATAAAATTATAAGTGAGTTACGGTTCCTACAGAAAGTAGAAACCATTTTGGAGAGTAGC AATATGAGCGTTTCGGATGTAGAGGCAGATGTGAATGCATACAATCCGGATAGGGATGCT CCCAGGGAAGAACTGGAAAAATTGCAAGACCAGCAGGAAGAACCTGAAAAAGAAATTAAT CACTTACGTAAGAACCCACAAAGAAGAACAGAAAAAAAAGAAGCATCTATAAAAAACAAA AAAGCATTACGATTAATCGTGAGTGAGAATCATGCCACGAGTCCATCCTTCTTCGAAGAG TCTCTACTTCAGGAAGATGTGATGAGTTTTATCCAGAGTAAAGGGAAGCTAGCCAATTTA AAAAACTTGAAATCTATTATTATTGATTTGAATGACGACATGACGGATGAGGAGTTGGCA GAATATATTAGCATGTTGGAGAGGAAGGGGGCCCTCATAGAATCGGACAAGTTGGTAGGA GCGGATGACATCAGCCTTGCATCTATAAAAGATGCAGTTAGGCGTGGAGAGAGTCGCTTA AATTTGGACAAATTTCACAGCACCATGTTGGAGGTGCAGGACGGGGAGGCGAAGACCAGC CATCCGGGCAGTGCCATCGGTGGGAGCGATGTAAGCGATGTAAACGGTGGAAGCGATGTA CGCGGTGGCGACAGCAGCAGCGATGATGACATCCTATTAGAGGGGTCCATACACACGGAG TCCTACCTCCCAGGGAGAAAAACAAGCAATAGTTACAAATTTAACGACGAATATAGAAAC CTGCAGTGGGGACTAGACCTTGCCAGGTTAGACGAAACACAGGATCTAATAAACACGAAC CGAGTGAGTGTAACAAAAATTTGTGTAATTGATAGCGGAATCGATTACAATCACCCTGAC TTAAAAGGAAACATAGATGTGAATATGAAAGAGCTATATGGACGAAGGGGAGTGGATGAT GATAACAATGGAGTCGTTGACGACGTGTATGGAGCGAACTTTGTGAATAACAGTGGTGAT CCCATGGATGACAATTATCATGGAACCCATGTATCCGGAATCATTTCCGCTGTTGGGAAT AACAACATCGGCATAGTAGGAGTGGATGGACACTCCAAGCTAATCATATGTAAGGCTCTG GATCAGCACAAGTTGGGACGATTAGGGGACATGTTCAAATGTATTGATTATTGTATTAGT AGAAAGGCACATATGATTAATGGTAGTTTTTCTTTTGATGAATATAGCAGTATCTTTAAC GCATCTGTGAATCACTTACGATCCTTGGGAATTCTTTTCTTCGTCTCAGCAAGCAATTGT GCACATGATAAGCTGACCGAACCAGATATCACCAAATGTGATCTTGCCGTTAATTATAGG TACCCCCCTATATTGTCCAAGACACACAATAACGTAATTGCTGTTGCCAATTTGAAGAGA GACCTAGATGACAGTTACTCCTTATCTGTGAACTCTTTTTATAGTAACATCTATTGCCAG CTAGCTGCTCCTGGCACAAACATATACTCTACAACACCCTTCAACAGCTATCGAAAATTG AATGGTACTTCCATGGCATCTCCTCACGTGGCTGCAATCGCTTCTATCATTAGATCTATT AACCCTAATTTGAGTTATGTACAAATTGTGGAGATAATGAAGAACGCCATTGTGAAGCTG CCTTCTCTCACGGAGAAGGTCTCCTGGGGGGGCTACGTGGATATCCTGCTCGCCGTCAAC CTAGCCATCGACTCCAAGTCGGTGCCCTACATCAAGTCGCAGTCCTGGTTCAGGTGGAAG CAGCGCGCCCGATGA
  • Download Fasta

  • Fasta :-

    MGLTRRIALLLCPWVVQLLIQRTLGSDILANEGKKEKDDVHKIISELRFLQKVETILESS NMSVSDVEADVNAYNPDRDAPREELEKLQDQQEEPEKEINHLRKNPQRRTEKKEASIKNK KALRLIVSENHATSPSFFEESLLQEDVMSFIQSKGKLANLKNLKSIIIDLNDDMTDEELA EYISMLERKGALIESDKLVGADDISLASIKDAVRRGESRLNLDKFHSTMLEVQDGEAKTS HPGSAIGGSDVSDVNGGSDVRGGDSSSDDDILLEGSIHTESYLPGRKTSNSYKFNDEYRN LQWGLDLARLDETQDLINTNRVSVTKICVIDSGIDYNHPDLKGNIDVNMKELYGRRGVDD DNNGVVDDVYGANFVNNSGDPMDDNYHGTHVSGIISAVGNNNIGIVGVDGHSKLIICKAL DQHKLGRLGDMFKCIDYCISRKAHMINGSFSFDEYSSIFNASVNHLRSLGILFFVSASNC AHDKLTEPDITKCDLAVNYRYPPILSKTHNNVIAVANLKRDLDDSYSLSVNSFYSNIYCQ LAAPGTNIYSTTPFNSYRKLNGTSMASPHVAAIASIIRSINPNLSYVQIVEIMKNAIVKL PSLTEKVSWGGYVDILLAVNLAIDSKSVPYIKSQSWFRWKQRAR

  • title: active site
  • coordinates: H387,F450,S564
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1026500116 SKKEASIKNK0.993unspPcyM_1026500116 SKKEASIKNK0.993unspPcyM_1026500116 SKKEASIKNK0.993unspPcyM_1026500134 SNHATSPSFF0.992unspPcyM_1026500208 SISLASIKDA0.997unspPcyM_1026500265 SRGGDSSSDD0.995unspPcyM_1026500266 SGGDSSSDDD0.992unspPcyM_1026500291 SKTSNSYKFN0.997unspPcyM_102650063 SSSNMSVSDV0.996unspPcyM_102650065 SNMSVSDVEA0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India