PcyM_1026800 | subtilisin-like protease 3, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1026800OTHER0.7653460.2275870.007068
No Results

  • Fasta :-

    >PcyM_1026800 MTIRKYHYAFVCLLISGMVNHMPVQYRRHPMRDVTARRKHRTVRDDCGEGRASFLICFQG RVLRGASAEVLKVGGFQTGVGSSSLSSSPASSPSSPPPSSPPPSSPPSSPPSSPPSPSAH SPPRGDHLLQEDPHHMDETLTKLRKKKMIIKFKQQENASQSALIQQNIVNLLGSCGRVKK LSHIDLYLYETFSNISERALKNCLQLLSSGPVLVEQDFQIHAVERGGCMSGMVDKGGIVD VGDMADKGGIVDVGGLYAIRAIGGEAPARSGTNLRSHAGSNGTFQLNNQMAFKNFLSRLQ SNYKGTNIINGYDQTKMKEGTEMSEPHEQNDVNVCIVDTGVDYNHRDLRGNVVHVLHGRD VRGDGSGRGGSGRGGSGRGGSGKDGSGRDGSGTDGRSWDDGDRGDRPGGMDNHGHGTFIA GIIAGNSQRESQGINGICKRAKLTICKALNSRNAGVVSDILKCFNFCASKEAKIINASFA STKNYVSLFEALKTLEEKNILVVSSSGNCCPTTESMNTFPECNLDVKKVYPTAYSLNLRN LITVSNMIQQENGQVILSPDSCYSANYVHLAAPGDDIISTFPRNKYAISSGSSFSAAVVT GLAALVLSINARLSYEEVIDLLRGSIVQTESLRSKVKWGGFLDVRHLVSSTIALSRGEAE AARE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1026800.fa Sequence name : PcyM_1026800 Sequence length : 664 VALUES OF COMPUTED PARAMETERS Coef20 : 4.293 CoefTot : -1.309 ChDiff : 12 ZoneTo : 32 KR : 5 DE : 0 CleavSite : 34 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.965 2.059 0.366 0.681 MesoH : 0.073 0.553 -0.209 0.251 MuHd_075 : 16.893 17.936 4.952 4.682 MuHd_095 : 33.368 17.923 8.551 7.603 MuHd_100 : 25.860 15.049 7.265 6.083 MuHd_105 : 20.547 12.959 6.429 3.643 Hmax_075 : 4.500 19.700 2.888 1.832 Hmax_095 : 11.400 8.000 0.676 4.280 Hmax_100 : 8.600 17.900 4.105 3.760 Hmax_105 : 13.000 17.900 4.105 4.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4891 0.5109 DFMC : 0.4800 0.5200 This protein is probably imported in mitochondria. f(Ser) = 0.0313 f(Arg) = 0.1250 CMi = 0.12755 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 664 PcyM_1026800 MTIRKYHYAFVCLLISGMVNHMPVQYRRHPMRDVTARRKHRTVRDDCGEGRASFLICFQGRVLRGASAEVLKVGGFQTGV 80 GSSSLSSSPASSPSSPPPSSPPPSSPPSSPPSSPPSPSAHSPPRGDHLLQEDPHHMDETLTKLRKKKMIIKFKQQENASQ 160 SALIQQNIVNLLGSCGRVKKLSHIDLYLYETFSNISERALKNCLQLLSSGPVLVEQDFQIHAVERGGCMSGMVDKGGIVD 240 VGDMADKGGIVDVGGLYAIRAIGGEAPARSGTNLRSHAGSNGTFQLNNQMAFKNFLSRLQSNYKGTNIINGYDQTKMKEG 320 TEMSEPHEQNDVNVCIVDTGVDYNHRDLRGNVVHVLHGRDVRGDGSGRGGSGRGGSGRGGSGKDGSGRDGSGTDGRSWDD 400 GDRGDRPGGMDNHGHGTFIAGIIAGNSQRESQGINGICKRAKLTICKALNSRNAGVVSDILKCFNFCASKEAKIINASFA 480 STKNYVSLFEALKTLEEKNILVVSSSGNCCPTTESMNTFPECNLDVKKVYPTAYSLNLRNLITVSNMIQQENGQVILSPD 560 SCYSANYVHLAAPGDDIISTFPRNKYAISSGSSFSAAVVTGLAALVLSINARLSYEEVIDLLRGSIVQTESLRSKVKWGG 640 FLDVRHLVSSTIALSRGEAEAARE 720 ...........................................P.................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_1026800 4 ---MTIR|KY 0.094 . PcyM_1026800 5 --MTIRK|YH 0.080 . PcyM_1026800 27 HMPVQYR|RH 0.075 . PcyM_1026800 28 MPVQYRR|HP 0.127 . PcyM_1026800 32 YRRHPMR|DV 0.325 . PcyM_1026800 37 MRDVTAR|RK 0.118 . PcyM_1026800 38 RDVTARR|KH 0.139 . PcyM_1026800 39 DVTARRK|HR 0.066 . PcyM_1026800 41 TARRKHR|TV 0.478 . PcyM_1026800 44 RKHRTVR|DD 0.579 *ProP* PcyM_1026800 51 DDCGEGR|AS 0.087 . PcyM_1026800 61 LICFQGR|VL 0.093 . PcyM_1026800 64 FQGRVLR|GA 0.407 . PcyM_1026800 72 ASAEVLK|VG 0.067 . PcyM_1026800 124 SAHSPPR|GD 0.122 . PcyM_1026800 142 MDETLTK|LR 0.062 . PcyM_1026800 144 ETLTKLR|KK 0.075 . PcyM_1026800 145 TLTKLRK|KK 0.076 . PcyM_1026800 146 LTKLRKK|KM 0.105 . PcyM_1026800 147 TKLRKKK|MI 0.479 . PcyM_1026800 151 KKKMIIK|FK 0.076 . PcyM_1026800 153 KMIIKFK|QQ 0.072 . PcyM_1026800 177 LLGSCGR|VK 0.069 . PcyM_1026800 179 GSCGRVK|KL 0.071 . PcyM_1026800 180 SCGRVKK|LS 0.300 . PcyM_1026800 198 FSNISER|AL 0.120 . PcyM_1026800 201 ISERALK|NC 0.118 . PcyM_1026800 225 QIHAVER|GG 0.111 . PcyM_1026800 235 MSGMVDK|GG 0.070 . PcyM_1026800 247 VGDMADK|GG 0.059 . PcyM_1026800 260 GGLYAIR|AI 0.102 . PcyM_1026800 269 GGEAPAR|SG 0.121 . PcyM_1026800 275 RSGTNLR|SH 0.147 . PcyM_1026800 293 NNQMAFK|NF 0.061 . PcyM_1026800 298 FKNFLSR|LQ 0.102 . PcyM_1026800 304 RLQSNYK|GT 0.070 . PcyM_1026800 316 NGYDQTK|MK 0.077 . PcyM_1026800 318 YDQTKMK|EG 0.063 . PcyM_1026800 346 GVDYNHR|DL 0.101 . PcyM_1026800 349 YNHRDLR|GN 0.247 . PcyM_1026800 359 VHVLHGR|DV 0.148 . PcyM_1026800 362 LHGRDVR|GD 0.391 . PcyM_1026800 368 RGDGSGR|GG 0.093 . PcyM_1026800 373 GRGGSGR|GG 0.147 . PcyM_1026800 378 GRGGSGR|GG 0.158 . PcyM_1026800 383 GRGGSGK|DG 0.092 . PcyM_1026800 388 GKDGSGR|DG 0.115 . PcyM_1026800 396 GSGTDGR|SW 0.279 . PcyM_1026800 403 SWDDGDR|GD 0.094 . PcyM_1026800 406 DGDRGDR|PG 0.155 . PcyM_1026800 429 IAGNSQR|ES 0.093 . PcyM_1026800 439 GINGICK|RA 0.061 . PcyM_1026800 440 INGICKR|AK 0.177 . PcyM_1026800 442 GICKRAK|LT 0.071 . PcyM_1026800 447 AKLTICK|AL 0.061 . PcyM_1026800 452 CKALNSR|NA 0.115 . PcyM_1026800 462 VVSDILK|CF 0.059 . PcyM_1026800 470 FNFCASK|EA 0.064 . PcyM_1026800 473 CASKEAK|II 0.106 . PcyM_1026800 483 ASFASTK|NY 0.061 . PcyM_1026800 493 SLFEALK|TL 0.060 . PcyM_1026800 498 LKTLEEK|NI 0.060 . PcyM_1026800 527 ECNLDVK|KV 0.069 . PcyM_1026800 528 CNLDVKK|VY 0.082 . PcyM_1026800 539 AYSLNLR|NL 0.097 . PcyM_1026800 583 IISTFPR|NK 0.120 . PcyM_1026800 585 STFPRNK|YA 0.080 . PcyM_1026800 612 VLSINAR|LS 0.101 . PcyM_1026800 623 EVIDLLR|GS 0.076 . PcyM_1026800 633 VQTESLR|SK 0.095 . PcyM_1026800 635 TESLRSK|VK 0.076 . PcyM_1026800 637 SLRSKVK|WG 0.070 . PcyM_1026800 645 GGFLDVR|HL 0.073 . PcyM_1026800 656 STIALSR|GE 0.083 . PcyM_1026800 663 GEAEAAR|E- 0.098 . ____________________________^_________________

  • Fasta :-

    >PcyM_1026800 ATGACGATTAGAAAGTACCACTACGCCTTCGTCTGCCTCCTCATTTCCGGGATGGTTAAC CATATGCCTGTTCAGTATAGAAGACACCCCATGCGTGACGTAACGGCGAGGAGAAAACAT CGAACTGTTCGTGACGACTGTGGAGAGGGAAGAGCCAGTTTTCTAATTTGCTTCCAAGGT AGGGTTTTGCGTGGTGCGTCTGCTGAGGTGCTCAAGGTGGGGGGATTTCAAACGGGGGTC GGTTCTTCCTCGCTGTCGTCCTCTCCGGCTTCTTCGCCGTCTTCTCCACCGCCTTCTTCT CCACCGCCTTCTTCTCCACCTTCTTCTCCACCTTCCTCGCCGCCTTCCCCCTCTGCCCAT TCCCCCCCACGAGGGGATCACCTTCTCCAAGAGGATCCACACCACATGGACGAAACCCTA ACCAAACTGAGAAAAAAAAAAATGATAATAAAATTTAAACAACAGGAAAACGCATCACAG TCTGCTCTCATTCAACAAAATATCGTCAACCTACTGGGGTCCTGCGGCAGAGTGAAGAAG TTGAGCCACATAGACCTTTACCTATATGAGACTTTTTCAAACATCAGCGAGAGAGCATTA AAGAATTGCCTGCAGCTGTTGAGCAGTGGGCCCGTGCTGGTCGAACAAGACTTCCAAATA CATGCCGTCGAGAGGGGAGGTTGCATGAGTGGCATGGTTGACAAGGGTGGTATCGTTGAC GTTGGTGACATGGCTGACAAGGGTGGCATCGTTGACGTGGGTGGCCTTTATGCGATCCGC GCGATTGGCGGAGAGGCCCCTGCTAGGAGCGGAACCAACCTACGGAGCCACGCTGGCAGC AACGGTACCTTTCAGCTGAACAACCAAATGGCGTTTAAGAATTTTTTGAGCAGACTTCAA AGCAACTACAAGGGGACGAATATTATTAATGGGTACGACCAAACGAAGATGAAGGAGGGC ACGGAGATGTCGGAGCCTCACGAGCAGAACGACGTGAACGTGTGCATCGTGGATACAGGG GTTGACTACAACCATAGGGATTTGCGGGGCAACGTTGTGCATGTGTTGCATGGCCGGGAT GTGAGAGGGGATGGAAGCGGTAGGGGAGGAAGCGGTAGGGGAGGAAGCGGTAGGGGAGGA AGCGGTAAGGATGGAAGCGGTAGGGATGGAAGCGGCACGGATGGCCGCAGCTGGGACGAC GGTGATCGCGGGGACCGCCCAGGCGGCATGGACAACCACGGGCACGGGACGTTCATAGCG GGGATCATCGCGGGAAACTCACAGAGAGAAAGTCAAGGAATTAACGGAATTTGCAAACGA GCTAAACTAACCATATGCAAAGCGCTCAACAGTAGGAACGCAGGTGTCGTGAGTGATATT TTAAAATGCTTTAATTTTTGCGCATCGAAAGAAGCAAAAATAATTAACGCCAGCTTTGCT AGTACAAAGAATTACGTATCGTTATTTGAGGCTTTGAAGACTCTCGAGGAAAAAAACATC CTTGTCGTTTCATCATCAGGCAACTGCTGCCCCACAACGGAATCCATGAACACATTTCCT GAGTGTAATTTAGACGTAAAGAAGGTATACCCTACGGCTTACTCTCTAAACCTACGTAAC CTTATCACCGTTTCGAATATGATTCAGCAAGAAAATGGACAAGTGATTCTATCTCCAGAT TCTTGTTACAGTGCCAACTATGTTCACTTAGCTGCTCCGGGAGACGATATAATATCCACC TTCCCACGGAATAAGTATGCAATTAGCAGCGGTTCGTCTTTCTCCGCTGCCGTGGTTACT GGTTTGGCTGCCCTGGTGTTGTCTATCAATGCTCGTTTGAGTTACGAGGAGGTGATTGAC TTGCTGCGTGGCTCCATTGTGCAAACGGAGTCCCTCCGGAGTAAGGTGAAGTGGGGGGGC TTTCTGGACGTGCGCCACCTGGTTAGCTCGACCATCGCGCTTTCGCGCGGGGAGGCGGAA GCAGCCAGGGAGTGA
  • Download Fasta

  • Fasta :-

    MTIRKYHYAFVCLLISGMVNHMPVQYRRHPMRDVTARRKHRTVRDDCGEGRASFLICFQG RVLRGASAEVLKVGGFQTGVGSSSLSSSPASSPSSPPPSSPPPSSPPSSPPSSPPSPSAH SPPRGDHLLQEDPHHMDETLTKLRKKKMIIKFKQQENASQSALIQQNIVNLLGSCGRVKK LSHIDLYLYETFSNISERALKNCLQLLSSGPVLVEQDFQIHAVERGGCMSGMVDKGGIVD VGDMADKGGIVDVGGLYAIRAIGGEAPARSGTNLRSHAGSNGTFQLNNQMAFKNFLSRLQ SNYKGTNIINGYDQTKMKEGTEMSEPHEQNDVNVCIVDTGVDYNHRDLRGNVVHVLHGRD VRGDGSGRGGSGRGGSGRGGSGKDGSGRDGSGTDGRSWDDGDRGDRPGGMDNHGHGTFIA GIIAGNSQRESQGINGICKRAKLTICKALNSRNAGVVSDILKCFNFCASKEAKIINASFA STKNYVSLFEALKTLEEKNILVVSSSGNCCPTTESMNTFPECNLDVKKVYPTAYSLNLRN LITVSNMIQQENGQVILSPDSCYSANYVHLAAPGDDIISTFPRNKYAISSGSSFSAAVVT GLAALVLSINARLSYEEVIDLLRGSIVQTESLRSKVKWGGFLDVRHLVSSTIALSRGEAE AARE

  • title: active site
  • coordinates: H415,F479,S593
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1026800109 SSPPSSPPSS0.993unspPcyM_1026800109 SSPPSSPPSS0.993unspPcyM_1026800109 SSPPSSPPSS0.993unspPcyM_1026800116 SSSPPSPSAH0.995unspPcyM_1026800121 SPSAHSPPRG0.997unspPcyM_1026800182 SVKKLSHIDL0.997unspPcyM_1026800381 SGRGGSGKDG0.998unspPcyM_1026800386 SGKDGSGRDG0.997unspPcyM_1026800391 SGRDGSGTDG0.997unspPcyM_1026800397 STDGRSWDDG0.997unspPcyM_1026800427 SIAGNSQRES0.99unspPcyM_1026800614 SNARLSYEEV0.998unspPcyM_1026800655 STIALSRGEA0.994unspPcyM_102680092 SSPASSPSSP0.996unspPcyM_102680095 SSSPSSPPPS0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India