PcyM_1218700 | SprT-like domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_1218700OTHER0.9999660.0000060.000028
No Results

  • Fasta :-

    >PcyM_1218700 MNDGLNKLTSVESEYLEKSGKKRRQKFLTPNDDVCVHQDGNFERNCLSTVQEEIKHNKEF ALPDAHVNDRRSVQGENPSCVEPNESCSLDAKVEEEDFETLEVIKQLSSIRIDSDSDSSV GGDKVVCNKKENTPKKRNKKKRGKNTITPLWDNSDVECVEDAIVYDESKDTDFPDLLQLF EEYNEKYFFNKLKSVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYRETLL HEMIHAFLFLTRSNSRHDGHGPEFKKHMYRINKVTGLCITIYHSFHKEVNFYRNHVWRCT GVCRTYPPHFGYVKRSMNRPPGPKEKWWRRHSSYCRGKFVKVEDAEAAKNSDTVHLSAAG NNPGILGKAMDSTRAKNKKTSAKDGFEKRADAVETELLNDAILIMDSKEQNVEKQKEVDQ LDIINLIKTLFSDNKQKVWSFPDLSVDYHKAFKNENYFEID
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1218700.fa Sequence name : PcyM_1218700 Sequence length : 461 VALUES OF COMPUTED PARAMETERS Coef20 : 3.139 CoefTot : -0.134 ChDiff : 7 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.088 1.018 0.149 0.301 MesoH : -1.319 0.081 -0.571 0.054 MuHd_075 : 33.608 14.314 9.097 4.757 MuHd_095 : 39.487 24.768 11.284 7.810 MuHd_100 : 37.120 22.936 9.949 7.214 MuHd_105 : 23.298 15.698 5.785 4.925 Hmax_075 : 4.550 5.017 -1.182 2.497 Hmax_095 : 5.800 8.700 -0.360 3.940 Hmax_100 : 4.100 8.500 -0.565 3.940 Hmax_105 : -3.500 2.400 -3.030 1.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8927 0.1073 DFMC : 0.9526 0.0474
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 461 PcyM_1218700 MNDGLNKLTSVESEYLEKSGKKRRQKFLTPNDDVCVHQDGNFERNCLSTVQEEIKHNKEFALPDAHVNDRRSVQGENPSC 80 VEPNESCSLDAKVEEEDFETLEVIKQLSSIRIDSDSDSSVGGDKVVCNKKENTPKKRNKKKRGKNTITPLWDNSDVECVE 160 DAIVYDESKDTDFPDLLQLFEEYNEKYFFNKLKSVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYRETLL 240 HEMIHAFLFLTRSNSRHDGHGPEFKKHMYRINKVTGLCITIYHSFHKEVNFYRNHVWRCTGVCRTYPPHFGYVKRSMNRP 320 PGPKEKWWRRHSSYCRGKFVKVEDAEAAKNSDTVHLSAAGNNPGILGKAMDSTRAKNKKTSAKDGFEKRADAVETELLND 400 AILIMDSKEQNVEKQKEVDQLDIINLIKTLFSDNKQKVWSFPDLSVDYHKAFKNENYFEID 480 ................................................................................ 80 .............................................................P.................. 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_1218700 7 MNDGLNK|LT 0.063 . PcyM_1218700 18 ESEYLEK|SG 0.069 . PcyM_1218700 21 YLEKSGK|KR 0.066 . PcyM_1218700 22 LEKSGKK|RR 0.076 . PcyM_1218700 23 EKSGKKR|RQ 0.178 . PcyM_1218700 24 KSGKKRR|QK 0.162 . PcyM_1218700 26 GKKRRQK|FL 0.225 . PcyM_1218700 44 QDGNFER|NC 0.085 . PcyM_1218700 55 TVQEEIK|HN 0.059 . PcyM_1218700 58 EEIKHNK|EF 0.059 . PcyM_1218700 70 DAHVNDR|RS 0.102 . PcyM_1218700 71 AHVNDRR|SV 0.349 . PcyM_1218700 92 SCSLDAK|VE 0.069 . PcyM_1218700 105 ETLEVIK|QL 0.066 . PcyM_1218700 111 KQLSSIR|ID 0.095 . PcyM_1218700 124 SSVGGDK|VV 0.069 . PcyM_1218700 129 DKVVCNK|KE 0.055 . PcyM_1218700 130 KVVCNKK|EN 0.091 . PcyM_1218700 135 KKENTPK|KR 0.068 . PcyM_1218700 136 KENTPKK|RN 0.126 . PcyM_1218700 137 ENTPKKR|NK 0.185 . PcyM_1218700 139 TPKKRNK|KK 0.081 . PcyM_1218700 140 PKKRNKK|KR 0.363 . PcyM_1218700 141 KKRNKKK|RG 0.119 . PcyM_1218700 142 KRNKKKR|GK 0.578 *ProP* PcyM_1218700 144 NKKKRGK|NT 0.070 . PcyM_1218700 169 IVYDESK|DT 0.062 . PcyM_1218700 186 FEEYNEK|YF 0.067 . PcyM_1218700 191 EKYFFNK|LK 0.079 . PcyM_1218700 193 YFFNKLK|SV 0.112 . PcyM_1218700 198 LKSVQVK|WS 0.085 . PcyM_1218700 202 QVKWSNK|MK 0.060 . PcyM_1218700 204 KWSNKMK|LC 0.075 . PcyM_1218700 213 AGICIFK|KS 0.058 . PcyM_1218700 214 GICIFKK|SG 0.129 . PcyM_1218700 221 SGYCCIR|LS 0.078 . PcyM_1218700 228 LSLPLLK|LR 0.058 . PcyM_1218700 230 LPLLKLR|KI 0.096 . PcyM_1218700 231 PLLKLRK|IK 0.074 . PcyM_1218700 233 LKLRKIK|EY 0.152 . PcyM_1218700 236 RKIKEYR|ET 0.100 . PcyM_1218700 252 AFLFLTR|SN 0.132 . PcyM_1218700 256 LTRSNSR|HD 0.106 . PcyM_1218700 265 GHGPEFK|KH 0.062 . PcyM_1218700 266 HGPEFKK|HM 0.094 . PcyM_1218700 270 FKKHMYR|IN 0.093 . PcyM_1218700 273 HMYRINK|VT 0.137 . PcyM_1218700 287 IYHSFHK|EV 0.088 . PcyM_1218700 293 KEVNFYR|NH 0.076 . PcyM_1218700 298 YRNHVWR|CT 0.222 . PcyM_1218700 304 RCTGVCR|TY 0.086 . PcyM_1218700 314 PHFGYVK|RS 0.056 . PcyM_1218700 315 HFGYVKR|SM 0.265 . PcyM_1218700 319 VKRSMNR|PP 0.123 . PcyM_1218700 324 NRPPGPK|EK 0.063 . PcyM_1218700 326 PPGPKEK|WW 0.072 . PcyM_1218700 329 PKEKWWR|RH 0.098 . PcyM_1218700 330 KEKWWRR|HS 0.188 . PcyM_1218700 336 RHSSYCR|GK 0.114 . PcyM_1218700 338 SSYCRGK|FV 0.095 . PcyM_1218700 341 CRGKFVK|VE 0.072 . PcyM_1218700 349 EDAEAAK|NS 0.071 . PcyM_1218700 368 NPGILGK|AM 0.066 . PcyM_1218700 374 KAMDSTR|AK 0.107 . PcyM_1218700 376 MDSTRAK|NK 0.081 . PcyM_1218700 378 STRAKNK|KT 0.093 . PcyM_1218700 379 TRAKNKK|TS 0.158 . PcyM_1218700 383 NKKTSAK|DG 0.091 . PcyM_1218700 388 AKDGFEK|RA 0.084 . PcyM_1218700 389 KDGFEKR|AD 0.168 . PcyM_1218700 408 ILIMDSK|EQ 0.057 . PcyM_1218700 414 KEQNVEK|QK 0.074 . PcyM_1218700 416 QNVEKQK|EV 0.083 . PcyM_1218700 428 DIINLIK|TL 0.061 . PcyM_1218700 435 TLFSDNK|QK 0.066 . PcyM_1218700 437 FSDNKQK|VW 0.063 . PcyM_1218700 450 LSVDYHK|AF 0.063 . PcyM_1218700 453 DYHKAFK|NE 0.058 . ____________________________^_________________

  • Fasta :-

    >PcyM_1218700 ATGAACGACGGACTCAACAAACTAACCTCCGTCGAGAGCGAGTACCTAGAGAAGAGCGGG AAAAAAAGAAGACAAAAATTCTTAACTCCAAATGATGATGTCTGTGTCCACCAGGATGGG AATTTTGAACGAAACTGCTTGTCCACTGTCCAAGAGGAAATAAAACACAACAAGGAATTT GCCCTCCCCGATGCCCATGTAAATGATAGGAGGTCGGTCCAAGGAGAAAATCCCTCCTGC GTTGAGCCAAATGAAAGCTGTTCCTTAGATGCAAAAGTGGAGGAAGAAGATTTTGAGACC CTTGAAGTGATAAAGCAGCTCAGTTCCATTCGTATCGACTCAGACTCGGACAGCTCCGTC GGGGGAGATAAGGTGGTTTGTAATAAAAAGGAAAATACACCAAAAAAGCGGAACAAAAAA AAAAGGGGGAAAAACACAATTACACCCTTGTGGGATAACTCGGATGTGGAATGTGTGGAG GATGCCATCGTGTACGATGAGTCCAAGGACACCGATTTCCCAGACCTACTGCAACTCTTC GAGGAATACAACGAGAAGTATTTTTTTAACAAATTAAAGTCAGTGCAGGTGAAGTGGAGC AACAAAATGAAGTTATGCGCAGGGATATGCATATTTAAGAAATCAGGCTACTGCTGCATT CGGCTATCCCTCCCCCTTCTGAAGCTGCGGAAGATAAAGGAGTACCGGGAGACCCTACTG CATGAAATGATTCATGCGTTCCTCTTTCTTACGAGAAGCAATTCTCGACATGATGGGCAC GGACCGGAGTTCAAAAAGCACATGTACAGAATTAACAAAGTGACGGGGCTGTGCATTACG ATATATCACAGCTTTCACAAGGAGGTGAATTTTTACAGGAACCATGTCTGGCGGTGCACG GGTGTCTGCAGAACATATCCTCCCCACTTTGGGTACGTCAAAAGGTCTATGAATAGACCC CCCGGGCCCAAGGAAAAGTGGTGGAGAAGGCACTCCTCGTACTGCCGCGGCAAGTTCGTT AAAGTGGAAGACGCAGAAGCGGCTAAGAATTCAGACACGGTACATTTGAGCGCGGCGGGG AACAACCCGGGCATACTTGGGAAGGCGATGGACTCGACGCGCGCGAAGAATAAGAAGACG AGCGCGAAAGACGGGTTCGAAAAAAGGGCAGACGCTGTAGAGACAGAACTGCTGAACGAC GCCATACTCATTATGGATTCTAAGGAGCAAAATGTGGAGAAGCAAAAAGAGGTGGACCAA CTGGACATCATTAATTTAATAAAAACTCTGTTTAGTGACAACAAGCAGAAGGTATGGTCC TTCCCGGATCTCTCCGTTGACTATCACAAGGCTTTCAAAAATGAAAATTACTTTGAAATA GACTAA
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  • Fasta :-

    MNDGLNKLTSVESEYLEKSGKKRRQKFLTPNDDVCVHQDGNFERNCLSTVQEEIKHNKEF ALPDAHVNDRRSVQGENPSCVEPNESCSLDAKVEEEDFETLEVIKQLSSIRIDSDSDSSV GGDKVVCNKKENTPKKRNKKKRGKNTITPLWDNSDVECVEDAIVYDESKDTDFPDLLQLF EEYNEKYFFNKLKSVQVKWSNKMKLCAGICIFKKSGYCCIRLSLPLLKLRKIKEYRETLL HEMIHAFLFLTRSNSRHDGHGPEFKKHMYRINKVTGLCITIYHSFHKEVNFYRNHVWRCT GVCRTYPPHFGYVKRSMNRPPGPKEKWWRRHSSYCRGKFVKVEDAEAAKNSDTVHLSAAG NNPGILGKAMDSTRAKNKKTSAKDGFEKRADAVETELLNDAILIMDSKEQNVEKQKEVDQ LDIINLIKTLFSDNKQKVWSFPDLSVDYHKAFKNENYFEID

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1218700255 STRSNSRHDG0.997unspPcyM_1218700255 STRSNSRHDG0.997unspPcyM_1218700255 STRSNSRHDG0.997unspPcyM_1218700381 SNKKTSAKDG0.998unspPcyM_1218700114 SIRIDSDSDS0.997unspPcyM_1218700119 SDSDSSVGGD0.992unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India