PcyM_1235800 | plasmepsin V, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_1235800SP0.0080910.9919000.000009CS pos: 34-35. AEC-KR. Pr: 0.7751
No Results

  • Fasta :-

    >PcyM_1235800 MGTARYGNPGCGSLSRIIHLVLYVLTLYALNAECKREPVEGQTKDLLYKYKLYGDIDEYA YYFIDIDIGTPEQRISLILDTGSSSLSFPCAGCKNCGVHMENPFNLNNSKTSSILYCDEN EECPFKLNCVKGKCEYMQSYCEGSQISGFYFSDVVSVMSYNNEKISFRKLMGCHMHEESL FLYQQATGVLGMSLSKPQGIPTFINLLFGNAPQLKEVFTICISENGGELIAGGYDPAYIV RKGKEQSQGQGQSLGQGQSQGKEQAAQQGEPKQRGGDSPTREDPELALRDAEKIVWESVT RKYYYYIRVRGLDLFGTNMMSTSKGLEMLVDSGSTFTHIPEDLYNKLNYFFDILCIQDMN NAYDVNKRLKITKESLNNPLVQFDDFRKSLKTIISKENMCVKIVEGVQCWKSLEGLPDLF VTLSKNYKMKWQPHSYLYKKESFWCKGIEKQVNNKPILGLTFFKNRQVIFDLQKNRIGFV DSNCPSHPTHTRPRTYNEYKRKDNIFLKIPFFYLYSLFVVFALSILLSLVFYVKRLYHME YNALPSEGKAPADA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1235800.fa Sequence name : PcyM_1235800 Sequence length : 554 VALUES OF COMPUTED PARAMETERS Coef20 : 3.676 CoefTot : -0.582 ChDiff : 4 ZoneTo : 32 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.394 2.800 0.464 0.907 MesoH : -0.153 0.309 -0.305 0.284 MuHd_075 : 16.722 10.790 4.559 4.355 MuHd_095 : 34.852 25.790 9.939 8.883 MuHd_100 : 38.404 29.494 11.680 9.647 MuHd_105 : 35.731 29.470 11.345 9.275 Hmax_075 : 5.800 9.700 1.692 2.890 Hmax_095 : 13.737 24.200 4.093 6.405 Hmax_100 : 15.600 24.600 5.412 6.250 Hmax_105 : 15.050 27.500 4.969 6.280 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9321 0.0679 DFMC : 0.9648 0.0352
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 554 PcyM_1235800 MGTARYGNPGCGSLSRIIHLVLYVLTLYALNAECKREPVEGQTKDLLYKYKLYGDIDEYAYYFIDIDIGTPEQRISLILD 80 TGSSSLSFPCAGCKNCGVHMENPFNLNNSKTSSILYCDENEECPFKLNCVKGKCEYMQSYCEGSQISGFYFSDVVSVMSY 160 NNEKISFRKLMGCHMHEESLFLYQQATGVLGMSLSKPQGIPTFINLLFGNAPQLKEVFTICISENGGELIAGGYDPAYIV 240 RKGKEQSQGQGQSLGQGQSQGKEQAAQQGEPKQRGGDSPTREDPELALRDAEKIVWESVTRKYYYYIRVRGLDLFGTNMM 320 STSKGLEMLVDSGSTFTHIPEDLYNKLNYFFDILCIQDMNNAYDVNKRLKITKESLNNPLVQFDDFRKSLKTIISKENMC 400 VKIVEGVQCWKSLEGLPDLFVTLSKNYKMKWQPHSYLYKKESFWCKGIEKQVNNKPILGLTFFKNRQVIFDLQKNRIGFV 480 DSNCPSHPTHTRPRTYNEYKRKDNIFLKIPFFYLYSLFVVFALSILLSLVFYVKRLYHMEYNALPSEGKAPADA 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1235800 5 --MGTAR|YG 0.112 . PcyM_1235800 16 GCGSLSR|II 0.099 . PcyM_1235800 35 ALNAECK|RE 0.064 . PcyM_1235800 36 LNAECKR|EP 0.149 . PcyM_1235800 44 PVEGQTK|DL 0.061 . PcyM_1235800 49 TKDLLYK|YK 0.065 . PcyM_1235800 51 DLLYKYK|LY 0.082 . PcyM_1235800 74 IGTPEQR|IS 0.072 . PcyM_1235800 94 FPCAGCK|NC 0.068 . PcyM_1235800 110 FNLNNSK|TS 0.061 . PcyM_1235800 126 NEECPFK|LN 0.064 . PcyM_1235800 131 FKLNCVK|GK 0.065 . PcyM_1235800 133 LNCVKGK|CE 0.074 . PcyM_1235800 164 MSYNNEK|IS 0.071 . PcyM_1235800 168 NEKISFR|KL 0.104 . PcyM_1235800 169 EKISFRK|LM 0.094 . PcyM_1235800 196 LGMSLSK|PQ 0.059 . PcyM_1235800 215 GNAPQLK|EV 0.091 . PcyM_1235800 241 DPAYIVR|KG 0.083 . PcyM_1235800 242 PAYIVRK|GK 0.140 . PcyM_1235800 244 YIVRKGK|EQ 0.256 . PcyM_1235800 262 QGQSQGK|EQ 0.069 . PcyM_1235800 272 AQQGEPK|QR 0.071 . PcyM_1235800 274 QGEPKQR|GG 0.092 . PcyM_1235800 281 GGDSPTR|ED 0.065 . PcyM_1235800 289 DPELALR|DA 0.129 . PcyM_1235800 293 ALRDAEK|IV 0.084 . PcyM_1235800 301 VWESVTR|KY 0.076 . PcyM_1235800 302 WESVTRK|YY 0.115 . PcyM_1235800 308 KYYYYIR|VR 0.079 . PcyM_1235800 310 YYYIRVR|GL 0.088 . PcyM_1235800 324 NMMSTSK|GL 0.069 . PcyM_1235800 346 PEDLYNK|LN 0.051 . PcyM_1235800 367 NAYDVNK|RL 0.061 . PcyM_1235800 368 AYDVNKR|LK 0.147 . PcyM_1235800 370 DVNKRLK|IT 0.072 . PcyM_1235800 373 KRLKITK|ES 0.060 . PcyM_1235800 387 VQFDDFR|KS 0.075 . PcyM_1235800 388 QFDDFRK|SL 0.113 . PcyM_1235800 391 DFRKSLK|TI 0.075 . PcyM_1235800 396 LKTIISK|EN 0.059 . PcyM_1235800 402 KENMCVK|IV 0.113 . PcyM_1235800 411 EGVQCWK|SL 0.079 . PcyM_1235800 425 LFVTLSK|NY 0.055 . PcyM_1235800 428 TLSKNYK|MK 0.074 . PcyM_1235800 430 SKNYKMK|WQ 0.080 . PcyM_1235800 439 PHSYLYK|KE 0.068 . PcyM_1235800 440 HSYLYKK|ES 0.101 . PcyM_1235800 446 KESFWCK|GI 0.116 . PcyM_1235800 450 WCKGIEK|QV 0.069 . PcyM_1235800 455 EKQVNNK|PI 0.061 . PcyM_1235800 464 LGLTFFK|NR 0.059 . PcyM_1235800 466 LTFFKNR|QV 0.109 . PcyM_1235800 474 VIFDLQK|NR 0.056 . PcyM_1235800 476 FDLQKNR|IG 0.072 . PcyM_1235800 492 SHPTHTR|PR 0.083 . PcyM_1235800 494 PTHTRPR|TY 0.089 . PcyM_1235800 500 RTYNEYK|RK 0.068 . PcyM_1235800 501 TYNEYKR|KD 0.167 . PcyM_1235800 502 YNEYKRK|DN 0.092 . PcyM_1235800 508 KDNIFLK|IP 0.067 . PcyM_1235800 534 SLVFYVK|RL 0.065 . PcyM_1235800 535 LVFYVKR|LY 0.158 . PcyM_1235800 549 ALPSEGK|AP 0.064 . ____________________________^_________________

  • Fasta :-

    >PcyM_1235800 ATGGGCACAGCCAGGTATGGGAACCCCGGTTGCGGCTCCCTTTCCCGTATCATCCATCTA GTCCTGTATGTGCTAACCCTCTATGCGTTGAATGCAGAGTGCAAAAGAGAACCAGTGGAG GGTCAAACCAAAGACCTCCTGTATAAGTACAAGCTATATGGAGACATAGACGAGTATGCG TACTACTTCATAGATATAGATATTGGTACCCCGGAGCAAAGAATTTCGTTGATTTTAGAC ACGGGGTCATCCTCGTTGAGCTTCCCATGTGCAGGGTGCAAGAATTGCGGAGTGCACATG GAAAACCCCTTTAACTTGAATAACTCTAAAACGTCATCCATTCTGTATTGTGATGAAAAT GAGGAGTGTCCTTTTAAGCTGAACTGTGTTAAGGGGAAATGTGAATATATGCAGTCCTAC TGTGAGGGTTCTCAAATTAGTGGATTTTATTTCTCAGATGTAGTGAGTGTGATGTCATAC AATAATGAGAAAATAAGCTTTAGGAAGCTTATGGGGTGTCACATGCATGAGGAGAGTCTC TTTCTATACCAGCAGGCGACTGGCGTTTTAGGTATGAGTCTTTCTAAGCCGCAGGGTATT CCCACATTTATCAATTTGCTGTTTGGGAATGCCCCGCAGCTGAAGGAGGTGTTTACCATT TGTATTTCTGAAAATGGGGGCGAGCTGATCGCGGGGGGGTACGACCCGGCCTACATCGTG CGCAAGGGGAAGGAGCAGTCACAGGGGCAGGGGCAGTCACTGGGGCAGGGGCAGTCACAG GGGAAGGAGCAGGCCGCCCAGCAGGGTGAGCCCAAGCAGCGGGGGGGGGACTCCCCGACA AGGGAAGACCCAGAACTGGCACTGCGTGATGCAGAAAAAATCGTATGGGAAAGTGTGACA AGGAAGTACTACTACTACATAAGAGTGAGGGGATTGGACCTGTTTGGAACCAACATGATG AGTACAAGTAAGGGACTCGAAATGCTTGTGGATTCAGGAAGTACATTCACGCACATTCCA GAAGACCTGTACAATAAATTAAATTACTTCTTTGATATACTTTGCATTCAAGACATGAAT AACGCGTATGATGTTAATAAAAGGTTAAAAATTACAAAAGAGTCGCTTAATAACCCTTTG GTCCAATTCGATGATTTTAGGAAGTCCTTAAAGACTATCATATCGAAGGAGAACATGTGC GTTAAAATAGTGGAGGGAGTGCAGTGTTGGAAGTCCCTGGAGGGGTTACCCGATCTGTTT GTTACTCTATCGAAGAACTACAAAATGAAGTGGCAACCACATTCGTATCTCTACAAGAAG GAAAGCTTTTGGTGTAAGGGCATAGAGAAACAGGTAAATAATAAGCCCATATTAGGGTTA ACTTTTTTTAAGAACAGACAAGTAATTTTCGACTTGCAGAAGAATCGCATCGGGTTTGTC GACTCCAATTGTCCGTCTCATCCGACTCATACTAGACCTAGGACTTATAATGAGTACAAA AGGAAGGACAACATATTTTTAAAAATTCCTTTTTTTTACCTGTACAGCCTTTTTGTTGTG TTCGCCCTGAGCATATTGCTGTCTCTGGTGTTCTACGTCAAGCGGCTGTACCACATGGAG TACAACGCGCTCCCCTCCGAGGGGAAGGCACCGGCGGACGCGTAG
  • Download Fasta

  • Fasta :-

    MGTARYGNPGCGSLSRIIHLVLYVLTLYALNAECKREPVEGQTKDLLYKYKLYGDIDEYA YYFIDIDIGTPEQRISLILDTGSSSLSFPCAGCKNCGVHMENPFNLNNSKTSSILYCDEN EECPFKLNCVKGKCEYMQSYCEGSQISGFYFSDVVSVMSYNNEKISFRKLMGCHMHEESL FLYQQATGVLGMSLSKPQGIPTFINLLFGNAPQLKEVFTICISENGGELIAGGYDPAYIV RKGKEQSQGQGQSLGQGQSQGKEQAAQQGEPKQRGGDSPTREDPELALRDAEKIVWESVT RKYYYYIRVRGLDLFGTNMMSTSKGLEMLVDSGSTFTHIPEDLYNKLNYFFDILCIQDMN NAYDVNKRLKITKESLNNPLVQFDDFRKSLKTIISKENMCVKIVEGVQCWKSLEGLPDLF VTLSKNYKMKWQPHSYLYKKESFWCKGIEKQVNNKPILGLTFFKNRQVIFDLQKNRIGFV DSNCPSHPTHTRPRTYNEYKRKDNIFLKIPFFYLYSLFVVFALSILLSLVFYVKRLYHME YNALPSEGKAPADA

  • title: catalytic residue
  • coordinates: D80,D331
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1235800278 SRGGDSPTRE0.993unspPcyM_1235800389 SDFRKSLKTI0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India