PcyM_1255400 | vivapain-1

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1255400OTHER0.9998810.0000780.000041
No Results

  • Fasta :-

    >PcyM_1255400 MTQDIKIMNLTKSSLDALNRNQMLSKKSNRKIVKICMYTILTFVMCGVVYICFTVMSSND ESINQIDNLKGPSFTPGDGNILNKDEIETLKFIFSNYPHGEKNIAGDEVKTLADSTIPNV EDQKIKIADAGKHIKLMKKYNEIVEDMSEENKEELTKMLRELLKKKMNKKKKQKKDPNGN GEEGKEVINMSSPNFNYKKVSDNQDNNDEDEEVSVAQIEDLFFNLKYASKFFNFMKKYNR SYKDITEQMEKYKNFKMNYLKIKKHNETNQMYKMRLNQFSDYSKKDFESYFKKLLPIPDH LKKKYVVPFGSMNNGKDKKVDSNKSANLFTDVPEILDYREKGIVHEPKDQGLCGSCWAFA SVGNVECMYAKEHNKTILTLSEQEVVDCSKLNFGCDGGHPFYSFIYAIENGICLGSDYKY IAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFYDGGIFNG TCTEELNHSVLLVGYGQVPSSRIFQQNNVYDDATGVTKKGARTSPSKADDGIQYYWIIKN SWSKNWGENGFMRISRNKEGDNVFCGIGVEVFYPIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1255400.fa Sequence name : PcyM_1255400 Sequence length : 576 VALUES OF COMPUTED PARAMETERS Coef20 : 4.218 CoefTot : -0.155 ChDiff : 3 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.371 2.406 0.592 0.776 MesoH : -0.520 0.274 -0.313 0.227 MuHd_075 : 9.371 8.945 3.598 2.571 MuHd_095 : 16.151 8.417 4.617 2.397 MuHd_100 : 18.103 13.542 5.651 4.117 MuHd_105 : 27.565 19.318 7.857 5.986 Hmax_075 : 9.217 11.317 0.287 3.827 Hmax_095 : 9.200 10.900 0.824 3.620 Hmax_100 : 8.000 11.700 0.468 3.930 Hmax_105 : 7.088 9.537 -0.014 3.281 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9771 0.0229 DFMC : 0.9808 0.0192
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 576 PcyM_1255400 MTQDIKIMNLTKSSLDALNRNQMLSKKSNRKIVKICMYTILTFVMCGVVYICFTVMSSNDESINQIDNLKGPSFTPGDGN 80 ILNKDEIETLKFIFSNYPHGEKNIAGDEVKTLADSTIPNVEDQKIKIADAGKHIKLMKKYNEIVEDMSEENKEELTKMLR 160 ELLKKKMNKKKKQKKDPNGNGEEGKEVINMSSPNFNYKKVSDNQDNNDEDEEVSVAQIEDLFFNLKYASKFFNFMKKYNR 240 SYKDITEQMEKYKNFKMNYLKIKKHNETNQMYKMRLNQFSDYSKKDFESYFKKLLPIPDHLKKKYVVPFGSMNNGKDKKV 320 DSNKSANLFTDVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDCSKLNFGCDGGHP 400 FYSFIYAIENGICLGSDYKYIAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFYDGGIFNG 480 TCTEELNHSVLLVGYGQVPSSRIFQQNNVYDDATGVTKKGARTSPSKADDGIQYYWIIKNSWSKNWGENGFMRISRNKEG 560 DNVFCGIGVEVFYPIL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1255400 6 -MTQDIK|IM 0.052 . PcyM_1255400 12 KIMNLTK|SS 0.084 . PcyM_1255400 20 SLDALNR|NQ 0.076 . PcyM_1255400 26 RNQMLSK|KS 0.067 . PcyM_1255400 27 NQMLSKK|SN 0.172 . PcyM_1255400 30 LSKKSNR|KI 0.112 . PcyM_1255400 31 SKKSNRK|IV 0.117 . PcyM_1255400 34 SNRKIVK|IC 0.072 . PcyM_1255400 70 NQIDNLK|GP 0.059 . PcyM_1255400 84 DGNILNK|DE 0.073 . PcyM_1255400 91 DEIETLK|FI 0.069 . PcyM_1255400 102 NYPHGEK|NI 0.056 . PcyM_1255400 110 IAGDEVK|TL 0.061 . PcyM_1255400 124 PNVEDQK|IK 0.057 . PcyM_1255400 126 VEDQKIK|IA 0.086 . PcyM_1255400 132 KIADAGK|HI 0.063 . PcyM_1255400 135 DAGKHIK|LM 0.062 . PcyM_1255400 138 KHIKLMK|KY 0.074 . PcyM_1255400 139 HIKLMKK|YN 0.165 . PcyM_1255400 152 DMSEENK|EE 0.059 . PcyM_1255400 157 NKEELTK|ML 0.066 . PcyM_1255400 160 ELTKMLR|EL 0.070 . PcyM_1255400 164 MLRELLK|KK 0.062 . PcyM_1255400 165 LRELLKK|KM 0.100 . PcyM_1255400 166 RELLKKK|MN 0.092 . PcyM_1255400 169 LKKKMNK|KK 0.067 . PcyM_1255400 170 KKKMNKK|KK 0.108 . PcyM_1255400 171 KKMNKKK|KQ 0.123 . PcyM_1255400 172 KMNKKKK|QK 0.146 . PcyM_1255400 174 NKKKKQK|KD 0.068 . PcyM_1255400 175 KKKKQKK|DP 0.161 . PcyM_1255400 185 GNGEEGK|EV 0.074 . PcyM_1255400 198 SPNFNYK|KV 0.130 . PcyM_1255400 199 PNFNYKK|VS 0.098 . PcyM_1255400 226 DLFFNLK|YA 0.077 . PcyM_1255400 230 NLKYASK|FF 0.061 . PcyM_1255400 236 KFFNFMK|KY 0.070 . PcyM_1255400 237 FFNFMKK|YN 0.112 . PcyM_1255400 240 FMKKYNR|SY 0.153 . PcyM_1255400 243 KYNRSYK|DI 0.333 . PcyM_1255400 251 ITEQMEK|YK 0.061 . PcyM_1255400 253 EQMEKYK|NF 0.064 . PcyM_1255400 256 EKYKNFK|MN 0.066 . PcyM_1255400 261 FKMNYLK|IK 0.066 . PcyM_1255400 263 MNYLKIK|KH 0.071 . PcyM_1255400 264 NYLKIKK|HN 0.096 . PcyM_1255400 273 ETNQMYK|MR 0.065 . PcyM_1255400 275 NQMYKMR|LN 0.100 . PcyM_1255400 284 QFSDYSK|KD 0.061 . PcyM_1255400 285 FSDYSKK|DF 0.139 . PcyM_1255400 292 DFESYFK|KL 0.060 . PcyM_1255400 293 FESYFKK|LL 0.097 . PcyM_1255400 302 PIPDHLK|KK 0.059 . PcyM_1255400 303 IPDHLKK|KY 0.093 . PcyM_1255400 304 PDHLKKK|YV 0.225 . PcyM_1255400 316 GSMNNGK|DK 0.070 . PcyM_1255400 318 MNNGKDK|KV 0.101 . PcyM_1255400 319 NNGKDKK|VD 0.091 . PcyM_1255400 324 KKVDSNK|SA 0.090 . PcyM_1255400 339 PEILDYR|EK 0.081 . PcyM_1255400 341 ILDYREK|GI 0.068 . PcyM_1255400 348 GIVHEPK|DQ 0.093 . PcyM_1255400 371 VECMYAK|EH 0.062 . PcyM_1255400 375 YAKEHNK|TI 0.062 . PcyM_1255400 390 EVVDCSK|LN 0.061 . PcyM_1255400 419 CLGSDYK|YI 0.060 . PcyM_1255400 432 LFCLNYR|CK 0.086 . PcyM_1255400 434 CLNYRCK|NK 0.061 . PcyM_1255400 436 NYRCKNK|VT 0.065 . PcyM_1255400 446 SSVGGVK|EN 0.063 . PcyM_1255400 452 KENELIR|AL 0.115 . PcyM_1255400 502 GQVPSSR|IF 0.086 . PcyM_1255400 518 DATGVTK|KG 0.055 . PcyM_1255400 519 ATGVTKK|GA 0.163 . PcyM_1255400 522 VTKKGAR|TS 0.078 . PcyM_1255400 527 ARTSPSK|AD 0.070 . PcyM_1255400 539 QYYWIIK|NS 0.058 . PcyM_1255400 544 IKNSWSK|NW 0.087 . PcyM_1255400 553 GENGFMR|IS 0.132 . PcyM_1255400 556 GFMRISR|NK 0.239 . PcyM_1255400 558 MRISRNK|EG 0.075 . ____________________________^_________________

  • Fasta :-

    >PcyM_1255400 ATGACGCAGGATATCAAAATCATGAACCTGACCAAGTCCAGCTTGGATGCCCTGAACAGA AACCAAATGCTCTCCAAAAAGAGCAATAGGAAAATTGTGAAGATATGCATGTACACAATT CTGACATTTGTGATGTGCGGTGTAGTGTACATTTGCTTCACGGTGATGTCGAGCAATGAT GAGAGCATTAACCAGATCGACAACCTGAAAGGTCCTTCTTTCACCCCTGGTGATGGAAAT ATCCTCAACAAGGATGAAATAGAAACGCTGAAATTTATCTTTTCAAATTACCCTCATGGG GAGAAAAATATCGCTGGTGATGAAGTGAAAACACTAGCAGATTCCACCATACCTAATGTA GAGGATCAAAAGATAAAAATTGCAGACGCGGGAAAGCACATCAAATTGATGAAGAAGTAT AACGAAATTGTGGAGGACATGAGTGAGGAGAATAAAGAAGAGTTAACAAAAATGTTGAGG GAACTTTTGAAAAAAAAAATGAATAAGAAGAAAAAACAAAAAAAAGACCCAAATGGTAAT GGTGAAGAAGGGAAAGAAGTTATCAATATGAGTTCACCCAATTTTAATTACAAGAAGGTC AGCGACAACCAAGATAATAATGACGAAGACGAAGAGGTGAGTGTGGCACAAATCGAAGAC CTATTCTTCAACCTGAAATACGCGTCGAAATTTTTTAACTTCATGAAAAAGTATAACAGA AGCTATAAAGACATCACTGAACAGATGGAGAAATATAAAAATTTCAAAATGAATTATCTC AAAATTAAGAAGCACAACGAAACGAACCAAATGTACAAAATGAGATTAAACCAGTTTAGC GATTATTCGAAGAAAGATTTCGAGAGTTATTTTAAAAAATTGCTACCCATTCCGGATCAC TTGAAGAAGAAATATGTAGTACCTTTCGGTTCCATGAATAACGGAAAAGATAAAAAAGTG GATAGCAACAAAAGTGCAAACCTTTTCACCGATGTGCCAGAAATTTTGGACTATAGAGAA AAAGGAATTGTACATGAACCGAAGGATCAAGGATTATGTGGTTCGTGTTGGGCATTCGCT AGTGTAGGAAATGTGGAATGTATGTATGCCAAGGAACATAACAAAACCATTTTAACTCTT AGCGAACAAGAAGTTGTGGATTGTTCAAAATTAAATTTCGGATGTGATGGTGGACACCCA TTTTATTCATTCATCTATGCTATCGAAAATGGAATATGCTTAGGCAGTGATTATAAATAC ATAGCTATGGATAATTTATTTTGCCTAAATTATAGATGTAAGAATAAAGTTACTCTCTCC TCTGTTGGTGGGGTGAAAGAAAACGAATTGATACGTGCATTAAATGAAGTAGGTCCAGTA TCTGTTAATGTCGGTGTAACGGATGATTTCTCCTTTTACGATGGAGGGATATTTAATGGC ACATGCACGGAAGAATTAAACCACTCCGTTCTTCTTGTCGGTTATGGCCAAGTGCCGAGC AGCAGAATCTTTCAACAAAATAATGTGTATGATGATGCCACTGGAGTCACGAAAAAGGGA GCGCGAACCTCGCCATCAAAGGCCGATGATGGTATTCAGTACTACTGGATTATCAAAAAT TCGTGGAGTAAAAATTGGGGAGAAAACGGATTCATGAGAATTAGTCGAAACAAGGAGGGA GACAACGTGTTTTGTGGAATCGGTGTAGAGGTTTTCTATCCCATTTTGTAA
  • Download Fasta

  • Fasta :-

    MTQDIKIMNLTKSSLDALNRNQMLSKKSNRKIVKICMYTILTFVMCGVVYICFTVMSSND ESINQIDNLKGPSFTPGDGNILNKDEIETLKFIFSNYPHGEKNIAGDEVKTLADSTIPNV EDQKIKIADAGKHIKLMKKYNEIVEDMSEENKEELTKMLRELLKKKMNKKKKQKKDPNGN GEEGKEVINMSSPNFNYKKVSDNQDNNDEDEEVSVAQIEDLFFNLKYASKFFNFMKKYNR SYKDITEQMEKYKNFKMNYLKIKKHNETNQMYKMRLNQFSDYSKKDFESYFKKLLPIPDH LKKKYVVPFGSMNNGKDKKVDSNKSANLFTDVPEILDYREKGIVHEPKDQGLCGSCWAFA SVGNVECMYAKEHNKTILTLSEQEVVDCSKLNFGCDGGHPFYSFIYAIENGICLGSDYKY IAMDNLFCLNYRCKNKVTLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFYDGGIFNG TCTEELNHSVLLVGYGQVPSSRIFQQNNVYDDATGVTKKGARTSPSKADDGIQYYWIIKN SWSKNWGENGFMRISRNKEGDNVFCGIGVEVFYPIL

  • title: active site
  • coordinates: Q350,C356,H488,N540
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1255400241 SKYNRSYKDI0.996unspPcyM_1255400241 SKYNRSYKDI0.996unspPcyM_1255400241 SKYNRSYKDI0.996unspPcyM_1255400283 SFSDYSKKDF0.996unspPcyM_1255400524 SGARTSPSKA0.997unspPcyM_125540025 SNQMLSKKSN0.994unspPcyM_1255400148 SVEDMSEENK0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India