PcyM_1260600 | aminopeptidase P, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0016787      

  • Computed_GO_Functions:  hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1260600OTHER0.6318610.3524020.015737
No Results

  • Fasta :-

    >PcyM_1260600 MRVNSLLYALSSLMVFHLNFFYKGNRVNYVSAYINSIHKYTNYGNGSNNVGGNRGGNGSS NRGSNGGNNGGQNNPNNVGRHKIDANGASNRSVTSYFKKKFPQIYQQNGASISSVAGDSI QESAWKDSETTSQLQQQREEASQQPQQSDDQQGDRDTMAAPIEERLASLKKVMQENNIDV YILINSDEHNSEIINDKDKKILYLSNYSGADGILILTKDKQIMYVNALYELQANKELNHD IFTIRVSRITNRDEIYETIASLEFNNIAVDGKNTSVAFYEKLKSKIESTYPGKTVEEKVI YENDMNQIVRNENINFIILEKSLVEIQNNEVNNKEVFIHDRKFNGACSGQKLEKFRQAFS FDKTNVDKILISELDEIAYILNLRGFDYTFSPLFYAYLYFEFNREKDEFGKMILFTASKN LSASSIRHLNTVNVAVKEYETVVEYLRDNVSSKTMALTKAGKEASEVHTLPSKELTKKES NSQKKYEISLSPYINLMIYMLFNKDKVLLEKSPIVAMKAVKNDVEIDNMKEAHVLDALAL LQFFHWCDEKKKTKELFNETEMSLKNKVDYFRSTKPNYISPSFATISASGPNAAVIHYEV TESTNAKITPSIFLLDSGGQYLHGTTDVTRTTHFGEPTAEEKKIYTLVLKGHLHLRKVIF ASYTNSMALDFIARENLFKHFLDYNHGTGHGVGLFLNVHEGGCSIGPTAGTPLQPYMVLS NEPGYYLENKFGVRIENMQFVISKKKTDNTEFYSFEDLTLYPYEKKLLDFSILTTKDIRD INEYHDTIRKTLLPRLKQNPSEYDEGLVKYLMDITEPIAIN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1260600.fa Sequence name : PcyM_1260600 Sequence length : 821 VALUES OF COMPUTED PARAMETERS Coef20 : 4.679 CoefTot : -7.267 ChDiff : -8 ZoneTo : 117 KR : 12 DE : 1 CleavSite : 93 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.529 1.465 0.096 0.614 MesoH : -0.288 0.207 -0.381 0.248 MuHd_075 : 37.342 29.025 12.927 9.202 MuHd_095 : 39.494 26.693 12.202 9.609 MuHd_100 : 37.388 23.283 11.000 7.488 MuHd_105 : 32.753 28.338 12.002 7.875 Hmax_075 : 12.500 13.100 2.881 5.000 Hmax_095 : 6.600 8.800 0.841 4.330 Hmax_100 : 6.600 15.000 0.841 2.700 Hmax_105 : 15.400 18.550 2.478 6.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0234 0.9766 DFMC : 0.0226 0.9774 This protein is probably imported in mitochondria. f(Ser) = 0.1282 f(Arg) = 0.0513 CMi = 0.90416 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 821 PcyM_1260600 MRVNSLLYALSSLMVFHLNFFYKGNRVNYVSAYINSIHKYTNYGNGSNNVGGNRGGNGSSNRGSNGGNNGGQNNPNNVGR 80 HKIDANGASNRSVTSYFKKKFPQIYQQNGASISSVAGDSIQESAWKDSETTSQLQQQREEASQQPQQSDDQQGDRDTMAA 160 PIEERLASLKKVMQENNIDVYILINSDEHNSEIINDKDKKILYLSNYSGADGILILTKDKQIMYVNALYELQANKELNHD 240 IFTIRVSRITNRDEIYETIASLEFNNIAVDGKNTSVAFYEKLKSKIESTYPGKTVEEKVIYENDMNQIVRNENINFIILE 320 KSLVEIQNNEVNNKEVFIHDRKFNGACSGQKLEKFRQAFSFDKTNVDKILISELDEIAYILNLRGFDYTFSPLFYAYLYF 400 EFNREKDEFGKMILFTASKNLSASSIRHLNTVNVAVKEYETVVEYLRDNVSSKTMALTKAGKEASEVHTLPSKELTKKES 480 NSQKKYEISLSPYINLMIYMLFNKDKVLLEKSPIVAMKAVKNDVEIDNMKEAHVLDALALLQFFHWCDEKKKTKELFNET 560 EMSLKNKVDYFRSTKPNYISPSFATISASGPNAAVIHYEVTESTNAKITPSIFLLDSGGQYLHGTTDVTRTTHFGEPTAE 640 EKKIYTLVLKGHLHLRKVIFASYTNSMALDFIARENLFKHFLDYNHGTGHGVGLFLNVHEGGCSIGPTAGTPLQPYMVLS 720 NEPGYYLENKFGVRIENMQFVISKKKTDNTEFYSFEDLTLYPYEKKLLDFSILTTKDIRDINEYHDTIRKTLLPRLKQNP 800 SEYDEGLVKYLMDITEPIAIN 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ..................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1260600 2 -----MR|VN 0.077 . PcyM_1260600 23 HLNFFYK|GN 0.083 . PcyM_1260600 26 FFYKGNR|VN 0.067 . PcyM_1260600 39 YINSIHK|YT 0.069 . PcyM_1260600 54 NNVGGNR|GG 0.075 . PcyM_1260600 62 GNGSSNR|GS 0.136 . PcyM_1260600 80 NPNNVGR|HK 0.157 . PcyM_1260600 82 NNVGRHK|ID 0.062 . PcyM_1260600 91 ANGASNR|SV 0.255 . PcyM_1260600 98 SVTSYFK|KK 0.061 . PcyM_1260600 99 VTSYFKK|KF 0.132 . PcyM_1260600 100 TSYFKKK|FP 0.152 . PcyM_1260600 126 IQESAWK|DS 0.068 . PcyM_1260600 138 SQLQQQR|EE 0.095 . PcyM_1260600 155 DDQQGDR|DT 0.114 . PcyM_1260600 165 AAPIEER|LA 0.088 . PcyM_1260600 170 ERLASLK|KV 0.081 . PcyM_1260600 171 RLASLKK|VM 0.085 . PcyM_1260600 197 SEIINDK|DK 0.064 . PcyM_1260600 199 IINDKDK|KI 0.063 . PcyM_1260600 200 INDKDKK|IL 0.092 . PcyM_1260600 218 GILILTK|DK 0.065 . PcyM_1260600 220 LILTKDK|QI 0.063 . PcyM_1260600 235 YELQANK|EL 0.061 . PcyM_1260600 245 HDIFTIR|VS 0.080 . PcyM_1260600 248 FTIRVSR|IT 0.194 . PcyM_1260600 252 VSRITNR|DE 0.103 . PcyM_1260600 272 NIAVDGK|NT 0.074 . PcyM_1260600 281 SVAFYEK|LK 0.082 . PcyM_1260600 283 AFYEKLK|SK 0.070 . PcyM_1260600 285 YEKLKSK|IE 0.068 . PcyM_1260600 293 ESTYPGK|TV 0.077 . PcyM_1260600 298 GKTVEEK|VI 0.067 . PcyM_1260600 310 DMNQIVR|NE 0.082 . PcyM_1260600 321 NFIILEK|SL 0.075 . PcyM_1260600 334 NNEVNNK|EV 0.077 . PcyM_1260600 341 EVFIHDR|KF 0.089 . PcyM_1260600 342 VFIHDRK|FN 0.093 . PcyM_1260600 351 GACSGQK|LE 0.052 . PcyM_1260600 354 SGQKLEK|FR 0.064 . PcyM_1260600 356 QKLEKFR|QA 0.120 . PcyM_1260600 363 QAFSFDK|TN 0.060 . PcyM_1260600 368 DKTNVDK|IL 0.070 . PcyM_1260600 384 AYILNLR|GF 0.074 . PcyM_1260600 404 LYFEFNR|EK 0.096 . PcyM_1260600 406 FEFNREK|DE 0.065 . PcyM_1260600 411 EKDEFGK|MI 0.057 . PcyM_1260600 419 ILFTASK|NL 0.061 . PcyM_1260600 427 LSASSIR|HL 0.118 . PcyM_1260600 437 TVNVAVK|EY 0.077 . PcyM_1260600 447 TVVEYLR|DN 0.081 . PcyM_1260600 453 RDNVSSK|TM 0.062 . PcyM_1260600 459 KTMALTK|AG 0.062 . PcyM_1260600 462 ALTKAGK|EA 0.070 . PcyM_1260600 473 VHTLPSK|EL 0.063 . PcyM_1260600 477 PSKELTK|KE 0.061 . PcyM_1260600 478 SKELTKK|ES 0.096 . PcyM_1260600 484 KESNSQK|KY 0.091 . PcyM_1260600 485 ESNSQKK|YE 0.105 . PcyM_1260600 504 IYMLFNK|DK 0.062 . PcyM_1260600 506 MLFNKDK|VL 0.069 . PcyM_1260600 511 DKVLLEK|SP 0.077 . PcyM_1260600 518 SPIVAMK|AV 0.092 . PcyM_1260600 521 VAMKAVK|ND 0.061 . PcyM_1260600 530 VEIDNMK|EA 0.065 . PcyM_1260600 550 FHWCDEK|KK 0.062 . PcyM_1260600 551 HWCDEKK|KT 0.104 . PcyM_1260600 552 WCDEKKK|TK 0.095 . PcyM_1260600 554 DEKKKTK|EL 0.076 . PcyM_1260600 565 ETEMSLK|NK 0.059 . PcyM_1260600 567 EMSLKNK|VD 0.060 . PcyM_1260600 572 NKVDYFR|ST 0.134 . PcyM_1260600 575 DYFRSTK|PN 0.100 . PcyM_1260600 607 TESTNAK|IT 0.076 . PcyM_1260600 630 GTTDVTR|TT 0.117 . PcyM_1260600 642 EPTAEEK|KI 0.061 . PcyM_1260600 643 PTAEEKK|IY 0.094 . PcyM_1260600 650 IYTLVLK|GH 0.056 . PcyM_1260600 656 KGHLHLR|KV 0.117 . PcyM_1260600 657 GHLHLRK|VI 0.087 . PcyM_1260600 674 ALDFIAR|EN 0.069 . PcyM_1260600 679 ARENLFK|HF 0.075 . PcyM_1260600 730 GYYLENK|FG 0.078 . PcyM_1260600 734 ENKFGVR|IE 0.076 . PcyM_1260600 744 MQFVISK|KK 0.065 . PcyM_1260600 745 QFVISKK|KT 0.116 . PcyM_1260600 746 FVISKKK|TD 0.096 . PcyM_1260600 765 TLYPYEK|KL 0.057 . PcyM_1260600 766 LYPYEKK|LL 0.087 . PcyM_1260600 776 FSILTTK|DI 0.076 . PcyM_1260600 779 LTTKDIR|DI 0.105 . PcyM_1260600 789 EYHDTIR|KT 0.069 . PcyM_1260600 790 YHDTIRK|TL 0.067 . PcyM_1260600 795 RKTLLPR|LK 0.066 . PcyM_1260600 797 TLLPRLK|QN 0.061 . PcyM_1260600 809 YDEGLVK|YL 0.069 . ____________________________^_________________

  • Fasta :-

    >PcyM_1260600 ATGCGTGTGAATTCCCTTCTCTACGCGCTTTCTTCTTTAATGGTATTCCATTTAAACTTC TTTTACAAAGGGAATAGGGTTAACTACGTTTCTGCGTACATCAATTCGATACACAAGTAC ACCAATTACGGCAACGGAAGTAACAACGTAGGTGGCAACCGAGGAGGCAACGGAAGCAGC AACCGAGGAAGCAACGGAGGCAACAACGGAGGCCAGAACAACCCAAATAACGTCGGGAGG CACAAAATAGACGCGAACGGAGCATCGAATAGGTCAGTCACCTCGTACTTCAAAAAAAAG TTCCCTCAGATTTATCAGCAGAACGGCGCAAGCATCTCCAGCGTAGCGGGAGATTCCATC CAGGAAAGCGCGTGGAAGGACTCAGAAACGACCTCGCAACTGCAGCAACAGAGAGAGGAG GCCTCGCAGCAACCACAACAGAGTGACGATCAACAAGGAGATAGAGACACCATGGCAGCT CCCATCGAAGAGAGACTCGCAAGCCTGAAGAAAGTAATGCAGGAAAATAACATAGATGTG TACATCCTAATAAACAGCGACGAACACAACTCAGAAATTATAAACGACAAGGACAAAAAA ATACTTTATTTGAGCAACTACAGTGGAGCCGACGGTATCTTAATACTTACCAAGGACAAG CAAATTATGTACGTGAATGCACTGTACGAATTACAAGCGAACAAAGAATTAAACCACGAT ATTTTTACCATCCGAGTTAGCAGAATTACCAACCGAGATGAAATATACGAAACAATTGCA TCTCTTGAATTTAACAATATTGCAGTCGATGGAAAAAACACCAGCGTCGCTTTCTATGAA AAATTAAAGAGTAAAATAGAGTCTACTTATCCAGGCAAAACAGTGGAAGAAAAAGTGATT TACGAAAATGACATGAATCAAATTGTAAGAAATGAAAATATCAACTTCATCATTTTAGAA AAGTCCCTAGTAGAAATACAAAACAATGAAGTGAATAATAAGGAGGTGTTTATACATGAC AGAAAATTTAACGGTGCATGTTCAGGACAGAAATTAGAAAAATTCAGACAAGCATTTTCC TTTGATAAAACAAATGTGGATAAGATATTAATCTCAGAGTTAGACGAAATTGCTTATATT TTAAACCTACGTGGATTTGATTACACCTTTTCTCCTCTATTCTATGCGTACCTCTACTTT GAGTTCAATAGGGAAAAGGACGAATTTGGAAAAATGATTCTATTCACTGCATCGAAGAAC CTCTCCGCGAGTTCCATCAGACACCTCAACACAGTTAACGTGGCTGTCAAGGAGTATGAA ACGGTAGTCGAATATCTAAGGGACAACGTCTCGTCCAAAACGATGGCACTCACCAAGGCA GGCAAAGAAGCAAGCGAAGTTCATACACTCCCCTCCAAGGAACTCACCAAAAAAGAATCC AATTCGCAGAAAAAATACGAAATTTCTCTCAGCCCATATATTAACCTAATGATCTACATG CTTTTTAATAAGGACAAAGTATTGCTAGAAAAATCTCCCATTGTTGCCATGAAGGCAGTT AAAAACGACGTCGAAATAGATAACATGAAAGAAGCACATGTGCTAGATGCATTGGCACTT TTACAATTCTTTCACTGGTGTGATGAAAAGAAAAAAACCAAAGAGTTATTTAACGAAACG GAAATGTCTTTAAAAAATAAAGTAGATTACTTCAGATCCACCAAACCAAATTACATCTCC CCCTCCTTTGCAACGATCTCGGCAAGTGGACCAAATGCTGCAGTCATTCACTACGAAGTT ACTGAATCAACAAATGCGAAGATCACGCCAAGTATATTTCTCCTTGATTCGGGAGGACAA TACTTACACGGAACCACAGATGTAACTAGAACGACGCACTTTGGAGAACCCACAGCGGAA GAAAAGAAAATATACACCCTAGTACTTAAAGGTCACCTACATTTAAGAAAAGTTATATTT GCCAGCTACACGAATTCTATGGCCCTAGATTTTATTGCACGTGAAAATTTATTCAAACAC TTCCTCGATTATAATCACGGAACTGGACATGGAGTAGGGTTATTCTTAAACGTCCATGAA GGTGGTTGCTCCATCGGACCAACAGCTGGCACTCCACTGCAACCATATATGGTACTTTCA AACGAACCCGGATATTACCTCGAAAATAAATTTGGTGTCAGAATCGAAAACATGCAATTT GTAATTAGCAAGAAGAAAACAGACAACACAGAATTCTACTCCTTCGAAGATTTAACTCTC TATCCGTATGAAAAAAAACTACTCGATTTTTCTATACTGACAACTAAAGACATTAGAGAC ATCAATGAATACCACGACACTATTAGGAAAACCCTCCTCCCCAGGCTGAAGCAGAACCCC TCCGAATACGACGAGGGACTAGTGAAGTACCTCATGGATATCACCGAGCCGATTGCGATC AACTAG
  • Download Fasta

  • Fasta :-

    MRVNSLLYALSSLMVFHLNFFYKGNRVNYVSAYINSIHKYTNYGNGSNNVGGNRGGNGSS NRGSNGGNNGGQNNPNNVGRHKIDANGASNRSVTSYFKKKFPQIYQQNGASISSVAGDSI QESAWKDSETTSQLQQQREEASQQPQQSDDQQGDRDTMAAPIEERLASLKKVMQENNIDV YILINSDEHNSEIINDKDKKILYLSNYSGADGILILTKDKQIMYVNALYELQANKELNHD IFTIRVSRITNRDEIYETIASLEFNNIAVDGKNTSVAFYEKLKSKIESTYPGKTVEEKVI YENDMNQIVRNENINFIILEKSLVEIQNNEVNNKEVFIHDRKFNGACSGQKLEKFRQAFS FDKTNVDKILISELDEIAYILNLRGFDYTFSPLFYAYLYFEFNREKDEFGKMILFTASKN LSASSIRHLNTVNVAVKEYETVVEYLRDNVSSKTMALTKAGKEASEVHTLPSKELTKKES NSQKKYEISLSPYINLMIYMLFNKDKVLLEKSPIVAMKAVKNDVEIDNMKEAHVLDALAL LQFFHWCDEKKKTKELFNETEMSLKNKVDYFRSTKPNYISPSFATISASGPNAAVIHYEV TESTNAKITPSIFLLDSGGQYLHGTTDVTRTTHFGEPTAEEKKIYTLVLKGHLHLRKVIF ASYTNSMALDFIARENLFKHFLDYNHGTGHGVGLFLNVHEGGCSIGPTAGTPLQPYMVLS NEPGYYLENKFGVRIENMQFVISKKKTDNTEFYSFEDLTLYPYEKKLLDFSILTTKDIRD INEYHDTIRKTLLPRLKQNPSEYDEGLVKYLMDITEPIAIN

  • title: active site
  • coordinates: H597,D616,D627,L694,E722,E736
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1260600743 SQFVISKKKT0.994unspPcyM_1260600743 SQFVISKKKT0.994unspPcyM_1260600743 SQFVISKKKT0.994unspPcyM_1260600284 SEKLKSKIES0.992unspPcyM_1260600482 SKESNSQKKY0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India