PcyM_1274200 | metalloprotease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PcyM_1274200OTHER0.9999950.0000020.000003
No Results

  • Fasta :-

    >PcyM_1274200 MEEVRKRVERGKEKIKQIGKEIHQFDLTKTVENFFFKNGKEKKLSDMLFLVQYSLKYKNV CKWPNYNDLFVINYNINDHFKSMIQKNGGFVHHYKNITPDEGTDSTPTMNRGGETTLRSS DKSDTTNHNAEENAPQIAEKQIDANSENGVASKTNKPRSSADREDQIYPDGTRLTKGELP QNFPSEKYSPNNFASDNTVPESSPSKEFTPQSAPPPNSAHRKKENKFVTHFNDDISPYDK IKLQIFMYFVLNNYRVKILVDALSALNRPINVIYINCPNNKEQKKTFFQKLGSFFTPQYK VGDVFVNNKNNYLPKSKENCSCSELSPIRYNSNNPTTAPSKEKKSNYVGGYNPINNTIWL CSNNINNYYKLKYILTHELIHAFDFARANIDMYNCHHIACSEIRAYNLSNQCSYFNSKSF SPDHDVFTYFKSPSIRATPKNKCIYNNVYSSLNQYKPCTNNTHQFINHVFEKCLHDYWPF MCSPEQDSKYKPSKIFKKDS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1274200.fa Sequence name : PcyM_1274200 Sequence length : 500 VALUES OF COMPUTED PARAMETERS Coef20 : 3.423 CoefTot : 0.000 ChDiff : 16 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.088 1.071 -0.171 0.368 MesoH : -1.074 -0.011 -0.553 0.101 MuHd_075 : 14.295 13.601 5.616 4.464 MuHd_095 : 42.388 27.048 12.760 8.205 MuHd_100 : 52.101 34.132 15.435 10.220 MuHd_105 : 50.992 33.273 14.809 10.079 Hmax_075 : -19.717 2.333 -6.378 0.723 Hmax_095 : -4.900 9.000 -1.647 2.240 Hmax_100 : 7.000 15.000 0.931 4.620 Hmax_105 : -4.638 9.187 -1.807 1.855 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8339 0.1661 DFMC : 0.9309 0.0691
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 500 PcyM_1274200 MEEVRKRVERGKEKIKQIGKEIHQFDLTKTVENFFFKNGKEKKLSDMLFLVQYSLKYKNVCKWPNYNDLFVINYNINDHF 80 KSMIQKNGGFVHHYKNITPDEGTDSTPTMNRGGETTLRSSDKSDTTNHNAEENAPQIAEKQIDANSENGVASKTNKPRSS 160 ADREDQIYPDGTRLTKGELPQNFPSEKYSPNNFASDNTVPESSPSKEFTPQSAPPPNSAHRKKENKFVTHFNDDISPYDK 240 IKLQIFMYFVLNNYRVKILVDALSALNRPINVIYINCPNNKEQKKTFFQKLGSFFTPQYKVGDVFVNNKNNYLPKSKENC 320 SCSELSPIRYNSNNPTTAPSKEKKSNYVGGYNPINNTIWLCSNNINNYYKLKYILTHELIHAFDFARANIDMYNCHHIAC 400 SEIRAYNLSNQCSYFNSKSFSPDHDVFTYFKSPSIRATPKNKCIYNNVYSSLNQYKPCTNNTHQFINHVFEKCLHDYWPF 480 MCSPEQDSKYKPSKIFKKDS 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1274200 5 --MEEVR|KR 0.069 . PcyM_1274200 6 -MEEVRK|RV 0.101 . PcyM_1274200 7 MEEVRKR|VE 0.187 . PcyM_1274200 10 VRKRVER|GK 0.480 . PcyM_1274200 12 KRVERGK|EK 0.079 . PcyM_1274200 14 VERGKEK|IK 0.066 . PcyM_1274200 16 RGKEKIK|QI 0.109 . PcyM_1274200 20 KIKQIGK|EI 0.067 . PcyM_1274200 29 HQFDLTK|TV 0.076 . PcyM_1274200 37 VENFFFK|NG 0.062 . PcyM_1274200 40 FFFKNGK|EK 0.058 . PcyM_1274200 42 FKNGKEK|KL 0.095 . PcyM_1274200 43 KNGKEKK|LS 0.117 . PcyM_1274200 56 LVQYSLK|YK 0.063 . PcyM_1274200 58 QYSLKYK|NV 0.088 . PcyM_1274200 62 KYKNVCK|WP 0.061 . PcyM_1274200 81 NINDHFK|SM 0.110 . PcyM_1274200 86 FKSMIQK|NG 0.077 . PcyM_1274200 95 GFVHHYK|NI 0.084 . PcyM_1274200 111 STPTMNR|GG 0.100 . PcyM_1274200 118 GGETTLR|SS 0.150 . PcyM_1274200 122 TLRSSDK|SD 0.105 . PcyM_1274200 140 APQIAEK|QI 0.081 . PcyM_1274200 153 ENGVASK|TN 0.059 . PcyM_1274200 156 VASKTNK|PR 0.071 . PcyM_1274200 158 SKTNKPR|SS 0.233 . PcyM_1274200 163 PRSSADR|ED 0.117 . PcyM_1274200 173 IYPDGTR|LT 0.079 . PcyM_1274200 176 DGTRLTK|GE 0.090 . PcyM_1274200 187 QNFPSEK|YS 0.065 . PcyM_1274200 206 PESSPSK|EF 0.065 . PcyM_1274200 221 PPNSAHR|KK 0.129 . PcyM_1274200 222 PNSAHRK|KE 0.126 . PcyM_1274200 223 NSAHRKK|EN 0.142 . PcyM_1274200 226 HRKKENK|FV 0.112 . PcyM_1274200 240 DISPYDK|IK 0.075 . PcyM_1274200 242 SPYDKIK|LQ 0.066 . PcyM_1274200 255 FVLNNYR|VK 0.062 . PcyM_1274200 257 LNNYRVK|IL 0.077 . PcyM_1274200 268 ALSALNR|PI 0.107 . PcyM_1274200 281 INCPNNK|EQ 0.065 . PcyM_1274200 284 PNNKEQK|KT 0.073 . PcyM_1274200 285 NNKEQKK|TF 0.152 . PcyM_1274200 290 KKTFFQK|LG 0.070 . PcyM_1274200 300 FFTPQYK|VG 0.056 . PcyM_1274200 309 DVFVNNK|NN 0.053 . PcyM_1274200 315 KNNYLPK|SK 0.101 . PcyM_1274200 317 NYLPKSK|EN 0.058 . PcyM_1274200 329 SELSPIR|YN 0.100 . PcyM_1274200 341 PTTAPSK|EK 0.056 . PcyM_1274200 343 TAPSKEK|KS 0.069 . PcyM_1274200 344 APSKEKK|SN 0.323 . PcyM_1274200 370 NINNYYK|LK 0.066 . PcyM_1274200 372 NNYYKLK|YI 0.081 . PcyM_1274200 387 HAFDFAR|AN 0.110 . PcyM_1274200 404 IACSEIR|AY 0.092 . PcyM_1274200 418 CSYFNSK|SF 0.088 . PcyM_1274200 431 DVFTYFK|SP 0.064 . PcyM_1274200 436 FKSPSIR|AT 0.121 . PcyM_1274200 440 SIRATPK|NK 0.070 . PcyM_1274200 442 RATPKNK|CI 0.070 . PcyM_1274200 456 SSLNQYK|PC 0.076 . PcyM_1274200 472 INHVFEK|CL 0.094 . PcyM_1274200 489 SPEQDSK|YK 0.062 . PcyM_1274200 491 EQDSKYK|PS 0.064 . PcyM_1274200 494 SKYKPSK|IF 0.065 . PcyM_1274200 497 KPSKIFK|KD 0.084 . PcyM_1274200 498 PSKIFKK|DS 0.159 . ____________________________^_________________

  • Fasta :-

    >PcyM_1274200 ATGGAAGAAGTACGCAAGAGGGTGGAACGAGGAAAGGAAAAAATTAAACAAATTGGTAAA GAAATTCACCAATTTGATTTGACAAAGACTGTAGAAAATTTTTTTTTTAAAAATGGAAAA GAAAAGAAACTCAGTGACATGTTATTTTTGGTACAATACTCACTGAAATATAAAAACGTG TGTAAATGGCCGAATTATAATGATCTGTTTGTAATAAATTATAACATAAATGATCATTTC AAATCAATGATTCAAAAAAATGGGGGATTTGTTCACCACTATAAAAACATCACACCTGAT GAAGGGACAGATAGCACCCCCACGATGAACCGAGGCGGGGAAACCACACTCAGGAGTAGC GATAAAAGCGACACAACGAATCACAACGCTGAAGAAAACGCTCCCCAGATTGCTGAGAAG CAAATAGACGCTAACTCGGAGAATGGCGTGGCGAGCAAGACTAACAAACCACGGAGTAGC GCAGACAGGGAAGACCAAATATACCCTGACGGAACGCGCTTAACAAAAGGGGAACTGCCA CAGAACTTCCCTTCAGAGAAGTACTCCCCGAATAACTTCGCTTCAGATAACACCGTGCCA GAATCCTCCCCTTCGAAGGAATTCACCCCGCAGAGCGCTCCCCCTCCAAACAGCGCACAC AGAAAAAAGGAAAACAAATTTGTGACCCACTTTAATGACGACATAAGTCCTTACGACAAA ATAAAGTTGCAAATTTTTATGTACTTCGTGTTGAACAATTATAGAGTTAAAATTTTAGTT GATGCATTATCTGCCTTAAATCGCCCAATTAACGTTATATACATAAATTGCCCTAATAAT AAAGAGCAGAAAAAGACATTTTTTCAAAAATTGGGAAGCTTCTTTACACCCCAGTACAAA GTCGGTGATGTTTTCGTGAATAATAAAAATAATTATTTACCGAAGAGCAAGGAAAATTGC TCATGCTCGGAATTGTCTCCCATTAGGTATAATAGTAATAACCCAACCACTGCTCCTTCC AAGGAAAAAAAATCAAATTACGTAGGTGGTTACAACCCTATAAATAACACCATTTGGCTT TGTTCAAATAATATTAACAATTATTATAAGCTCAAATATATACTAACACATGAACTTATA CATGCCTTTGATTTTGCAAGGGCAAATATAGACATGTACAATTGCCACCATATTGCTTGT TCCGAAATAAGAGCCTATAATTTGAGTAATCAGTGCAGCTATTTTAACAGCAAATCTTTT TCCCCCGACCATGATGTATTTACTTATTTTAAAAGTCCCTCAATTAGGGCTACCCCCAAA AATAAATGCATATATAATAATGTGTATTCATCTCTGAACCAGTACAAGCCTTGCACTAAC AACACCCATCAGTTTATAAATCATGTCTTCGAGAAATGCCTGCACGATTACTGGCCCTTC ATGTGTTCGCCCGAACAGGACAGCAAGTATAAGCCTTCCAAAATTTTTAAGAAGGATTCC TAA
  • Download Fasta

  • Fasta :-

    MEEVRKRVERGKEKIKQIGKEIHQFDLTKTVENFFFKNGKEKKLSDMLFLVQYSLKYKNV CKWPNYNDLFVINYNINDHFKSMIQKNGGFVHHYKNITPDEGTDSTPTMNRGGETTLRSS DKSDTTNHNAEENAPQIAEKQIDANSENGVASKTNKPRSSADREDQIYPDGTRLTKGELP QNFPSEKYSPNNFASDNTVPESSPSKEFTPQSAPPPNSAHRKKENKFVTHFNDDISPYDK IKLQIFMYFVLNNYRVKILVDALSALNRPINVIYINCPNNKEQKKTFFQKLGSFFTPQYK VGDVFVNNKNNYLPKSKENCSCSELSPIRYNSNNPTTAPSKEKKSNYVGGYNPINNTIWL CSNNINNYYKLKYILTHELIHAFDFARANIDMYNCHHIACSEIRAYNLSNQCSYFNSKSF SPDHDVFTYFKSPSIRATPKNKCIYNNVYSSLNQYKPCTNNTHQFINHVFEKCLHDYWPF MCSPEQDSKYKPSKIFKKDS

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1274200160 SKPRSSADRE0.995unspPcyM_1274200160 SKPRSSADRE0.995unspPcyM_1274200160 SKPRSSADRE0.995unspPcyM_1274200203 SVPESSPSKE0.993unspPcyM_1274200205 SESSPSKEFT0.996unspPcyM_1274200236 SNDDISPYDK0.997unspPcyM_1274200120 STLRSSDKSD0.998unspPcyM_1274200159 SNKPRSSADR0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India