PcyM_1281000 | lysophospholipase, putative

UniProt_ID:

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs:
Computed_GO_Functions:
Computed_GO_Process_IDs:
Computed_GO_Processes:
Curated_GO_Component_IDs:
Curated_GO_Components:
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Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PcyM_1281000	OTHER	0.999798	0.000096	0.000106

No Results

Fasta :-
>PcyM_1281000 MIRRDSYSTVENRKRTQFDETSTQFDDASSQFDDASSQYDETPKQLDGTPTLDSFYNKDG LLLRTYGWLVKNAIGIIILIHGLNSHVRFSFLRHNVDIVGNEKAILKDENNYYVYKDSWI EHFNKCGYSVYGIDLQGHGQSDGWGNLKVNVKEYDDLVYDVMQYIHEIHDKVGSYGDKCG DSSSSGDERCEEVPSTSNKNRGTLLCVKETDEESEPSGKKKGKSSKSSKSDKSSSGKTKD KSSNSNKSDKSSNSKKIFKWFSRKKSDKSSSSKMNDGSCSKINDGSSSKMSDGSSSKPSD GSNSQISDKSASKRKSSKLLSIGDAGSEMLFKKKKKKKKALPTYIIGQSMGGNIALRTLQ ILGKSNDERNKRLNIKGCISLSGMISIELMVASPRSYKYSCFYLPFFKLFSCFFPRYRLI NNMHYIRYKYMNDVARFDKIRYKKGITSRFGYELLKAMKILDRDMIYIPKDIPILFIHSK DDTLCYYRGVVSFFNRLKNDNKELHILENMEHMLTIEPGNENVLKKILTWLTNLPNAIRD TKWNFEERGL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1281000.fa Sequence name : PcyM_1281000 Sequence length : 550 VALUES OF COMPUTED PARAMETERS Coef20 : 4.190 CoefTot : 0.270 ChDiff : 23 ZoneTo : 4 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.418 1.600 0.272 0.682 MesoH : -0.651 0.212 -0.359 0.159 MuHd_075 : 21.570 9.790 4.555 5.450 MuHd_095 : 20.518 12.209 4.296 4.384 MuHd_100 : 19.315 7.640 4.946 2.857 MuHd_105 : 16.734 6.203 5.158 2.629 Hmax_075 : -8.312 -6.038 -5.009 -0.263 Hmax_095 : -12.250 -1.663 -4.585 -0.840 Hmax_100 : -4.500 -1.500 -3.156 0.080 Hmax_105 : -9.217 -2.500 -4.091 -0.653 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6386 0.3614 DFMC : 0.7662 0.2338

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 550 PcyM_1281000 MIRRDSYSTVENRKRTQFDETSTQFDDASSQFDDASSQYDETPKQLDGTPTLDSFYNKDGLLLRTYGWLVKNAIGIIILI 80 HGLNSHVRFSFLRHNVDIVGNEKAILKDENNYYVYKDSWIEHFNKCGYSVYGIDLQGHGQSDGWGNLKVNVKEYDDLVYD 160 VMQYIHEIHDKVGSYGDKCGDSSSSGDERCEEVPSTSNKNRGTLLCVKETDEESEPSGKKKGKSSKSSKSDKSSSGKTKD 240 KSSNSNKSDKSSNSKKIFKWFSRKKSDKSSSSKMNDGSCSKINDGSSSKMSDGSSSKPSDGSNSQISDKSASKRKSSKLL 320 SIGDAGSEMLFKKKKKKKKALPTYIIGQSMGGNIALRTLQILGKSNDERNKRLNIKGCISLSGMISIELMVASPRSYKYS 400 CFYLPFFKLFSCFFPRYRLINNMHYIRYKYMNDVARFDKIRYKKGITSRFGYELLKAMKILDRDMIYIPKDIPILFIHSK 480 DDTLCYYRGVVSFFNRLKNDNKELHILENMEHMLTIEPGNENVLKKILTWLTNLPNAIRDTKWNFEERGL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1281000 3 ----MIR|RD 0.079 . PcyM_1281000 4 ---MIRR|DS 0.148 . PcyM_1281000 13 YSTVENR|KR 0.080 . PcyM_1281000 14 STVENRK|RT 0.076 . PcyM_1281000 15 TVENRKR|TQ 0.197 . PcyM_1281000 44 QYDETPK|QL 0.062 . PcyM_1281000 58 LDSFYNK|DG 0.069 . PcyM_1281000 64 KDGLLLR|TY 0.090 . PcyM_1281000 71 TYGWLVK|NA 0.068 . PcyM_1281000 88 GLNSHVR|FS 0.099 . PcyM_1281000 93 VRFSFLR|HN 0.105 . PcyM_1281000 103 DIVGNEK|AI 0.060 . PcyM_1281000 107 NEKAILK|DE 0.059 . PcyM_1281000 116 NNYYVYK|DS 0.081 . PcyM_1281000 125 WIEHFNK|CG 0.062 . PcyM_1281000 148 DGWGNLK|VN 0.056 . PcyM_1281000 152 NLKVNVK|EY 0.067 . PcyM_1281000 171 IHEIHDK|VG 0.071 . PcyM_1281000 178 VGSYGDK|CG 0.064 . PcyM_1281000 189 SSSGDER|CE 0.091 . PcyM_1281000 199 VPSTSNK|NR 0.088 . PcyM_1281000 201 STSNKNR|GT 0.138 . PcyM_1281000 208 GTLLCVK|ET 0.057 . PcyM_1281000 219 ESEPSGK|KK 0.071 . PcyM_1281000 220 SEPSGKK|KG 0.071 . PcyM_1281000 221 EPSGKKK|GK 0.188 . PcyM_1281000 223 SGKKKGK|SS 0.104 . PcyM_1281000 226 KKGKSSK|SS 0.089 . PcyM_1281000 229 KSSKSSK|SD 0.101 . PcyM_1281000 232 KSSKSDK|SS 0.190 . PcyM_1281000 237 DKSSSGK|TK 0.080 . PcyM_1281000 239 SSSGKTK|DK 0.102 . PcyM_1281000 241 SGKTKDK|SS 0.082 . PcyM_1281000 247 KSSNSNK|SD 0.100 . PcyM_1281000 250 NSNKSDK|SS 0.096 . PcyM_1281000 255 DKSSNSK|KI 0.072 . PcyM_1281000 256 KSSNSKK|IF 0.122 . PcyM_1281000 259 NSKKIFK|WF 0.072 . PcyM_1281000 263 IFKWFSR|KK 0.100 . PcyM_1281000 264 FKWFSRK|KS 0.102 . PcyM_1281000 265 KWFSRKK|SD 0.118 . PcyM_1281000 268 SRKKSDK|SS 0.142 . PcyM_1281000 273 DKSSSSK|MN 0.078 . PcyM_1281000 281 NDGSCSK|IN 0.058 . PcyM_1281000 289 NDGSSSK|MS 0.065 . PcyM_1281000 297 SDGSSSK|PS 0.071 . PcyM_1281000 309 NSQISDK|SA 0.115 . PcyM_1281000 313 SDKSASK|RK 0.064 . PcyM_1281000 314 DKSASKR|KS 0.357 . PcyM_1281000 315 KSASKRK|SS 0.115 . PcyM_1281000 318 SKRKSSK|LL 0.091 . PcyM_1281000 332 GSEMLFK|KK 0.064 . PcyM_1281000 333 SEMLFKK|KK 0.106 . PcyM_1281000 334 EMLFKKK|KK 0.082 . PcyM_1281000 335 MLFKKKK|KK 0.156 . PcyM_1281000 336 LFKKKKK|KK 0.111 . PcyM_1281000 337 FKKKKKK|KK 0.087 . PcyM_1281000 338 KKKKKKK|KA 0.141 . PcyM_1281000 339 KKKKKKK|AL 0.169 . PcyM_1281000 357 GGNIALR|TL 0.091 . PcyM_1281000 364 TLQILGK|SN 0.084 . PcyM_1281000 369 GKSNDER|NK 0.102 . PcyM_1281000 371 SNDERNK|RL 0.065 . PcyM_1281000 372 NDERNKR|LN 0.484 . PcyM_1281000 376 NKRLNIK|GC 0.068 . PcyM_1281000 395 LMVASPR|SY 0.118 . PcyM_1281000 398 ASPRSYK|YS 0.192 . PcyM_1281000 408 FYLPFFK|LF 0.056 . PcyM_1281000 416 FSCFFPR|YR 0.091 . PcyM_1281000 418 CFFPRYR|LI 0.073 . PcyM_1281000 427 NNMHYIR|YK 0.085 . PcyM_1281000 429 MHYIRYK|YM 0.073 . PcyM_1281000 436 YMNDVAR|FD 0.104 . PcyM_1281000 439 DVARFDK|IR 0.131 . PcyM_1281000 441 ARFDKIR|YK 0.122 . PcyM_1281000 443 FDKIRYK|KG 0.066 . PcyM_1281000 444 DKIRYKK|GI 0.333 . PcyM_1281000 449 KKGITSR|FG 0.111 . PcyM_1281000 456 FGYELLK|AM 0.057 . PcyM_1281000 459 ELLKAMK|IL 0.061 . PcyM_1281000 463 AMKILDR|DM 0.098 . PcyM_1281000 470 DMIYIPK|DI 0.069 . PcyM_1281000 480 ILFIHSK|DD 0.065 . PcyM_1281000 488 DTLCYYR|GV 0.083 . PcyM_1281000 496 VVSFFNR|LK 0.093 . PcyM_1281000 498 SFFNRLK|ND 0.068 . PcyM_1281000 502 RLKNDNK|EL 0.073 . PcyM_1281000 525 GNENVLK|KI 0.076 . PcyM_1281000 526 NENVLKK|IL 0.121 . PcyM_1281000 539 NLPNAIR|DT 0.091 . PcyM_1281000 542 NAIRDTK|WN 0.119 . PcyM_1281000 548 KWNFEER|GL 0.120 . ____________________________^_________________

Fasta :-
>PcyM_1281000 ATGATAAGGCGCGATTCATATAGCACTGTAGAAAATAGAAAGAGAACGCAGTTTGATGAA ACATCTACACAGTTTGATGATGCATCTTCGCAGTTTGATGACGCATCTTCGCAGTATGAT GAAACGCCCAAGCAGCTAGATGGAACACCCACGCTTGATTCTTTTTATAATAAGGATGGC TTATTATTGAGAACATATGGGTGGTTAGTAAAAAATGCTATAGGTATTATAATACTAATA CACGGTTTAAATTCGCACGTTAGGTTTTCATTTTTAAGACATAACGTAGATATAGTGGGT AACGAGAAGGCCATATTGAAAGACGAAAATAATTATTACGTTTACAAGGATAGTTGGATA GAACACTTTAACAAATGTGGATATTCAGTCTATGGCATAGATTTGCAGGGTCATGGACAA TCTGATGGATGGGGGAATTTAAAGGTTAATGTAAAAGAGTATGACGATTTGGTGTATGAC GTGATGCAATACATTCATGAAATTCATGACAAAGTGGGTTCATATGGTGATAAATGTGGA GATTCATCATCATCTGGTGATGAAAGGTGTGAAGAAGTACCCTCAACTAGTAACAAAAAC CGTGGTACATTGTTATGTGTCAAAGAAACAGATGAAGAATCGGAACCTAGTGGCAAAAAA AAAGGCAAATCGTCAAAAAGCAGCAAGAGTGATAAATCGTCAAGCGGCAAAACAAAAGAC AAATCGTCAAATAGCAATAAGAGCGATAAATCGTCAAACAGCAAAAAAATTTTTAAATGG TTTAGTAGGAAAAAGAGCGATAAATCCTCCAGTAGCAAAATGAATGACGGTTCTTGTAGC AAAATTAATGATGGTTCTAGTAGCAAAATGAGTGATGGTTCTAGTAGCAAACCGAGTGAT GGATCTAATAGCCAAATAAGTGATAAATCGGCCAGTAAAAGAAAAAGTAGTAAGTTACTA TCCATTGGCGATGCAGGGAGTGAAATGTTATTTAAAAAAAAAAAAAAAAAAAAAAAAGCC CTCCCCACTTATATTATTGGACAATCGATGGGAGGAAATATTGCTTTAAGGACTTTACAA ATACTGGGAAAATCGAATGATGAAAGAAATAAGAGATTAAATATTAAGGGGTGTATATCA TTGTCCGGGATGATTTCTATTGAACTAATGGTAGCGTCTCCGCGTTCCTATAAATATAGT TGCTTCTATTTGCCATTTTTCAAGTTGTTTTCCTGTTTTTTCCCAAGATATCGGCTTATA AATAATATGCACTACATAAGGTATAAATATATGAATGATGTGGCTCGTTTCGATAAGATT CGTTATAAGAAAGGAATAACAAGTAGATTTGGATATGAACTATTAAAAGCAATGAAAATT TTAGACAGAGATATGATTTATATTCCTAAGGATATTCCCATTTTGTTTATCCATTCGAAG GATGATACTTTATGTTATTATAGAGGAGTTGTATCATTTTTTAACAGGCTAAAGAATGAT AATAAGGAGCTGCACATTTTAGAAAACATGGAACACATGTTGACCATTGAGCCTGGAAAT GAAAACGTTTTAAAAAAGATTTTGACTTGGCTCACCAATTTGCCGAACGCAATAAGGGAC ACGAAATGGAATTTTGAGGAAAGGGGTTTATAA
Download Fasta

Fasta :-

MIRRDSYSTVENRKRTQFDETSTQFDDASSQFDDASSQYDETPKQLDGTPTLDSFYNKDG LLLRTYGWLVKNAIGIIILIHGLNSHVRFSFLRHNVDIVGNEKAILKDENNYYVYKDSWI EHFNKCGYSVYGIDLQGHGQSDGWGNLKVNVKEYDDLVYDVMQYIHEIHDKVGSYGDKCG DSSSSGDERCEEVPSTSNKNRGTLLCVKETDEESEPSGKKKGKSSKSSKSDKSSSGKTKD KSSNSNKSDKSSNSKKIFKWFSRKKSDKSSSSKMNDGSCSKINDGSSSKMSDGSSSKPSD GSNSQISDKSASKRKSSKLLSIGDAGSEMLFKKKKKKKKALPTYIIGQSMGGNIALRTLQ ILGKSNDERNKRLNIKGCISLSGMISIELMVASPRSYKYSCFYLPFFKLFSCFFPRYRLI NNMHYIRYKYMNDVARFDKIRYKKGITSRFGYELLKAMKILDRDMIYIPKDIPILFIHSK DDTLCYYRGVVSFFNRLKNDNKELHILENMEHMLTIEPGNENVLKKILTWLTNLPNAIRD TKWNFEERGL

SCOPe

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PcyM_1281000	30 S	DDASSQFDD	0.994	unsp	PcyM_1281000	30 S	DDASSQFDD	0.994	unsp	PcyM_1281000	30 S	DDASSQFDD	0.994	unsp	PcyM_1281000	37 S	DDASSQYDE	0.997	unsp	PcyM_1281000	185 S	DSSSSGDER	0.991	unsp	PcyM_1281000	224 S	KKGKSSKSS	0.997	unsp	PcyM_1281000	227 S	KSSKSSKSD	0.997	unsp	PcyM_1281000	228 S	SSKSSKSDK	0.997	unsp	PcyM_1281000	230 S	KSSKSDKSS	0.997	unsp	PcyM_1281000	234 S	SDKSSSGKT	0.992	unsp	PcyM_1281000	235 S	DKSSSGKTK	0.995	unsp	PcyM_1281000	245 S	KSSNSNKSD	0.995	unsp	PcyM_1281000	248 S	NSNKSDKSS	0.994	unsp	PcyM_1281000	266 S	SRKKSDKSS	0.997	unsp	PcyM_1281000	271 S	DKSSSSKMN	0.997	unsp	PcyM_1281000	287 S	NDGSSSKMS	0.997	unsp	PcyM_1281000	291 S	SSKMSDGSS	0.99	unsp	PcyM_1281000	295 S	SDGSSSKPS	0.996	unsp	PcyM_1281000	307 S	NSQISDKSA	0.995	unsp	PcyM_1281000	312 S	DKSASKRKS	0.993	unsp	PcyM_1281000	316 S	SKRKSSKLL	0.997	unsp	PcyM_1281000	321 S	SKLLSIGDA	0.995	unsp	PcyM_1281000	479 S	LFIHSKDDT	0.991	unsp	PcyM_1281000	6 S	IRRDSYSTV	0.996	unsp	PcyM_1281000	8 S	RDSYSTVEN	0.995	unsp

PcyM_1281000 | lysophospholipase, putative

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs:

Computed_GO_Functions:

Computed_GO_Process_IDs:

Computed_GO_Processes:

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

SCOPe

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India