PcyM_1301900 | SRAP domain-containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_1301900OTHER0.9999370.0000040.000059
No Results

  • Fasta :-

    >PcyM_1301900 MCVRVYYNIDINVLKKKYNCEQILNNEKLRRGMINKKNYMPIIYESAENGKENKAPQKIK VIQVCLWGLKPYNYGKLGKEILLINAREESLQSKKSFNVLINKNRCAVVVNGYFEWMYIK GSSKRIPYFVFFGKDDDSSDEITEGKLETNIEKLAVEKTEEKSEEKIIPRIKENRVTIRI RVKKEIESDENKKGEIKKEEKEEEEVKEEEEEESPSNEEESAIVDRGAPKRKKEGKEKSN KKKIKTELPSEADLEEDDEEEKSHVIIAGLYSISKTDKKDCRYTIITTACENATLRDIND RCPLLLSENTLNLWLDVEKKYEDIIESIKEEHQVVLNTLKYREVKSWTDYATKSKRAKKA AKVAIAKQAKK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1301900.fa Sequence name : PcyM_1301900 Sequence length : 371 VALUES OF COMPUTED PARAMETERS Coef20 : 3.893 CoefTot : -0.313 ChDiff : 4 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.171 0.594 -0.182 0.385 MesoH : -1.268 -0.018 -0.590 0.092 MuHd_075 : 3.727 8.726 2.047 1.600 MuHd_095 : 20.165 15.125 7.766 5.663 MuHd_100 : 12.345 11.060 5.258 3.693 MuHd_105 : 9.195 6.413 3.393 1.897 Hmax_075 : -2.217 12.717 -0.115 2.870 Hmax_095 : -0.700 9.188 0.577 3.299 Hmax_100 : 0.100 9.900 -0.629 2.250 Hmax_105 : 0.933 11.900 0.976 3.092 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8675 0.1325 DFMC : 0.8890 0.1110
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 371 PcyM_1301900 MCVRVYYNIDINVLKKKYNCEQILNNEKLRRGMINKKNYMPIIYESAENGKENKAPQKIKVIQVCLWGLKPYNYGKLGKE 80 ILLINAREESLQSKKSFNVLINKNRCAVVVNGYFEWMYIKGSSKRIPYFVFFGKDDDSSDEITEGKLETNIEKLAVEKTE 160 EKSEEKIIPRIKENRVTIRIRVKKEIESDENKKGEIKKEEKEEEEVKEEEEEESPSNEEESAIVDRGAPKRKKEGKEKSN 240 KKKIKTELPSEADLEEDDEEEKSHVIIAGLYSISKTDKKDCRYTIITTACENATLRDINDRCPLLLSENTLNLWLDVEKK 320 YEDIIESIKEEHQVVLNTLKYREVKSWTDYATKSKRAKKAAKVAIAKQAKK 400 ................................................................................ 80 ................................................................................ 160 .......................P........................................................ 240 ................................................................................ 320 ................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PcyM_1301900 4 ---MCVR|VY 0.074 . PcyM_1301900 15 IDINVLK|KK 0.065 . PcyM_1301900 16 DINVLKK|KY 0.093 . PcyM_1301900 17 INVLKKK|YN 0.142 . PcyM_1301900 28 QILNNEK|LR 0.053 . PcyM_1301900 30 LNNEKLR|RG 0.087 . PcyM_1301900 31 NNEKLRR|GM 0.144 . PcyM_1301900 36 RRGMINK|KN 0.065 . PcyM_1301900 37 RGMINKK|NY 0.104 . PcyM_1301900 51 ESAENGK|EN 0.062 . PcyM_1301900 54 ENGKENK|AP 0.065 . PcyM_1301900 58 ENKAPQK|IK 0.062 . PcyM_1301900 60 KAPQKIK|VI 0.077 . PcyM_1301900 70 VCLWGLK|PY 0.056 . PcyM_1301900 76 KPYNYGK|LG 0.063 . PcyM_1301900 79 NYGKLGK|EI 0.060 . PcyM_1301900 87 ILLINAR|EE 0.070 . PcyM_1301900 94 EESLQSK|KS 0.073 . PcyM_1301900 95 ESLQSKK|SF 0.112 . PcyM_1301900 103 FNVLINK|NR 0.059 . PcyM_1301900 105 VLINKNR|CA 0.105 . PcyM_1301900 120 FEWMYIK|GS 0.070 . PcyM_1301900 124 YIKGSSK|RI 0.057 . PcyM_1301900 125 IKGSSKR|IP 0.193 . PcyM_1301900 134 YFVFFGK|DD 0.072 . PcyM_1301900 146 DEITEGK|LE 0.061 . PcyM_1301900 153 LETNIEK|LA 0.059 . PcyM_1301900 158 EKLAVEK|TE 0.065 . PcyM_1301900 162 VEKTEEK|SE 0.079 . PcyM_1301900 166 EEKSEEK|II 0.059 . PcyM_1301900 170 EEKIIPR|IK 0.081 . PcyM_1301900 172 KIIPRIK|EN 0.061 . PcyM_1301900 175 PRIKENR|VT 0.102 . PcyM_1301900 179 ENRVTIR|IR 0.102 . PcyM_1301900 181 RVTIRIR|VK 0.092 . PcyM_1301900 183 TIRIRVK|KE 0.063 . PcyM_1301900 184 IRIRVKK|EI 0.510 *ProP* PcyM_1301900 192 IESDENK|KG 0.066 . PcyM_1301900 193 ESDENKK|GE 0.104 . PcyM_1301900 197 NKKGEIK|KE 0.068 . PcyM_1301900 198 KKGEIKK|EE 0.113 . PcyM_1301900 201 EIKKEEK|EE 0.062 . PcyM_1301900 207 KEEEEVK|EE 0.064 . PcyM_1301900 226 ESAIVDR|GA 0.118 . PcyM_1301900 230 VDRGAPK|RK 0.061 . PcyM_1301900 231 DRGAPKR|KK 0.322 . PcyM_1301900 232 RGAPKRK|KE 0.116 . PcyM_1301900 233 GAPKRKK|EG 0.080 . PcyM_1301900 236 KRKKEGK|EK 0.085 . PcyM_1301900 238 KKEGKEK|SN 0.113 . PcyM_1301900 241 GKEKSNK|KK 0.066 . PcyM_1301900 242 KEKSNKK|KI 0.139 . PcyM_1301900 243 EKSNKKK|IK 0.146 . PcyM_1301900 245 SNKKKIK|TE 0.091 . PcyM_1301900 262 EDDEEEK|SH 0.060 . PcyM_1301900 275 GLYSISK|TD 0.054 . PcyM_1301900 278 SISKTDK|KD 0.070 . PcyM_1301900 279 ISKTDKK|DC 0.116 . PcyM_1301900 282 TDKKDCR|YT 0.116 . PcyM_1301900 296 CENATLR|DI 0.113 . PcyM_1301900 301 LRDINDR|CP 0.068 . PcyM_1301900 319 LWLDVEK|KY 0.072 . PcyM_1301900 320 WLDVEKK|YE 0.125 . PcyM_1301900 329 DIIESIK|EE 0.061 . PcyM_1301900 340 VVLNTLK|YR 0.059 . PcyM_1301900 342 LNTLKYR|EV 0.116 . PcyM_1301900 345 LKYREVK|SW 0.251 . PcyM_1301900 353 WTDYATK|SK 0.073 . PcyM_1301900 355 DYATKSK|RA 0.067 . PcyM_1301900 356 YATKSKR|AK 0.196 . PcyM_1301900 358 TKSKRAK|KA 0.114 . PcyM_1301900 359 KSKRAKK|AA 0.465 . PcyM_1301900 362 RAKKAAK|VA 0.085 . PcyM_1301900 367 AKVAIAK|QA 0.076 . PcyM_1301900 370 AIAKQAK|K- 0.074 . PcyM_1301900 371 IAKQAKK|-- 0.101 . ____________________________^_________________

  • Fasta :-

    >PcyM_1301900 ATGTGTGTACGAGTATACTACAATATCGACATAAACGTTTTGAAAAAAAAGTACAACTGC GAGCAAATTCTGAACAATGAAAAATTAAGGAGAGGAATGATAAATAAGAAAAATTACATG CCCATTATCTACGAGAGCGCTGAAAATGGAAAAGAAAACAAAGCCCCACAAAAAATCAAA GTAATTCAAGTTTGCCTATGGGGACTAAAGCCATACAACTACGGAAAACTCGGCAAGGAA ATTCTTTTGATTAACGCGAGAGAGGAGAGCCTACAATCGAAGAAGTCGTTCAACGTGCTA ATCAATAAGAATCGATGCGCCGTTGTGGTTAACGGCTACTTCGAATGGATGTACATCAAG GGCTCCTCAAAAAGAATCCCATATTTTGTATTTTTTGGAAAGGATGACGATTCTTCTGAT GAAATAACCGAAGGAAAACTCGAAACGAATATTGAGAAATTAGCTGTGGAAAAAACAGAA GAAAAGAGCGAAGAAAAAATTATCCCCAGAATAAAGGAAAACAGAGTGACCATTAGAATT AGGGTAAAGAAAGAAATAGAGTCGGATGAAAACAAAAAAGGCGAGATTAAGAAGGAAGAG AAAGAAGAAGAGGAAGTAAAGGAGGAAGAAGAAGAAGAGTCCCCGAGCAATGAAGAAGAA TCGGCGATAGTGGATAGGGGCGCTCCAAAAAGAAAAAAAGAAGGAAAGGAAAAGAGTAAT AAAAAAAAAATTAAAACAGAGTTACCCAGCGAAGCAGATCTGGAGGAAGATGACGAAGAG GAGAAGTCCCATGTAATAATTGCAGGCCTTTACAGCATCTCGAAGACGGACAAAAAGGAT TGCAGATACACCATAATCACAACCGCTTGCGAGAATGCCACCCTGAGAGACATCAACGAC AGATGCCCCCTTTTGCTGAGCGAAAACACCCTAAACTTGTGGCTGGACGTGGAGAAAAAA TACGAAGACATTATAGAAAGTATCAAGGAGGAGCACCAAGTTGTTTTGAACACCTTGAAG TATAGGGAAGTTAAGAGCTGGACTGATTATGCAACAAAATCGAAAAGGGCCAAGAAAGCC GCTAAGGTAGCCATTGCAAAGCAGGCAAAGAAATAA
  • Download Fasta

  • Fasta :-

    MCVRVYYNIDINVLKKKYNCEQILNNEKLRRGMINKKNYMPIIYESAENGKENKAPQKIK VIQVCLWGLKPYNYGKLGKEILLINAREESLQSKKSFNVLINKNRCAVVVNGYFEWMYIK GSSKRIPYFVFFGKDDDSSDEITEGKLETNIEKLAVEKTEEKSEEKIIPRIKENRVTIRI RVKKEIESDENKKGEIKKEEKEEEEVKEEEEEESPSNEEESAIVDRGAPKRKKEGKEKSN KKKIKTELPSEADLEEDDEEEKSHVIIAGLYSISKTDKKDCRYTIITTACENATLRDIND RCPLLLSENTLNLWLDVEKKYEDIIESIKEEHQVVLNTLKYREVKSWTDYATKSKRAKKA AKVAIAKQAKK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1301900163 STEEKSEEKI0.991unspPcyM_1301900163 STEEKSEEKI0.991unspPcyM_1301900163 STEEKSEEKI0.991unspPcyM_1301900214 SEEEESPSNE0.994unspPcyM_1301900216 SEESPSNEEE0.995unspPcyM_1301900250 STELPSEADL0.992unspPcyM_1301900346 SREVKSWTDY0.995unspPcyM_1301900138 SKDDDSSDEI0.993unspPcyM_1301900139 SDDDSSDEIT0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India