PcyM_1317000 | methionine aminopeptidase 2, putative

_IDPredictionOTHERSPmTPCS_Position
PcyM_1317000OTHER0.9999840.0000000.000016
No Results

  • Fasta :-

    >PcyM_1317000 MNRSNRGGAKGSTTSAKKKPTQSNEKSKGAVGGGVPTPGNKTTTQQKNEKRECPDVQAVN KETPSEGAMNKADANKAANNKAATNKAAANKAANNKTAANKPPANKPPANKGNGDKTPAK KGKKKVDKLDLILNEFKSEVNQGGPSQNGQHGAEGEDAAVEAEEKHKIDFDEFEIERIKK NITLKEHLMEEQNNSHIRLLNNWPQVERSIQTSPATVPIEMVYQGENYPVGEIQNYKHVL SGKTLQEKKEVEKLNSDYYEDLRKAAECHRQVRKYIQTYIQPGRKMIDIVKETEKKTKEL ILSHKLNCGWGFPTGCSLNHCAAHYTPNYGDETVLKYDDVCKLDFGVHVNGYIIDCAFTI AFNEKYDNLIKATQDGTNTGIREAGIDARMCDIGEAIQEAIESYELELNQKTYPIKAISN LRGHSINKYIIHGGKCVPIVKQKEKNEIMEEGELFAIETFASTGKGYVTHDNECSHYMRN PDKQFVPIRLNSAKTLLKVINDNFDTLPFCHRWLDDLGQKRHFMALKTLVDLNIVEAYPP LCDVKNSFTSQMEHTILLRPTCKEVLSRGPDF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1317000.fa Sequence name : PcyM_1317000 Sequence length : 572 VALUES OF COMPUTED PARAMETERS Coef20 : 3.736 CoefTot : -3.778 ChDiff : 6 ZoneTo : 48 KR : 10 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.741 1.212 0.054 0.554 MesoH : -0.826 0.032 -0.426 0.180 MuHd_075 : 18.392 14.943 6.260 4.409 MuHd_095 : 45.521 18.948 12.333 8.649 MuHd_100 : 41.994 15.840 10.272 8.027 MuHd_105 : 29.112 11.245 7.094 5.681 Hmax_075 : 6.300 2.450 0.124 0.870 Hmax_095 : 8.800 0.500 0.390 1.680 Hmax_100 : 4.000 -0.000 -1.396 1.220 Hmax_105 : 0.000 -0.117 -0.119 0.350 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5438 0.4562 DFMC : 0.6503 0.3497
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 572 PcyM_1317000 MNRSNRGGAKGSTTSAKKKPTQSNEKSKGAVGGGVPTPGNKTTTQQKNEKRECPDVQAVNKETPSEGAMNKADANKAANN 80 KAATNKAAANKAANNKTAANKPPANKPPANKGNGDKTPAKKGKKKVDKLDLILNEFKSEVNQGGPSQNGQHGAEGEDAAV 160 EAEEKHKIDFDEFEIERIKKNITLKEHLMEEQNNSHIRLLNNWPQVERSIQTSPATVPIEMVYQGENYPVGEIQNYKHVL 240 SGKTLQEKKEVEKLNSDYYEDLRKAAECHRQVRKYIQTYIQPGRKMIDIVKETEKKTKELILSHKLNCGWGFPTGCSLNH 320 CAAHYTPNYGDETVLKYDDVCKLDFGVHVNGYIIDCAFTIAFNEKYDNLIKATQDGTNTGIREAGIDARMCDIGEAIQEA 400 IESYELELNQKTYPIKAISNLRGHSINKYIIHGGKCVPIVKQKEKNEIMEEGELFAIETFASTGKGYVTHDNECSHYMRN 480 PDKQFVPIRLNSAKTLLKVINDNFDTLPFCHRWLDDLGQKRHFMALKTLVDLNIVEAYPPLCDVKNSFTSQMEHTILLRP 560 TCKEVLSRGPDF 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1317000 3 ----MNR|SN 0.154 . PcyM_1317000 6 -MNRSNR|GG 0.400 . PcyM_1317000 10 SNRGGAK|GS 0.079 . PcyM_1317000 17 GSTTSAK|KK 0.071 . PcyM_1317000 18 STTSAKK|KP 0.080 . PcyM_1317000 19 TTSAKKK|PT 0.189 . PcyM_1317000 26 PTQSNEK|SK 0.103 . PcyM_1317000 28 QSNEKSK|GA 0.108 . PcyM_1317000 41 VPTPGNK|TT 0.062 . PcyM_1317000 47 KTTTQQK|NE 0.057 . PcyM_1317000 50 TQQKNEK|RE 0.064 . PcyM_1317000 51 QQKNEKR|EC 0.205 . PcyM_1317000 61 DVQAVNK|ET 0.067 . PcyM_1317000 71 SEGAMNK|AD 0.061 . PcyM_1317000 76 NKADANK|AA 0.076 . PcyM_1317000 81 NKAANNK|AA 0.073 . PcyM_1317000 86 NKAATNK|AA 0.074 . PcyM_1317000 91 NKAAANK|AA 0.077 . PcyM_1317000 96 NKAANNK|TA 0.073 . PcyM_1317000 101 NKTAANK|PP 0.060 . PcyM_1317000 106 NKPPANK|PP 0.060 . PcyM_1317000 111 NKPPANK|GN 0.085 . PcyM_1317000 116 NKGNGDK|TP 0.061 . PcyM_1317000 120 GDKTPAK|KG 0.066 . PcyM_1317000 121 DKTPAKK|GK 0.097 . PcyM_1317000 123 TPAKKGK|KK 0.101 . PcyM_1317000 124 PAKKGKK|KV 0.132 . PcyM_1317000 125 AKKGKKK|VD 0.086 . PcyM_1317000 128 GKKKVDK|LD 0.062 . PcyM_1317000 137 LILNEFK|SE 0.067 . PcyM_1317000 165 AVEAEEK|HK 0.059 . PcyM_1317000 167 EAEEKHK|ID 0.071 . PcyM_1317000 177 DEFEIER|IK 0.065 . PcyM_1317000 179 FEIERIK|KN 0.058 . PcyM_1317000 180 EIERIKK|NI 0.322 . PcyM_1317000 185 KKNITLK|EH 0.065 . PcyM_1317000 198 QNNSHIR|LL 0.113 . PcyM_1317000 208 NWPQVER|SI 0.144 . PcyM_1317000 237 GEIQNYK|HV 0.074 . PcyM_1317000 243 KHVLSGK|TL 0.067 . PcyM_1317000 248 GKTLQEK|KE 0.059 . PcyM_1317000 249 KTLQEKK|EV 0.131 . PcyM_1317000 253 EKKEVEK|LN 0.068 . PcyM_1317000 263 DYYEDLR|KA 0.078 . PcyM_1317000 264 YYEDLRK|AA 0.085 . PcyM_1317000 270 KAAECHR|QV 0.154 . PcyM_1317000 273 ECHRQVR|KY 0.282 . PcyM_1317000 274 CHRQVRK|YI 0.120 . PcyM_1317000 284 TYIQPGR|KM 0.097 . PcyM_1317000 285 YIQPGRK|MI 0.100 . PcyM_1317000 291 KMIDIVK|ET 0.067 . PcyM_1317000 295 IVKETEK|KT 0.060 . PcyM_1317000 296 VKETEKK|TK 0.095 . PcyM_1317000 298 ETEKKTK|EL 0.065 . PcyM_1317000 305 ELILSHK|LN 0.063 . PcyM_1317000 336 GDETVLK|YD 0.069 . PcyM_1317000 342 KYDDVCK|LD 0.061 . PcyM_1317000 365 TIAFNEK|YD 0.075 . PcyM_1317000 371 KYDNLIK|AT 0.069 . PcyM_1317000 382 GTNTGIR|EA 0.119 . PcyM_1317000 389 EAGIDAR|MC 0.138 . PcyM_1317000 411 ELELNQK|TY 0.054 . PcyM_1317000 416 QKTYPIK|AI 0.080 . PcyM_1317000 422 KAISNLR|GH 0.084 . PcyM_1317000 428 RGHSINK|YI 0.086 . PcyM_1317000 435 YIIHGGK|CV 0.070 . PcyM_1317000 441 KCVPIVK|QK 0.071 . PcyM_1317000 443 VPIVKQK|EK 0.071 . PcyM_1317000 445 IVKQKEK|NE 0.069 . PcyM_1317000 465 TFASTGK|GY 0.067 . PcyM_1317000 479 ECSHYMR|NP 0.121 . PcyM_1317000 483 YMRNPDK|QF 0.073 . PcyM_1317000 489 KQFVPIR|LN 0.105 . PcyM_1317000 494 IRLNSAK|TL 0.081 . PcyM_1317000 498 SAKTLLK|VI 0.069 . PcyM_1317000 512 TLPFCHR|WL 0.100 . PcyM_1317000 520 LDDLGQK|RH 0.060 . PcyM_1317000 521 DDLGQKR|HF 0.151 . PcyM_1317000 527 RHFMALK|TL 0.061 . PcyM_1317000 545 PPLCDVK|NS 0.065 . PcyM_1317000 559 EHTILLR|PT 0.078 . PcyM_1317000 563 LLRPTCK|EV 0.077 . PcyM_1317000 568 CKEVLSR|GP 0.093 . ____________________________^_________________

  • Fasta :-

    >PcyM_1317000 ATGAACAGGAGCAACAGGGGGGGGGCGAAGGGCAGCACCACCAGCGCGAAGAAGAAACCT ACACAAAGCAATGAAAAGAGTAAGGGCGCCGTAGGCGGCGGGGTCCCCACCCCAGGGAAT AAAACGACAACCCAGCAGAAGAACGAAAAGAGGGAGTGCCCCGATGTGCAGGCGGTGAAC AAGGAAACTCCCAGTGAGGGGGCGATGAACAAAGCAGATGCCAATAAAGCGGCAAACAAC AAAGCGGCCACCAACAAAGCTGCTGCCAACAAAGCGGCAAACAACAAAACTGCTGCCAAC AAACCGCCCGCCAACAAACCGCCCGCCAACAAAGGAAACGGCGACAAGACCCCCGCGAAG AAGGGCAAGAAGAAGGTGGACAAGCTGGACCTCATTCTGAACGAATTCAAAAGCGAAGTA AACCAAGGGGGACCCTCCCAAAATGGTCAGCACGGAGCAGAAGGCGAAGATGCAGCGGTA GAGGCGGAGGAGAAACACAAAATAGACTTTGACGAATTCGAAATTGAAAGAATAAAAAAA AACATCACTCTGAAGGAACACCTAATGGAGGAACAAAATAATAGCCACATTAGATTACTA AACAATTGGCCCCAAGTAGAAAGGAGCATACAAACCAGTCCAGCAACGGTACCAATAGAA ATGGTTTACCAAGGGGAGAATTACCCAGTCGGAGAAATTCAAAACTATAAACATGTACTT AGTGGAAAAACACTGCAAGAAAAAAAAGAGGTGGAAAAATTGAATTCGGATTATTATGAA GATTTAAGAAAAGCTGCAGAGTGTCATAGGCAAGTTAGGAAATACATACAGACGTATATC CAACCGGGAAGAAAAATGATTGACATAGTAAAAGAGACAGAGAAAAAAACGAAAGAGTTG ATTTTATCTCATAAATTAAATTGTGGATGGGGATTTCCAACAGGGTGCTCATTAAATCAT TGCGCAGCTCATTACACTCCAAATTATGGAGATGAAACTGTTTTAAAATATGATGATGTA TGCAAGTTAGATTTTGGAGTACATGTTAATGGTTACATAATCGACTGTGCTTTTACCATT GCCTTTAACGAAAAGTACGATAATCTTATTAAGGCTACTCAAGATGGAACAAACACAGGT ATTAGAGAGGCAGGAATTGATGCCAGAATGTGTGACATAGGAGAAGCAATTCAAGAAGCT ATTGAGTCATACGAACTGGAATTAAACCAAAAGACTTATCCCATTAAAGCCATTTCAAAT CTCAGAGGACACTCCATTAATAAGTATATTATTCATGGGGGGAAGTGTGTCCCCATTGTC AAACAGAAAGAAAAAAATGAAATAATGGAAGAAGGAGAACTATTTGCCATCGAAACCTTT GCGTCTACTGGAAAGGGTTATGTTACTCACGACAATGAGTGTTCCCATTACATGAGAAAT CCAGACAAACAATTTGTTCCCATTAGATTAAATTCTGCAAAGACACTCTTAAAAGTTATT AATGATAATTTTGATACCCTCCCATTTTGTCATAGATGGTTGGATGACTTGGGACAAAAG AGGCATTTTATGGCCCTAAAAACGCTCGTAGATTTAAACATCGTGGAGGCATATCCCCCT CTTTGTGATGTGAAGAACTCCTTTACGTCTCAAATGGAGCACACCATTTTGCTGCGCCCG ACATGTAAGGAGGTTTTGTCTCGGGGCCCAGATTTCTGA
  • Download Fasta

  • Fasta :-

    MNRSNRGGAKGSTTSAKKKPTQSNEKSKGAVGGGVPTPGNKTTTQQKNEKRECPDVQAVN KETPSEGAMNKADANKAANNKAATNKAAANKAANNKTAANKPPANKPPANKGNGDKTPAK KGKKKVDKLDLILNEFKSEVNQGGPSQNGQHGAEGEDAAVEAEEKHKIDFDEFEIERIKK NITLKEHLMEEQNNSHIRLLNNWPQVERSIQTSPATVPIEMVYQGENYPVGEIQNYKHVL SGKTLQEKKEVEKLNSDYYEDLRKAAECHRQVRKYIQTYIQPGRKMIDIVKETEKKTKEL ILSHKLNCGWGFPTGCSLNHCAAHYTPNYGDETVLKYDDVCKLDFGVHVNGYIIDCAFTI AFNEKYDNLIKATQDGTNTGIREAGIDARMCDIGEAIQEAIESYELELNQKTYPIKAISN LRGHSINKYIIHGGKCVPIVKQKEKNEIMEEGELFAIETFASTGKGYVTHDNECSHYMRN PDKQFVPIRLNSAKTLLKVINDNFDTLPFCHRWLDDLGQKRHFMALKTLVDLNIVEAYPP LCDVKNSFTSQMEHTILLRPTCKEVLSRGPDF

  • title: active site
  • coordinates: H324,D344,D355,H424,E458,E553
No Results
No Results
IDSitePeptideScoreMethod
PcyM_1317000550 SNSFTSQMEH0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India