PcyM_1322200 | aspartyl protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PcyM_1322200OTHER0.8217680.1454080.032824
No Results

  • Fasta :-

    >PcyM_1322200 MPPRRFQKLGSKLLSTLLIHPTASLLFVVHLFLFRQGSCVRPSATSRFATDLTWEEETNL DMPTCDACDVCSMCIHEKGSSENIIPMVAIPSKRKYLQDKIGKIKSELLKNLPEQKLKKK KKKGCYSFFEGEDEAQGEGEEEMMMMKKKRKRKEKEEDEEDEEEDSPSDQAIDNQIFHHN KGNHYGGEDKHHDEFPNCVTSDCHMSNGASGHPDSLAHFMDGSGEKAQARWSSWSSAFKK KEVLSSTDKVTLPLQQLQDSQYVGYIQIGSPPQTIRPIFDTGSTNIWVVSTKCKDDTCLK VHRYNYKLSRSFRYYKPLTNLDIMFGTGIIQGVIGVENFRIGPFKVFNQPFGLVKSEKRS EAKSNVFERINFEGIVGLAFPAMLSTGKTTIYENLMNTYKFSHNEFSIYIGKDNKHSALI FGGVERRFFEGDIYMFPVVREYYWEIEFDGLYIDHQKFCCDSSSIVYNLRKKKKKWKVQR NSFARKYLKKKTHLMDMSRAWHHRREGAQVDSEEEEEDPSGEDLSGEYQHGGDKNGGHST RGEVNLYGAHPEKRHRKGAHRRRRRRHRWRRHLRRVNRRGKDKKLKKNKNYLIFDSGTSY NSVPKSEIEYFFKVVPPKKCDDSNIDEVVTSYPNLTYVINNMPFTLTPAQYLVRKSDMCK PAFMEIEVSPEYGHAYILGNATFMRYYYTVYRRGDGHKSSYVGIAKAVHAEDNEEYLTAL QRKMNQMG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1322200.fa Sequence name : PcyM_1322200 Sequence length : 728 VALUES OF COMPUTED PARAMETERS Coef20 : 4.083 CoefTot : 0.342 ChDiff : 20 ZoneTo : 50 KR : 7 DE : 0 CleavSite : 49 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.812 1.976 0.224 0.730 MesoH : -0.402 0.377 -0.272 0.206 MuHd_075 : 27.065 23.946 8.507 6.617 MuHd_095 : 41.740 24.816 11.657 10.522 MuHd_100 : 37.016 20.319 9.938 9.560 MuHd_105 : 32.646 14.859 8.205 7.735 Hmax_075 : 14.900 20.700 3.705 4.086 Hmax_095 : 18.700 17.325 3.702 6.388 Hmax_100 : 14.100 11.500 1.922 5.220 Hmax_105 : 14.100 11.500 1.922 5.050 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0943 0.9057 DFMC : 0.0714 0.9286 This protein is probably imported in mitochondria. f(Ser) = 0.1200 f(Arg) = 0.1000 CMi = 0.57143 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 728 PcyM_1322200 MPPRRFQKLGSKLLSTLLIHPTASLLFVVHLFLFRQGSCVRPSATSRFATDLTWEEETNLDMPTCDACDVCSMCIHEKGS 80 SENIIPMVAIPSKRKYLQDKIGKIKSELLKNLPEQKLKKKKKKGCYSFFEGEDEAQGEGEEEMMMMKKKRKRKEKEEDEE 160 DEEEDSPSDQAIDNQIFHHNKGNHYGGEDKHHDEFPNCVTSDCHMSNGASGHPDSLAHFMDGSGEKAQARWSSWSSAFKK 240 KEVLSSTDKVTLPLQQLQDSQYVGYIQIGSPPQTIRPIFDTGSTNIWVVSTKCKDDTCLKVHRYNYKLSRSFRYYKPLTN 320 LDIMFGTGIIQGVIGVENFRIGPFKVFNQPFGLVKSEKRSEAKSNVFERINFEGIVGLAFPAMLSTGKTTIYENLMNTYK 400 FSHNEFSIYIGKDNKHSALIFGGVERRFFEGDIYMFPVVREYYWEIEFDGLYIDHQKFCCDSSSIVYNLRKKKKKWKVQR 480 NSFARKYLKKKTHLMDMSRAWHHRREGAQVDSEEEEEDPSGEDLSGEYQHGGDKNGGHSTRGEVNLYGAHPEKRHRKGAH 560 RRRRRRHRWRRHLRRVNRRGKDKKLKKNKNYLIFDSGTSYNSVPKSEIEYFFKVVPPKKCDDSNIDEVVTSYPNLTYVIN 640 NMPFTLTPAQYLVRKSDMCKPAFMEIEVSPEYGHAYILGNATFMRYYYTVYRRGDGHKSSYVGIAKAVHAEDNEEYLTAL 720 QRKMNQMG 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...P......P..................................................................... 640 ................................................................................ 720 ........ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ PcyM_1322200 4 ---MPPR|RF 0.084 . PcyM_1322200 5 --MPPRR|FQ 0.126 . PcyM_1322200 8 PPRRFQK|LG 0.198 . PcyM_1322200 12 FQKLGSK|LL 0.062 . PcyM_1322200 35 VHLFLFR|QG 0.084 . PcyM_1322200 41 RQGSCVR|PS 0.088 . PcyM_1322200 47 RPSATSR|FA 0.189 . PcyM_1322200 78 SMCIHEK|GS 0.074 . PcyM_1322200 93 MVAIPSK|RK 0.060 . PcyM_1322200 94 VAIPSKR|KY 0.139 . PcyM_1322200 95 AIPSKRK|YL 0.101 . PcyM_1322200 100 RKYLQDK|IG 0.064 . PcyM_1322200 103 LQDKIGK|IK 0.065 . PcyM_1322200 105 DKIGKIK|SE 0.067 . PcyM_1322200 110 IKSELLK|NL 0.064 . PcyM_1322200 116 KNLPEQK|LK 0.058 . PcyM_1322200 118 LPEQKLK|KK 0.069 . PcyM_1322200 119 PEQKLKK|KK 0.111 . PcyM_1322200 120 EQKLKKK|KK 0.093 . PcyM_1322200 121 QKLKKKK|KK 0.121 . PcyM_1322200 122 KLKKKKK|KG 0.141 . PcyM_1322200 123 LKKKKKK|GC 0.171 . PcyM_1322200 147 EEMMMMK|KK 0.058 . PcyM_1322200 148 EMMMMKK|KR 0.100 . PcyM_1322200 149 MMMMKKK|RK 0.121 . PcyM_1322200 150 MMMKKKR|KR 0.328 . PcyM_1322200 151 MMKKKRK|RK 0.136 . PcyM_1322200 152 MKKKRKR|KE 0.176 . PcyM_1322200 153 KKKRKRK|EK 0.426 . PcyM_1322200 155 KRKRKEK|EE 0.221 . PcyM_1322200 181 QIFHHNK|GN 0.081 . PcyM_1322200 190 HYGGEDK|HH 0.062 . PcyM_1322200 226 MDGSGEK|AQ 0.058 . PcyM_1322200 230 GEKAQAR|WS 0.115 . PcyM_1322200 239 SWSSAFK|KK 0.069 . PcyM_1322200 240 WSSAFKK|KE 0.094 . PcyM_1322200 241 SSAFKKK|EV 0.214 . PcyM_1322200 249 VLSSTDK|VT 0.060 . PcyM_1322200 276 SPPQTIR|PI 0.138 . PcyM_1322200 292 IWVVSTK|CK 0.067 . PcyM_1322200 294 VVSTKCK|DD 0.076 . PcyM_1322200 300 KDDTCLK|VH 0.051 . PcyM_1322200 303 TCLKVHR|YN 0.099 . PcyM_1322200 307 VHRYNYK|LS 0.063 . PcyM_1322200 310 YNYKLSR|SF 0.126 . PcyM_1322200 313 KLSRSFR|YY 0.477 . PcyM_1322200 316 RSFRYYK|PL 0.129 . PcyM_1322200 340 IGVENFR|IG 0.068 . PcyM_1322200 345 FRIGPFK|VF 0.070 . PcyM_1322200 355 QPFGLVK|SE 0.077 . PcyM_1322200 358 GLVKSEK|RS 0.073 . PcyM_1322200 359 LVKSEKR|SE 0.217 . PcyM_1322200 363 EKRSEAK|SN 0.086 . PcyM_1322200 369 KSNVFER|IN 0.160 . PcyM_1322200 388 AMLSTGK|TT 0.060 . PcyM_1322200 400 NLMNTYK|FS 0.072 . PcyM_1322200 412 FSIYIGK|DN 0.069 . PcyM_1322200 415 YIGKDNK|HS 0.062 . PcyM_1322200 426 IFGGVER|RF 0.086 . PcyM_1322200 427 FGGVERR|FF 0.184 . PcyM_1322200 440 YMFPVVR|EY 0.080 . PcyM_1322200 457 LYIDHQK|FC 0.067 . PcyM_1322200 470 SIVYNLR|KK 0.077 . PcyM_1322200 471 IVYNLRK|KK 0.075 . PcyM_1322200 472 VYNLRKK|KK 0.080 . PcyM_1322200 473 YNLRKKK|KK 0.384 . PcyM_1322200 474 NLRKKKK|KW 0.179 . PcyM_1322200 475 LRKKKKK|WK 0.136 . PcyM_1322200 477 KKKKKWK|VQ 0.071 . PcyM_1322200 480 KKWKVQR|NS 0.101 . PcyM_1322200 485 QRNSFAR|KY 0.131 . PcyM_1322200 486 RNSFARK|YL 0.177 . PcyM_1322200 489 FARKYLK|KK 0.065 . PcyM_1322200 490 ARKYLKK|KT 0.116 . PcyM_1322200 491 RKYLKKK|TH 0.083 . PcyM_1322200 499 HLMDMSR|AW 0.101 . PcyM_1322200 504 SRAWHHR|RE 0.196 . PcyM_1322200 505 RAWHHRR|EG 0.165 . PcyM_1322200 534 YQHGGDK|NG 0.065 . PcyM_1322200 541 NGGHSTR|GE 0.089 . PcyM_1322200 553 YGAHPEK|RH 0.065 . PcyM_1322200 554 GAHPEKR|HR 0.203 . PcyM_1322200 556 HPEKRHR|KG 0.078 . PcyM_1322200 557 PEKRHRK|GA 0.380 . PcyM_1322200 561 HRKGAHR|RR 0.078 . PcyM_1322200 562 RKGAHRR|RR 0.137 . PcyM_1322200 563 KGAHRRR|RR 0.114 . PcyM_1322200 564 GAHRRRR|RR 0.549 *ProP* PcyM_1322200 565 AHRRRRR|RH 0.349 . PcyM_1322200 566 HRRRRRR|HR 0.453 . PcyM_1322200 568 RRRRRHR|WR 0.375 . PcyM_1322200 570 RRRHRWR|RH 0.089 . PcyM_1322200 571 RRHRWRR|HL 0.693 *ProP* PcyM_1322200 574 RWRRHLR|RV 0.411 . PcyM_1322200 575 WRRHLRR|VN 0.180 . PcyM_1322200 578 HLRRVNR|RG 0.208 . PcyM_1322200 579 LRRVNRR|GK 0.352 . PcyM_1322200 581 RVNRRGK|DK 0.145 . PcyM_1322200 583 NRRGKDK|KL 0.077 . PcyM_1322200 584 RRGKDKK|LK 0.105 . PcyM_1322200 586 GKDKKLK|KN 0.064 . PcyM_1322200 587 KDKKLKK|NK 0.097 . PcyM_1322200 589 KKLKKNK|NY 0.063 . PcyM_1322200 605 SYNSVPK|SE 0.085 . PcyM_1322200 613 EIEYFFK|VV 0.069 . PcyM_1322200 618 FKVVPPK|KC 0.073 . PcyM_1322200 619 KVVPPKK|CD 0.101 . PcyM_1322200 654 PAQYLVR|KS 0.086 . PcyM_1322200 655 AQYLVRK|SD 0.112 . PcyM_1322200 660 RKSDMCK|PA 0.090 . PcyM_1322200 685 GNATFMR|YY 0.143 . PcyM_1322200 692 YYYTVYR|RG 0.076 . PcyM_1322200 693 YYTVYRR|GD 0.138 . PcyM_1322200 698 RRGDGHK|SS 0.097 . PcyM_1322200 706 SYVGIAK|AV 0.091 . PcyM_1322200 722 YLTALQR|KM 0.079 . PcyM_1322200 723 LTALQRK|MN 0.104 . ____________________________^_________________

  • Fasta :-

    >PcyM_1322200 ATGCCCCCCCGCCGTTTCCAAAAACTGGGGAGCAAACTCCTCTCGACCTTGTTAATTCAC CCAACGGCATCCCTCCTGTTCGTAGTACATCTTTTCCTTTTTAGACAAGGTAGTTGTGTA CGGCCTAGTGCCACCTCCAGATTCGCAACTGACCTAACATGGGAGGAAGAGACGAACTTG GATATGCCTACGTGTGACGCGTGCGACGTTTGTTCTATGTGCATACATGAGAAGGGATCG TCTGAGAACATAATCCCCATGGTGGCCATCCCCAGCAAGCGCAAATATCTCCAAGACAAA ATTGGCAAAATAAAATCAGAGCTTCTAAAAAATTTACCTGAACAGAAATTGAAGAAAAAA AAGAAAAAAGGATGTTACAGTTTTTTTGAAGGGGAAGACGAAGCCCAGGGGGAGGGGGAG GAGGAGATGATGATGATGAAGAAGAAAAGGAAGAGGAAGGAGAAGGAGGAGGATGAGGAG GATGAGGAGGAAGATTCCCCTTCCGACCAGGCGATAGACAACCAGATTTTCCATCATAAC AAAGGAAACCATTACGGGGGGGAAGACAAGCACCACGATGAGTTTCCAAATTGCGTCACT TCGGACTGTCACATGAGTAACGGTGCTTCTGGACATCCTGATTCCCTTGCGCACTTTATG GATGGCTCGGGGGAGAAGGCCCAGGCACGGTGGAGCAGTTGGAGCAGCGCGTTTAAAAAG AAGGAGGTTTTGTCCTCTACCGACAAAGTGACCCTACCCCTGCAGCAGTTGCAAGACAGC CAATACGTCGGGTACATCCAAATAGGCAGCCCGCCGCAAACAATCAGACCCATTTTTGAC ACCGGGAGCACGAACATCTGGGTCGTCAGCACCAAGTGCAAGGATGACACATGTCTGAAG GTGCACCGGTACAACTACAAGTTGTCTCGGAGCTTCCGCTACTACAAGCCGCTCACGAAT CTGGACATCATGTTCGGCACGGGAATAATCCAAGGCGTGATCGGCGTGGAAAACTTCCGC ATAGGGCCCTTCAAGGTGTTCAACCAACCCTTCGGACTCGTAAAAAGCGAGAAAAGGAGC GAAGCAAAATCAAACGTCTTTGAGAGAATCAACTTCGAAGGAATAGTCGGACTGGCATTC CCAGCAATGCTATCCACAGGAAAGACAACCATCTATGAAAACCTAATGAACACGTATAAA TTCAGCCATAACGAGTTCTCTATATATATAGGAAAGGATAATAAACACTCAGCTTTAATT TTCGGAGGAGTGGAGAGACGCTTTTTCGAAGGAGACATTTATATGTTCCCAGTGGTGAGA GAATACTACTGGGAAATAGAATTTGATGGACTGTACATCGATCACCAGAAATTTTGTTGC GACTCCAGTTCCATTGTTTACAACTTGAGAAAGAAAAAAAAAAAATGGAAAGTACAAAGA AATTCCTTTGCGAGGAAATACTTGAAAAAAAAAACTCACTTGATGGACATGTCGAGGGCT TGGCACCACCGTCGGGAAGGCGCACAAGTGGACTCAGAGGAAGAGGAGGAAGACCCATCG GGGGAAGATCTCTCAGGGGAGTACCAACATGGGGGAGACAAAAATGGAGGGCATTCCACC AGGGGCGAAGTGAACCTGTATGGTGCTCACCCGGAAAAAAGGCACCGTAAAGGGGCACAC CGTCGACGGCGCAGACGACACAGGTGGAGAAGACACCTCCGCAGAGTCAACCGGAGGGGC AAGGACAAGAAATTAAAGAAAAACAAAAACTACCTCATTTTCGATTCTGGGACCTCCTAC AATAGTGTCCCTAAGTCGGAGATCGAGTACTTCTTCAAGGTCGTCCCACCGAAGAAATGT GACGACAGCAACATAGACGAAGTAGTGACGAGTTACCCCAACCTGACCTACGTCATTAAC AACATGCCCTTCACGCTGACGCCGGCGCAGTACCTGGTCCGGAAGTCCGACATGTGCAAG CCGGCGTTCATGGAAATCGAAGTTTCGCCTGAATATGGCCACGCGTACATTTTGGGGAAT GCGACCTTCATGCGATACTACTACACCGTTTACAGGCGCGGAGATGGGCACAAGAGCTCC TACGTGGGCATTGCCAAGGCAGTGCACGCGGAAGACAATGAGGAGTATCTGACCGCCCTG CAGAGAAAGATGAACCAAATGGGGTAG
  • Download Fasta

  • Fasta :-

    MPPRRFQKLGSKLLSTLLIHPTASLLFVVHLFLFRQGSCVRPSATSRFATDLTWEEETNL DMPTCDACDVCSMCIHEKGSSENIIPMVAIPSKRKYLQDKIGKIKSELLKNLPEQKLKKK KKKGCYSFFEGEDEAQGEGEEEMMMMKKKRKRKEKEEDEEDEEEDSPSDQAIDNQIFHHN KGNHYGGEDKHHDEFPNCVTSDCHMSNGASGHPDSLAHFMDGSGEKAQARWSSWSSAFKK KEVLSSTDKVTLPLQQLQDSQYVGYIQIGSPPQTIRPIFDTGSTNIWVVSTKCKDDTCLK VHRYNYKLSRSFRYYKPLTNLDIMFGTGIIQGVIGVENFRIGPFKVFNQPFGLVKSEKRS EAKSNVFERINFEGIVGLAFPAMLSTGKTTIYENLMNTYKFSHNEFSIYIGKDNKHSALI FGGVERRFFEGDIYMFPVVREYYWEIEFDGLYIDHQKFCCDSSSIVYNLRKKKKKWKVQR NSFARKYLKKKTHLMDMSRAWHHRREGAQVDSEEEEEDPSGEDLSGEYQHGGDKNGGHST RGEVNLYGAHPEKRHRKGAHRRRRRRHRWRRHLRRVNRRGKDKKLKKNKNYLIFDSGTSY NSVPKSEIEYFFKVVPPKKCDDSNIDEVVTSYPNLTYVINNMPFTLTPAQYLVRKSDMCK PAFMEIEVSPEYGHAYILGNATFMRYYYTVYRRGDGHKSSYVGIAKAVHAEDNEEYLTAL QRKMNQMG

    No Results
  • title: Active site flap
  • coordinates: D322,I323,M324,F325,I329,I330,Q331,G332
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1322200356 SGLVKSEKRS0.993unspPcyM_1322200356 SGLVKSEKRS0.993unspPcyM_1322200356 SGLVKSEKRS0.993unspPcyM_1322200512 SAQVDSEEEE0.996unspPcyM_1322200520 SEEDPSGEDL0.997unspPcyM_1322200539 SNGGHSTRGE0.995unspPcyM_1322200606 SSVPKSEIEY0.993unspPcyM_1322200623 SKCDDSNIDE0.994unspPcyM_1322200166 SEEEDSPSDQ0.998unspPcyM_1322200245 SKEVLSSTDK0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India