PcyM_1345900 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PcyM_1345900OTHER0.9986380.0001330.001229
No Results

  • Fasta :-

    >PcyM_1345900 MISSSKIAYEYVSCTKGRTFIVYSKNLPSNGSTTCNSSTCSLHRDTNSTSNHEKAIVLLL HGLNGGTHQYEKLMNSLVHVNHAFISLDFYGHGNSVLSQNLNKFTERLYTEQIYDVLRNK NILDATFIIVAFSMGCIIATHLSAENKIHIKKLCLISAAGLAKPRHRFLIFLLKYNIRIC LRLAKKYSHLMISEDSVKNEYYNFENNVEDAMKRYSVLRENHEKFIETFLKVLTGIKIQD SKKHYSALLKTNVDILFIYGKEDKLTPYSYTVKFLEKKKKYVQNVKMIILPECCHLVIHE KYGELIQHLLYFLQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1345900.fa Sequence name : PcyM_1345900 Sequence length : 314 VALUES OF COMPUTED PARAMETERS Coef20 : 4.320 CoefTot : -0.662 ChDiff : 14 ZoneTo : 44 KR : 5 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.047 2.276 0.423 0.772 MesoH : -0.506 0.738 -0.323 0.237 MuHd_075 : 17.873 16.307 5.859 4.621 MuHd_095 : 27.248 14.671 8.467 5.812 MuHd_100 : 24.138 13.676 7.159 5.720 MuHd_105 : 19.295 13.136 6.743 4.849 Hmax_075 : 8.400 12.600 0.755 4.503 Hmax_095 : 10.800 7.500 2.675 3.130 Hmax_100 : 13.000 7.400 3.417 4.600 Hmax_105 : 4.400 12.133 2.217 2.196 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8212 0.1788 DFMC : 0.6963 0.3037
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 314 PcyM_1345900 MISSSKIAYEYVSCTKGRTFIVYSKNLPSNGSTTCNSSTCSLHRDTNSTSNHEKAIVLLLHGLNGGTHQYEKLMNSLVHV 80 NHAFISLDFYGHGNSVLSQNLNKFTERLYTEQIYDVLRNKNILDATFIIVAFSMGCIIATHLSAENKIHIKKLCLISAAG 160 LAKPRHRFLIFLLKYNIRICLRLAKKYSHLMISEDSVKNEYYNFENNVEDAMKRYSVLRENHEKFIETFLKVLTGIKIQD 240 SKKHYSALLKTNVDILFIYGKEDKLTPYSYTVKFLEKKKKYVQNVKMIILPECCHLVIHEKYGELIQHLLYFLQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .......................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1345900 6 -MISSSK|IA 0.064 . PcyM_1345900 16 EYVSCTK|GR 0.058 . PcyM_1345900 18 VSCTKGR|TF 0.100 . PcyM_1345900 25 TFIVYSK|NL 0.061 . PcyM_1345900 44 STCSLHR|DT 0.102 . PcyM_1345900 54 STSNHEK|AI 0.086 . PcyM_1345900 72 GTHQYEK|LM 0.058 . PcyM_1345900 103 LSQNLNK|FT 0.076 . PcyM_1345900 107 LNKFTER|LY 0.093 . PcyM_1345900 118 QIYDVLR|NK 0.081 . PcyM_1345900 120 YDVLRNK|NI 0.063 . PcyM_1345900 147 HLSAENK|IH 0.075 . PcyM_1345900 151 ENKIHIK|KL 0.062 . PcyM_1345900 152 NKIHIKK|LC 0.086 . PcyM_1345900 163 SAAGLAK|PR 0.068 . PcyM_1345900 165 AGLAKPR|HR 0.079 . PcyM_1345900 167 LAKPRHR|FL 0.106 . PcyM_1345900 174 FLIFLLK|YN 0.061 . PcyM_1345900 178 LLKYNIR|IC 0.069 . PcyM_1345900 182 NIRICLR|LA 0.086 . PcyM_1345900 185 ICLRLAK|KY 0.123 . PcyM_1345900 186 CLRLAKK|YS 0.093 . PcyM_1345900 198 ISEDSVK|NE 0.058 . PcyM_1345900 213 NVEDAMK|RY 0.065 . PcyM_1345900 214 VEDAMKR|YS 0.144 . PcyM_1345900 219 KRYSVLR|EN 0.119 . PcyM_1345900 224 LRENHEK|FI 0.105 . PcyM_1345900 231 FIETFLK|VL 0.063 . PcyM_1345900 237 KVLTGIK|IQ 0.055 . PcyM_1345900 242 IKIQDSK|KH 0.061 . PcyM_1345900 243 KIQDSKK|HY 0.145 . PcyM_1345900 250 HYSALLK|TN 0.071 . PcyM_1345900 261 ILFIYGK|ED 0.055 . PcyM_1345900 264 IYGKEDK|LT 0.058 . PcyM_1345900 273 PYSYTVK|FL 0.082 . PcyM_1345900 277 TVKFLEK|KK 0.062 . PcyM_1345900 278 VKFLEKK|KK 0.087 . PcyM_1345900 279 KFLEKKK|KY 0.097 . PcyM_1345900 280 FLEKKKK|YV 0.209 . PcyM_1345900 286 KYVQNVK|MI 0.062 . PcyM_1345900 301 HLVIHEK|YG 0.073 . ____________________________^_________________

  • Fasta :-

    >PcyM_1345900 ATGATTTCATCAAGCAAAATAGCATACGAATATGTTAGTTGCACAAAGGGGCGCACCTTT ATAGTATACTCAAAGAACTTACCATCGAATGGGAGCACGACATGTAACAGCTCCACGTGC TCTTTACACCGAGATACCAATTCCACTAGCAACCATGAAAAGGCAATCGTGCTTCTTCTG CACGGGTTAAATGGGGGCACTCACCAGTACGAGAAGTTGATGAATTCTTTGGTTCACGTT AACCACGCGTTTATATCGCTAGACTTCTACGGCCACGGAAATAGCGTCCTTTCGCAGAAC CTGAACAAATTTACAGAGCGCTTATACACAGAACAAATTTATGACGTTTTAAGGAACAAA AATATTTTAGATGCAACCTTCATTATTGTCGCCTTTTCCATGGGGTGTATCATAGCTACA CACCTATCTGCAGAGAATAAAATACACATAAAGAAACTCTGCTTAATCAGTGCGGCGGGA CTGGCCAAACCGAGGCACCGATTCTTAATCTTCCTGCTAAAGTACAACATACGTATTTGC CTGAGACTGGCGAAGAAGTACAGCCATTTGATGATCTCCGAGGACTCGGTAAAGAATGAA TATTACAACTTTGAGAATAACGTAGAAGATGCGATGAAACGGTACTCAGTACTCCGAGAA AATCATGAAAAGTTCATTGAGACATTTCTAAAGGTACTGACCGGAATAAAAATCCAAGAT TCGAAGAAGCACTACTCTGCTTTGTTAAAAACGAACGTGGACATCCTTTTCATCTACGGA AAGGAAGATAAACTGACTCCCTACTCTTACACCGTAAAATTTTTGGAAAAAAAAAAGAAA TATGTACAGAATGTGAAAATGATTATTTTACCCGAATGTTGTCACCTCGTTATACATGAG AAGTACGGTGAGTTGATTCAGCACTTGCTCTACTTTTTGCAGTGA
  • Download Fasta

  • Fasta :-

    MISSSKIAYEYVSCTKGRTFIVYSKNLPSNGSTTCNSSTCSLHRDTNSTSNHEKAIVLLL HGLNGGTHQYEKLMNSLVHVNHAFISLDFYGHGNSVLSQNLNKFTERLYTEQIYDVLRNK NILDATFIIVAFSMGCIIATHLSAENKIHIKKLCLISAAGLAKPRHRFLIFLLKYNIRIC LRLAKKYSHLMISEDSVKNEYYNFENNVEDAMKRYSVLRENHEKFIETFLKVLTGIKIQD SKKHYSALLKTNVDILFIYGKEDKLTPYSYTVKFLEKKKKYVQNVKMIILPECCHLVIHE KYGELIQHLLYFLQ

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PcyM_1345900196 SISEDSVKNE0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India