PcyM_1402400 | lysophospholipase, putative

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PcyM_1402400OTHER0.9999390.0000410.000020
No Results

  • Fasta :-

    >PcyM_1402400 MDGYIYYDEDIITPTTTRLDGKPKLGAFFNKDGLLMRTYGWLVRNAIGIIVLIHGLNSHA RLTFLRHNVEIVDNSKAILKDENNYYVYENSWVEHFNNNGYSVYALDLQGHGLSDGWKNL NLNINNFDDLVLDVIQYLNIINDELCLKDKENDSKATCDDVKDFATLCDGDNEGNSDEYN KNVGCNNDARIDKDPQRDYDLQNDNDLQSDNDPQKDNDPQKDNHPQKDNDPPNDNDPQSD NDLQSDNDPQSENDPQKDNDPQSDNDPQSDNDPQSEDDPQSDNDPQRDNDSQSDNEPCCS KECKNNKCSSLPIFIIGQSMGGNIALRTLQLLEKTQNNGKGKLNIQGCISLSSMISFQKI ASPRSYKYKYFYLPFSRLISGFFPTSRFVTKIGFQKYPYLNDLANYDKIRSKNGITLKYW HELLKATSNLEHDMEYIPNDIPILLIHSKDDIFCYYKGVLSFFNRLMNDNKELITLENME HGLTTEPGNEMALENIIDWIAKLDTKKEMAEPLEVN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PcyM_1402400.fa Sequence name : PcyM_1402400 Sequence length : 516 VALUES OF COMPUTED PARAMETERS Coef20 : 3.184 CoefTot : 0.000 ChDiff : -39 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.282 1.547 0.162 0.605 MesoH : -0.551 0.143 -0.393 0.149 MuHd_075 : 23.674 14.244 5.523 4.960 MuHd_095 : 23.328 15.815 5.793 4.607 MuHd_100 : 11.638 14.072 3.125 3.105 MuHd_105 : 3.828 9.682 0.478 0.815 Hmax_075 : 1.225 6.300 -0.753 3.208 Hmax_095 : 2.100 4.700 -0.777 2.850 Hmax_100 : 4.000 9.900 0.277 4.150 Hmax_105 : -5.500 0.700 -2.478 1.598 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9712 0.0288 DFMC : 0.9750 0.0250
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 516 PcyM_1402400 MDGYIYYDEDIITPTTTRLDGKPKLGAFFNKDGLLMRTYGWLVRNAIGIIVLIHGLNSHARLTFLRHNVEIVDNSKAILK 80 DENNYYVYENSWVEHFNNNGYSVYALDLQGHGLSDGWKNLNLNINNFDDLVLDVIQYLNIINDELCLKDKENDSKATCDD 160 VKDFATLCDGDNEGNSDEYNKNVGCNNDARIDKDPQRDYDLQNDNDLQSDNDPQKDNDPQKDNHPQKDNDPPNDNDPQSD 240 NDLQSDNDPQSENDPQKDNDPQSDNDPQSDNDPQSEDDPQSDNDPQRDNDSQSDNEPCCSKECKNNKCSSLPIFIIGQSM 320 GGNIALRTLQLLEKTQNNGKGKLNIQGCISLSSMISFQKIASPRSYKYKYFYLPFSRLISGFFPTSRFVTKIGFQKYPYL 400 NDLANYDKIRSKNGITLKYWHELLKATSNLEHDMEYIPNDIPILLIHSKDDIFCYYKGVLSFFNRLMNDNKELITLENME 480 HGLTTEPGNEMALENIIDWIAKLDTKKEMAEPLEVN 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PcyM_1402400 18 ITPTTTR|LD 0.073 . PcyM_1402400 22 TTRLDGK|PK 0.071 . PcyM_1402400 24 RLDGKPK|LG 0.061 . PcyM_1402400 31 LGAFFNK|DG 0.072 . PcyM_1402400 37 KDGLLMR|TY 0.099 . PcyM_1402400 44 TYGWLVR|NA 0.102 . PcyM_1402400 61 GLNSHAR|LT 0.108 . PcyM_1402400 66 ARLTFLR|HN 0.098 . PcyM_1402400 76 EIVDNSK|AI 0.061 . PcyM_1402400 80 NSKAILK|DE 0.062 . PcyM_1402400 118 GLSDGWK|NL 0.071 . PcyM_1402400 148 NDELCLK|DK 0.061 . PcyM_1402400 150 ELCLKDK|EN 0.064 . PcyM_1402400 155 DKENDSK|AT 0.075 . PcyM_1402400 162 ATCDDVK|DF 0.066 . PcyM_1402400 181 NSDEYNK|NV 0.080 . PcyM_1402400 190 GCNNDAR|ID 0.102 . PcyM_1402400 193 NDARIDK|DP 0.123 . PcyM_1402400 197 IDKDPQR|DY 0.118 . PcyM_1402400 215 SDNDPQK|DN 0.098 . PcyM_1402400 221 KDNDPQK|DN 0.102 . PcyM_1402400 227 KDNHPQK|DN 0.096 . PcyM_1402400 257 SENDPQK|DN 0.095 . PcyM_1402400 287 SDNDPQR|DN 0.158 . PcyM_1402400 301 NEPCCSK|EC 0.055 . PcyM_1402400 304 CCSKECK|NN 0.065 . PcyM_1402400 307 KECKNNK|CS 0.064 . PcyM_1402400 327 GGNIALR|TL 0.094 . PcyM_1402400 334 TLQLLEK|TQ 0.061 . PcyM_1402400 340 KTQNNGK|GK 0.064 . PcyM_1402400 342 QNNGKGK|LN 0.083 . PcyM_1402400 359 SMISFQK|IA 0.066 . PcyM_1402400 364 QKIASPR|SY 0.154 . PcyM_1402400 367 ASPRSYK|YK 0.172 . PcyM_1402400 369 PRSYKYK|YF 0.090 . PcyM_1402400 377 FYLPFSR|LI 0.094 . PcyM_1402400 387 GFFPTSR|FV 0.185 . PcyM_1402400 391 TSRFVTK|IG 0.089 . PcyM_1402400 396 TKIGFQK|YP 0.063 . PcyM_1402400 408 DLANYDK|IR 0.065 . PcyM_1402400 410 ANYDKIR|SK 0.137 . PcyM_1402400 412 YDKIRSK|NG 0.060 . PcyM_1402400 418 KNGITLK|YW 0.082 . PcyM_1402400 425 YWHELLK|AT 0.081 . PcyM_1402400 449 ILLIHSK|DD 0.063 . PcyM_1402400 457 DIFCYYK|GV 0.064 . PcyM_1402400 465 VLSFFNR|LM 0.093 . PcyM_1402400 471 RLMNDNK|EL 0.075 . PcyM_1402400 502 IIDWIAK|LD 0.070 . PcyM_1402400 506 IAKLDTK|KE 0.058 . PcyM_1402400 507 AKLDTKK|EM 0.077 . ____________________________^_________________

  • Fasta :-

    >PcyM_1402400 ATGGATGGATATATTTACTATGACGAAGATATCATAACCCCAACTACTACTAGACTAGAC GGGAAACCAAAACTTGGTGCGTTTTTTAATAAGGATGGTTTATTAATGAGAACGTATGGA TGGTTGGTTCGAAATGCTATAGGTATTATAGTATTGATTCATGGTCTAAATTCACATGCA AGGTTAACCTTTTTAAGGCATAATGTTGAAATCGTGGATAACTCTAAGGCTATATTAAAA GATGAAAACAATTATTACGTGTACGAAAACAGCTGGGTAGAACATTTCAATAATAATGGG TATTCAGTGTATGCCTTAGATTTACAAGGACACGGACTGTCCGATGGGTGGAAAAACTTA AATCTTAATATTAACAACTTTGATGATTTAGTGCTTGACGTAATACAATATCTTAATATA ATTAATGATGAATTATGTTTAAAAGATAAAGAAAATGATTCCAAGGCAACTTGCGATGAC GTTAAGGATTTTGCTACGCTATGTGATGGTGACAATGAAGGTAATAGTGATGAATATAAC AAAAATGTGGGGTGTAATAATGATGCCAGAATTGACAAGGATCCCCAACGTGATTATGAC CTCCAAAACGATAATGATCTTCAAAGCGATAATGATCCCCAAAAGGATAATGATCCCCAA AAGGATAATCATCCCCAAAAGGATAATGATCCCCCAAATGATAATGATCCCCAAAGCGAT AATGATCTTCAAAGCGATAATGATCCCCAAAGCGAGAATGATCCCCAAAAGGATAATGAT CCCCAAAGCGATAATGATCCCCAAAGCGATAATGATCCCCAAAGCGAGGATGATCCCCAA AGCGATAATGATCCCCAAAGAGACAATGATTCCCAAAGCGATAATGAACCCTGCTGTAGT AAAGAATGTAAAAATAATAAATGTTCTTCACTTCCAATATTCATAATTGGTCAATCAATG GGAGGAAATATTGCTTTAAGAACATTACAACTGTTAGAGAAGACACAAAACAATGGGAAA GGAAAATTAAACATTCAAGGATGTATCTCATTATCAAGTATGATTTCTTTTCAGAAAATA GCTTCACCACGTTCATATAAATATAAATATTTTTATTTACCATTTTCAAGATTAATTAGT GGCTTCTTTCCAACGTCAAGATTTGTTACAAAAATTGGATTTCAAAAATATCCCTATCTT AATGATCTTGCTAATTATGATAAAATTCGATCAAAAAATGGGATAACCTTAAAATATTGG CATGAACTTCTAAAAGCAACGAGTAACTTAGAGCATGATATGGAATATATACCCAATGAT ATTCCTATATTGCTAATTCATTCCAAAGATGATATTTTTTGTTATTACAAAGGTGTATTA TCATTTTTTAATAGATTAATGAATGATAATAAAGAATTGATTACGTTAGAAAATATGGAG CACGGGTTGACCACGGAGCCTGGGAACGAAATGGCCTTAGAAAACATCATAGATTGGATT GCAAAATTAGACACAAAAAAAGAAATGGCCGAACCTTTAGAGGTAAACTAA
  • Download Fasta

  • Fasta :-

    MDGYIYYDEDIITPTTTRLDGKPKLGAFFNKDGLLMRTYGWLVRNAIGIIVLIHGLNSHA RLTFLRHNVEIVDNSKAILKDENNYYVYENSWVEHFNNNGYSVYALDLQGHGLSDGWKNL NLNINNFDDLVLDVIQYLNIINDELCLKDKENDSKATCDDVKDFATLCDGDNEGNSDEYN KNVGCNNDARIDKDPQRDYDLQNDNDLQSDNDPQKDNDPQKDNHPQKDNDPPNDNDPQSD NDLQSDNDPQSENDPQKDNDPQSDNDPQSDNDPQSEDDPQSDNDPQRDNDSQSDNEPCCS KECKNNKCSSLPIFIIGQSMGGNIALRTLQLLEKTQNNGKGKLNIQGCISLSSMISFQKI ASPRSYKYKYFYLPFSRLISGFFPTSRFVTKIGFQKYPYLNDLANYDKIRSKNGITLKYW HELLKATSNLEHDMEYIPNDIPILLIHSKDDIFCYYKGVLSFFNRLMNDNKELITLENME HGLTTEPGNEMALENIIDWIAKLDTKKEMAEPLEVN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PcyM_1402400291 SRDNDSQSDN0.996unspPcyM_1402400291 SRDNDSQSDN0.996unspPcyM_1402400291 SRDNDSQSDN0.996unspPcyM_1402400362 SQKIASPRSY0.992unspPcyM_1402400251 SNDPQSENDP0.991unspPcyM_1402400275 SNDPQSEDDP0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India